RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 DCAF8L1A6NGE4 600 aa23.33■■□□□ 1.33
SMG5-204ENST00000476954 KCNQ2O43526 872 aa23.32■■□□□ 1.32
SMG5-204ENST00000476954 RGL3Q3MIN7 710 aa23.32■■□□□ 1.32
SMG5-204ENST00000476954 ZNF784Q8NCA9 323 aaPredicted RBP23.32■■□□□ 1.32
SMG5-204ENST00000476954 SPATA31A1Q5TZJ5 1347 aa23.32■■□□□ 1.32
SMG5-204ENST00000476954 SENP3-EIF4A1A0A087X0R7 540 aa23.31■■□□□ 1.32
SMG5-204ENST00000476954 SAFB2Q14151 953 aaKnown RBP eCLIP23.31■■□□□ 1.32
SMG5-204ENST00000476954 NBPF8Q3BBV2 869 aa23.31■■□□□ 1.32
SMG5-204ENST00000476954 NBPF14Q5TI25 921 aa23.31■■□□□ 1.32
SMG5-204ENST00000476954 PIK3C2GO75747 1445 aa23.28■■□□□ 1.32
SMG5-204ENST00000476954 IFFO2Q5TF58 517 aa23.28■■□□□ 1.32
SMG5-204ENST00000476954 PRDM11Q9NQV5 511 aa23.27■■□□□ 1.32
SMG5-204ENST00000476954 PPARGC1BQ86YN6 1023 aaKnown RBP23.26■■□□□ 1.31
SMG5-204ENST00000476954 SIRT1Q96EB6 747 aa23.26■■□□□ 1.31
SMG5-204ENST00000476954 SLC4A1APQ9BWU0 796 aaKnown RBP23.26■■□□□ 1.31
SMG5-204ENST00000476954 STRN4Q9NRL3 753 aa23.26■■□□□ 1.31
SMG5-204ENST00000476954 SPATA31E1Q6ZUB1 1445 aa23.25■■□□□ 1.31
SMG5-204ENST00000476954 CHRNA2Q15822 529 aa23.25■■□□□ 1.31
SMG5-204ENST00000476954 NRKQ7Z2Y5 1582 aa23.24■■□□□ 1.31
SMG5-204ENST00000476954 USP35Q9P2H5 1018 aa23.24■■□□□ 1.31
SMG5-204ENST00000476954 ANKRD30BQ9BXX2 1392 aa23.24■■□□□ 1.31
SMG5-204ENST00000476954 PRAM1Q96QH2 718 aa23.23■■□□□ 1.31
SMG5-204ENST00000476954 ANKARQ7Z5J8 1434 aa23.23■■□□□ 1.31
SMG5-204ENST00000476954 KIAA0232Q92628 1395 aa23.22■■□□□ 1.31
SMG5-204ENST00000476954 ACIN1Q9UKV3 1341 aaKnown RBP23.21■■□□□ 1.31
SMG5-204ENST00000476954 CASZ1Q86V15 1759 aa23.21■■□□□ 1.31
SMG5-204ENST00000476954 MYOM1P52179 1685 aa23.2■■□□□ 1.3
SMG5-204ENST00000476954 GPRASP1Q5JY77 1395 aa23.2■■□□□ 1.3
SMG5-204ENST00000476954 PDE3BQ13370 1112 aa23.2■■□□□ 1.3
SMG5-204ENST00000476954 PDGFDQ9GZP0 370 aaPredicted RBP23.2■■□□□ 1.3
SMG5-204ENST00000476954 PRR36Q9H6K5 1346 aa23.19■■□□□ 1.3
SMG5-204ENST00000476954 C1QTNF8P60827 252 aa23.18■■□□□ 1.3
SMG5-204ENST00000476954 PHRF1Q9P1Y6 1649 aaKnown RBP23.18■■□□□ 1.3
SMG5-204ENST00000476954 PAK3O75914 559 aaPredicted RBP23.17■■□□□ 1.3
SMG5-204ENST00000476954 CFAP70Q5T0N1 1121 aa23.17■■□□□ 1.3
SMG5-204ENST00000476954 C14orf93Q9H972 538 aaKnown RBP23.17■■□□□ 1.3
SMG5-204ENST00000476954 ANO8Q9HCE9 1232 aaPredicted RBP23.17■■□□□ 1.3
SMG5-204ENST00000476954 HIRIP3Q9BW71 556 aaPredicted RBP23.16■■□□□ 1.3
SMG5-204ENST00000476954 CHD4Q14839 1912 aa23.16■■□□□ 1.3
SMG5-204ENST00000476954 ZC3H6P61129 1189 aaKnown RBP23.15■■□□□ 1.3
SMG5-204ENST00000476954 DHX57Q6P158 1386 aaKnown RBP23.14■■□□□ 1.3
SMG5-204ENST00000476954 BARGINQ6ZT62 677 aa23.14■■□□□ 1.29
SMG5-204ENST00000476954 POGKQ9P215 609 aa23.14■■□□□ 1.29
SMG5-204ENST00000476954 SSH2Q76I76 1423 aa23.14■■□□□ 1.29
SMG5-204ENST00000476954 ZBTB7AO95365 584 aa23.13■■□□□ 1.29
SMG5-204ENST00000476954 NUTM2GQ5VZR2 741 aa23.11■■□□□ 1.29
SMG5-204ENST00000476954 LARP1Q6PKG0 1096 aaKnown RBP23.11■■□□□ 1.29
SMG5-204ENST00000476954 PTGER2P43116 358 aa23.1■■□□□ 1.29
SMG5-204ENST00000476954 NGDNQ8NEJ9 315 aaKnown RBP23.1■■□□□ 1.29
SMG5-204ENST00000476954 SBF2Q86WG5 1849 aa23.1■■□□□ 1.29
SMG5-204ENST00000476954 MINK1Q8N4C8 1332 aaPredicted RBP23.09■■□□□ 1.29
SMG5-204ENST00000476954 DLC1Q96QB1 1528 aa23.09■■□□□ 1.29
SMG5-204ENST00000476954 EVA1CP58658 441 aa23.09■■□□□ 1.29
SMG5-204ENST00000476954 PTF1AQ7RTS3 328 aa23.09■■□□□ 1.29
SMG5-204ENST00000476954 ATF5Q9Y2D1 282 aaPredicted RBP23.09■■□□□ 1.29
SMG5-204ENST00000476954 RGPD3A6NKT7 1758 aaPredicted RBP23.09■■□□□ 1.29
SMG5-204ENST00000476954 RGPD4Q7Z3J3 1758 aa23.09■■□□□ 1.29
SMG5-204ENST00000476954 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.29
SMG5-204ENST00000476954 PEAK1Q9H792 1746 aa23.08■■□□□ 1.29
SMG5-204ENST00000476954 PARP4Q9UKK3 1724 aaKnown RBP23.08■■□□□ 1.28
SMG5-204ENST00000476954 TCP11L2Q8N4U5 519 aa23.07■■□□□ 1.28
SMG5-204ENST00000476954 FHDC1Q9C0D6 1143 aaPredicted RBP23.06■■□□□ 1.28
SMG5-204ENST00000476954 UTRNP46939 3433 aa23.05■■□□□ 1.28
SMG5-204ENST00000476954 SYT17Q9BSW7 474 aa23.05■■□□□ 1.28
SMG5-204ENST00000476954 LMO7Q8WWI1 1683 aa23.04■■□□□ 1.28
SMG5-204ENST00000476954 WASLO00401 505 aaPredicted RBP23.02■■□□□ 1.28
SMG5-204ENST00000476954 PROM2Q8N271 834 aa23.02■■□□□ 1.28
SMG5-204ENST00000476954 BCL11BQ9C0K0 894 aaPredicted RBP23.02■■□□□ 1.28
SMG5-204ENST00000476954 TRAK1Q9UPV9 953 aa23.02■■□□□ 1.28
SMG5-204ENST00000476954 PLSCR1O15162 318 aa23.01■■□□□ 1.27
SMG5-204ENST00000476954 ADGRB1O14514 1584 aa23■■□□□ 1.27
SMG5-204ENST00000476954 EIF3AQ14152 1382 aaKnown RBP23■■□□□ 1.27
SMG5-204ENST00000476954 OVOS2A0A0G2JMS6 1433 aa22.99■■□□□ 1.27
SMG5-204ENST00000476954 OVOS2A0A0J9YW53 1432 aa22.99■■□□□ 1.27
SMG5-204ENST00000476954 OVOS2Q6IE36 1432 aa22.99■■□□□ 1.27
SMG5-204ENST00000476954 LRRC37A3O60309 1634 aa22.98■■□□□ 1.27
SMG5-204ENST00000476954 ITSN1Q15811 1721 aa22.98■■□□□ 1.27
SMG5-204ENST00000476954 ATP7BP35670 1465 aa22.98■■□□□ 1.27
SMG5-204ENST00000476954 THRAP3Q9Y2W1 955 aaKnown RBP22.96■■□□□ 1.27
SMG5-204ENST00000476954 MPHOSPH9Q99550 1183 aa22.95■■□□□ 1.26
SMG5-204ENST00000476954 SGIP1Q9BQI5 828 aa22.95■■□□□ 1.26
SMG5-204ENST00000476954 COL5A2P05997 1499 aaPredicted RBP22.93■■□□□ 1.26
SMG5-204ENST00000476954 GIGYF1O75420 1035 aaPredicted RBP22.93■■□□□ 1.26
SMG5-204ENST00000476954 NUDT16Q96DE0 195 aaKnown RBP22.93■■□□□ 1.26
SMG5-204ENST00000476954 CPDO75976 1380 aa22.92■■□□□ 1.26
SMG5-204ENST00000476954 C11orf95C9JLR9 678 aaPredicted RBP22.91■■□□□ 1.26
SMG5-204ENST00000476954 STK32BQ9NY57 414 aa22.91■■□□□ 1.26
SMG5-204ENST00000476954 CEP350Q5VT06 3117 aa22.91■■□□□ 1.26
SMG5-204ENST00000476954 SLC15A2Q16348 729 aa22.9■■□□□ 1.26
SMG5-204ENST00000476954 MTFR1LQ9H019 292 aa22.9■■□□□ 1.26
SMG5-204ENST00000476954 CRB1P82279 1406 aa22.9■■□□□ 1.26
SMG5-204ENST00000476954 TXNRD1Q16881 649 aa22.89■■□□□ 1.25
SMG5-204ENST00000476954 USP19O94966 1318 aa22.88■■□□□ 1.25
SMG5-204ENST00000476954 WNK3Q9BYP7 1800 aa22.88■■□□□ 1.25
SMG5-204ENST00000476954 DDB1Q16531 1140 aa22.88■■□□□ 1.25
SMG5-204ENST00000476954 MARCH10Q8NA82 808 aaPredicted RBP22.88■■□□□ 1.25
SMG5-204ENST00000476954 TOPAZ1Q8N9V7 1692 aa22.87■■□□□ 1.25
SMG5-204ENST00000476954 ACEP12821 1306 aa22.87■■□□□ 1.25
SMG5-204ENST00000476954 AKAP12Q02952 1782 aa22.87■■□□□ 1.25
SMG5-204ENST00000476954 ZBTB7CA1YPR0 619 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms