RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 NWD2Q9ULI1 1742 aa24.66■■□□□ 1.54
SREBF1-211ENST00000476994 SLIT2O94813 1529 aa24.66■■□□□ 1.54
SREBF1-211ENST00000476994 PLEKHG5O94827 1062 aa24.65■■□□□ 1.54
SREBF1-211ENST00000476994 PMFBP1Q8TBY8 1022 aa24.65■■□□□ 1.54
SREBF1-211ENST00000476994 ABCA3Q99758 1704 aa24.65■■□□□ 1.54
SREBF1-211ENST00000476994 PLCH1Q4KWH8 1693 aa24.64■■□□□ 1.53
SREBF1-211ENST00000476994 TMF1P82094 1093 aa24.63■■□□□ 1.53
SREBF1-211ENST00000476994 ITSN1Q15811 1721 aa24.63■■□□□ 1.53
SREBF1-211ENST00000476994 ZNF316A6NFI3 1004 aaPredicted RBP24.62■■□□□ 1.53
SREBF1-211ENST00000476994 SLC24A1O60721 1099 aa24.62■■□□□ 1.53
SREBF1-211ENST00000476994 CCDC125Q86Z20 511 aa24.62■■□□□ 1.53
SREBF1-211ENST00000476994 CCDC7Q96M83 1385 aa24.62■■□□□ 1.53
SREBF1-211ENST00000476994 KIF7Q2M1P5 1343 aa24.61■■□□□ 1.53
SREBF1-211ENST00000476994 WASHC2AQ641Q2 1341 aa24.61■■□□□ 1.53
SREBF1-211ENST00000476994 EVC2Q86UK5 1308 aa24.61■■□□□ 1.53
SREBF1-211ENST00000476994 WASLO00401 505 aaPredicted RBP24.61■■□□□ 1.53
SREBF1-211ENST00000476994 CABLES1Q8TDN4 633 aa24.61■■□□□ 1.53
SREBF1-211ENST00000476994 ATP7BP35670 1465 aa24.61■■□□□ 1.53
SREBF1-211ENST00000476994 CCDC9Q9Y3X0 531 aaKnown RBP24.6■■□□□ 1.53
SREBF1-211ENST00000476994 TRPM3Q9HCF6 1732 aaPredicted RBP24.59■■□□□ 1.53
SREBF1-211ENST00000476994 PUS7Q96PZ0 661 aaKnown RBP24.59■■□□□ 1.53
SREBF1-211ENST00000476994 EP400Q96L91 3159 aa24.59■■□□□ 1.53
SREBF1-211ENST00000476994 GLI3P10071 1580 aa24.59■■□□□ 1.53
SREBF1-211ENST00000476994 NGDNQ8NEJ9 315 aaKnown RBP24.58■■□□□ 1.53
SREBF1-211ENST00000476994 CDK19Q9BWU1 502 aa24.58■■□□□ 1.53
SREBF1-211ENST00000476994 BRWD3Q6RI45 1802 aa24.57■■□□□ 1.52
SREBF1-211ENST00000476994 PRR36Q9H6K5 1346 aa24.57■■□□□ 1.52
SREBF1-211ENST00000476994 VPS72Q15906 364 aa24.56■■□□□ 1.52
SREBF1-211ENST00000476994 ALS2Q96Q42 1657 aa24.56■■□□□ 1.52
SREBF1-211ENST00000476994 CABP2Q9NPB3 220 aa24.55■■□□□ 1.52
SREBF1-211ENST00000476994 AKAP12Q02952 1782 aa24.53■■□□□ 1.52
SREBF1-211ENST00000476994 PAK3O75914 559 aaPredicted RBP24.53■■□□□ 1.52
SREBF1-211ENST00000476994 COL14A1Q05707 1796 aaKnown RBP24.52■■□□□ 1.52
SREBF1-211ENST00000476994 CDCA8Q53HL2 280 aa24.52■■□□□ 1.52
SREBF1-211ENST00000476994 ZRANB1Q9UGI0 708 aa24.52■■□□□ 1.52
SREBF1-211ENST00000476994 SF3B2Q13435 895 aaKnown RBP24.51■■□□□ 1.51
SREBF1-211ENST00000476994 A0A0G2JS52 829 aa24.5■■□□□ 1.51
SREBF1-211ENST00000476994 SRPK2P78362 688 aaKnown RBP24.5■■□□□ 1.51
SREBF1-211ENST00000476994 MYT1Q01538 1121 aa24.5■■□□□ 1.51
SREBF1-211ENST00000476994 SEPT12Q8IYM1 358 aa24.5■■□□□ 1.51
SREBF1-211ENST00000476994 FAM83GA6ND36 823 aa24.48■■□□□ 1.51
SREBF1-211ENST00000476994 BLMP54132 1417 aaPredicted RBP24.48■■□□□ 1.51
SREBF1-211ENST00000476994 MON2Q7Z3U7 1717 aa24.48■■□□□ 1.51
SREBF1-211ENST00000476994 NRAPQ86VF7 1730 aa24.48■■□□□ 1.51
SREBF1-211ENST00000476994 NUDT16Q96DE0 195 aaKnown RBP24.48■■□□□ 1.51
SREBF1-211ENST00000476994 CD163L1Q9NR16 1453 aa24.48■■□□□ 1.51
SREBF1-211ENST00000476994 BTG4Q9NY30 223 aa24.47■■□□□ 1.51
SREBF1-211ENST00000476994 PPIP5K1Q6PFW1 1433 aa24.45■■□□□ 1.51
SREBF1-211ENST00000476994 NINLQ9Y2I6 1382 aa24.45■■□□□ 1.5
SREBF1-211ENST00000476994 CRYBG1Q9Y4K1 1723 aa24.45■■□□□ 1.5
SREBF1-211ENST00000476994 ONECUT3O60422 494 aaPredicted RBP24.44■■□□□ 1.5
SREBF1-211ENST00000476994 KRT27Q7Z3Y8 459 aa24.44■■□□□ 1.5
SREBF1-211ENST00000476994 CCDC61Q9Y6R9 512 aa24.44■■□□□ 1.5
SREBF1-211ENST00000476994 PRDM11Q9NQV5 511 aa24.43■■□□□ 1.5
SREBF1-211ENST00000476994 NRKQ7Z2Y5 1582 aa24.42■■□□□ 1.5
SREBF1-211ENST00000476994 POLR3GLQ9BT43 218 aa24.42■■□□□ 1.5
SREBF1-211ENST00000476994 SLC12A5Q9H2X9 1139 aa24.41■■□□□ 1.5
SREBF1-211ENST00000476994 CPSF1Q10570 1443 aaKnown RBP24.41■■□□□ 1.5
SREBF1-211ENST00000476994 PLEKHG3A1L390 1219 aa24.4■■□□□ 1.5
SREBF1-211ENST00000476994 FAM98CQ17RN3 349 aaKnown RBP24.39■■□□□ 1.49
SREBF1-211ENST00000476994 CABP1Q9NZU7 370 aa24.39■■□□□ 1.49
SREBF1-211ENST00000476994 POLR3AO14802 1390 aaPredicted RBP24.39■■□□□ 1.49
SREBF1-211ENST00000476994 PHRF1Q9P1Y6 1649 aaKnown RBP24.39■■□□□ 1.49
SREBF1-211ENST00000476994 ANKRD36BQ8N2N9 1353 aa24.38■■□□□ 1.49
SREBF1-211ENST00000476994 A0A1W2PP64 1363 aa24.37■■□□□ 1.49
SREBF1-211ENST00000476994 ACEP12821 1306 aa24.36■■□□□ 1.49
SREBF1-211ENST00000476994 TMC1Q8TDI8 760 aa24.35■■□□□ 1.49
SREBF1-211ENST00000476994 DDX10Q13206 875 aaKnown RBP24.34■■□□□ 1.49
SREBF1-211ENST00000476994 SPATA31A5Q5VU36 1347 aa24.34■■□□□ 1.49
SREBF1-211ENST00000476994 SPATA31A7Q8IWB4 1347 aa24.34■■□□□ 1.49
SREBF1-211ENST00000476994 KIAA0232Q92628 1395 aa24.33■■□□□ 1.49
SREBF1-211ENST00000476994 KIF20BQ96Q89 1820 aa24.33■■□□□ 1.48
SREBF1-211ENST00000476994 RGPD1P0DJD0 1748 aa24.32■■□□□ 1.48
SREBF1-211ENST00000476994 BAG6P46379 1132 aa24.32■■□□□ 1.48
SREBF1-211ENST00000476994 NUTM2GQ5VZR2 741 aa24.32■■□□□ 1.48
SREBF1-211ENST00000476994 DEFB132Q7Z7B7 95 aa24.32■■□□□ 1.48
SREBF1-211ENST00000476994 ABTB2Q8N961 1025 aa24.32■■□□□ 1.48
SREBF1-211ENST00000476994 PANK3Q9H999 370 aa24.32■■□□□ 1.48
SREBF1-211ENST00000476994 SSH2Q76I76 1423 aa24.32■■□□□ 1.48
SREBF1-211ENST00000476994 USP6P35125 1406 aa24.31■■□□□ 1.48
SREBF1-211ENST00000476994 CARD14Q9BXL6 1004 aa24.31■■□□□ 1.48
SREBF1-211ENST00000476994 PER1O15534 1290 aaPredicted RBP24.3■■□□□ 1.48
SREBF1-211ENST00000476994 ZC3H6P61129 1189 aaKnown RBP24.3■■□□□ 1.48
SREBF1-211ENST00000476994 SRCAPQ6ZRS2 3230 aa24.29■■□□□ 1.48
SREBF1-211ENST00000476994 EVA1CP58658 441 aa24.29■■□□□ 1.48
SREBF1-211ENST00000476994 CHRNA2Q15822 529 aa24.29■■□□□ 1.48
SREBF1-211ENST00000476994 STRN4Q9NRL3 753 aa24.29■■□□□ 1.48
SREBF1-211ENST00000476994 ANKRD26Q9UPS8 1709 aa24.29■■□□□ 1.48
SREBF1-211ENST00000476994 TERF2IPQ9NYB0 399 aa24.28■■□□□ 1.48
SREBF1-211ENST00000476994 USP54Q70EL1 1684 aa24.27■■□□□ 1.48
SREBF1-211ENST00000476994 THSD7AQ9UPZ6 1657 aa24.27■■□□□ 1.48
SREBF1-211ENST00000476994 NSD3Q9BZ95 1437 aa24.27■■□□□ 1.48
SREBF1-211ENST00000476994 NLRP13Q86W25 1043 aa24.27■■□□□ 1.48
SREBF1-211ENST00000476994 KTN1Q86UP2 1357 aaKnown RBP24.27■■□□□ 1.48
SREBF1-211ENST00000476994 EDC4Q6P2E9 1401 aaKnown RBP24.27■■□□□ 1.48
SREBF1-211ENST00000476994 PIK3C2AO00443 1686 aa24.26■■□□□ 1.47
SREBF1-211ENST00000476994 SPATA31A1Q5TZJ5 1347 aa24.26■■□□□ 1.47
SREBF1-211ENST00000476994 BRD4O60885 1362 aaPredicted RBP24.26■■□□□ 1.47
SREBF1-211ENST00000476994 HDGFL2Q7Z4V5 671 aaPredicted RBP24.25■■□□□ 1.47
SREBF1-211ENST00000476994 ZNF692Q9BU19 519 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms