RNA–Protein interactions for RNA: ENST00000476535.1

LCLAT1-208, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 4

Gene LCLAT1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-208ENST00000476535 PLEKHG3A1L390 1219 aa25.35■■□□□ 1.65
LCLAT1-208ENST00000476535 ATAD2Q6PL18 1390 aa25.34■■□□□ 1.65
LCLAT1-208ENST00000476535 PLEKHG5O94827 1062 aa25.33■■□□□ 1.65
LCLAT1-208ENST00000476535 COL14A1Q05707 1796 aaKnown RBP25.32■■□□□ 1.64
LCLAT1-208ENST00000476535 PAK3O75914 559 aaPredicted RBP25.32■■□□□ 1.64
LCLAT1-208ENST00000476535 EP400Q96L91 3159 aa25.31■■□□□ 1.64
LCLAT1-208ENST00000476535 FAM83GA6ND36 823 aa25.31■■□□□ 1.64
LCLAT1-208ENST00000476535 VPS72Q15906 364 aa25.31■■□□□ 1.64
LCLAT1-208ENST00000476535 NRAPQ86VF7 1730 aa25.31■■□□□ 1.64
LCLAT1-208ENST00000476535 ACEP12821 1306 aa25.31■■□□□ 1.64
LCLAT1-208ENST00000476535 ROCK2O75116 1388 aaKnown RBP25.31■■□□□ 1.64
LCLAT1-208ENST00000476535 SRPK2P78362 688 aaKnown RBP25.29■■□□□ 1.64
LCLAT1-208ENST00000476535 NBPF8Q3BBV2 869 aa25.29■■□□□ 1.64
LCLAT1-208ENST00000476535 PPIP5K1Q6PFW1 1433 aa25.28■■□□□ 1.64
LCLAT1-208ENST00000476535 PHRF1Q9P1Y6 1649 aaKnown RBP25.27■■□□□ 1.64
LCLAT1-208ENST00000476535 TRIM26Q12899 539 aaPredicted RBP25.27■■□□□ 1.64
LCLAT1-208ENST00000476535 CABP2Q9NPB3 220 aa25.25■■□□□ 1.63
LCLAT1-208ENST00000476535 BRWD3Q6RI45 1802 aa25.24■■□□□ 1.63
LCLAT1-208ENST00000476535 BRD4O60885 1362 aaPredicted RBP25.24■■□□□ 1.63
LCLAT1-208ENST00000476535 EVC2Q86UK5 1308 aa25.23■■□□□ 1.63
LCLAT1-208ENST00000476535 ONECUT3O60422 494 aaPredicted RBP25.22■■□□□ 1.63
LCLAT1-208ENST00000476535 BTG4Q9NY30 223 aa25.22■■□□□ 1.63
LCLAT1-208ENST00000476535 PRDM11Q9NQV5 511 aa25.2■■□□□ 1.62
LCLAT1-208ENST00000476535 CCDC9Q9Y3X0 531 aaKnown RBP25.2■■□□□ 1.62
LCLAT1-208ENST00000476535 TONSLQ96HA7 1378 aa25.19■■□□□ 1.62
LCLAT1-208ENST00000476535 KIAA0232Q92628 1395 aa25.18■■□□□ 1.62
LCLAT1-208ENST00000476535 NRKQ7Z2Y5 1582 aa25.18■■□□□ 1.62
LCLAT1-208ENST00000476535 SEPT12Q8IYM1 358 aa25.18■■□□□ 1.62
LCLAT1-208ENST00000476535 SBNO2Q9Y2G9 1366 aa25.18■■□□□ 1.62
LCLAT1-208ENST00000476535 USP19O94966 1318 aa25.17■■□□□ 1.62
LCLAT1-208ENST00000476535 CCDC125Q86Z20 511 aa25.17■■□□□ 1.62
LCLAT1-208ENST00000476535 ABTB2Q8N961 1025 aa25.17■■□□□ 1.62
LCLAT1-208ENST00000476535 CABP1Q9NZU7 370 aa25.17■■□□□ 1.62
LCLAT1-208ENST00000476535 USP6P35125 1406 aa25.17■■□□□ 1.62
LCLAT1-208ENST00000476535 NUTM2GQ5VZR2 741 aa25.16■■□□□ 1.62
LCLAT1-208ENST00000476535 CPDO75976 1380 aa25.14■■□□□ 1.61
LCLAT1-208ENST00000476535 SPATA31A5Q5VU36 1347 aa25.13■■□□□ 1.61
LCLAT1-208ENST00000476535 SPATA31A7Q8IWB4 1347 aa25.13■■□□□ 1.61
LCLAT1-208ENST00000476535 NLRP13Q86W25 1043 aa25.13■■□□□ 1.61
LCLAT1-208ENST00000476535 AKAP12Q02952 1782 aa25.13■■□□□ 1.61
LCLAT1-208ENST00000476535 SSH2Q76I76 1423 aa25.12■■□□□ 1.61
LCLAT1-208ENST00000476535 ZC3H6P61129 1189 aaKnown RBP25.12■■□□□ 1.61
LCLAT1-208ENST00000476535 CARD11Q9BXL7 1154 aa25.12■■□□□ 1.61
LCLAT1-208ENST00000476535 CHRNA2Q15822 529 aa25.1■■□□□ 1.61
LCLAT1-208ENST00000476535 KRT27Q7Z3Y8 459 aa25.1■■□□□ 1.61
LCLAT1-208ENST00000476535 BLMP54132 1417 aaPredicted RBP25.1■■□□□ 1.61
LCLAT1-208ENST00000476535 LMO7Q8WWI1 1683 aa25.1■■□□□ 1.61
LCLAT1-208ENST00000476535 THSD7AQ9UPZ6 1657 aa25.1■■□□□ 1.61
LCLAT1-208ENST00000476535 FAM98CQ17RN3 349 aaKnown RBP25.09■■□□□ 1.61
LCLAT1-208ENST00000476535 PIK3C2AO00443 1686 aa25.08■■□□□ 1.61
LCLAT1-208ENST00000476535 ZNF692Q9BU19 519 aaPredicted RBP25.08■■□□□ 1.61
LCLAT1-208ENST00000476535 SLIT3O75094 1523 aa25.07■■□□□ 1.6
LCLAT1-208ENST00000476535 GCP02774 474 aa25.07■■□□□ 1.6
LCLAT1-208ENST00000476535 SPATA31A1Q5TZJ5 1347 aa25.07■■□□□ 1.6
LCLAT1-208ENST00000476535 CAMTA1Q9Y6Y1 1673 aa25.06■■□□□ 1.6
LCLAT1-208ENST00000476535 CPSF1Q10570 1443 aaKnown RBP25.05■■□□□ 1.6
LCLAT1-208ENST00000476535 A0A0G2JS52 829 aa25.05■■□□□ 1.6
LCLAT1-208ENST00000476535 MYT1Q01538 1121 aa25.05■■□□□ 1.6
LCLAT1-208ENST00000476535 NLRP6P59044 892 aa25.04■■□□□ 1.6
LCLAT1-208ENST00000476535 STRN4Q9NRL3 753 aa25.03■■□□□ 1.6
LCLAT1-208ENST00000476535 MON2Q7Z3U7 1717 aa25.03■■□□□ 1.6
LCLAT1-208ENST00000476535 TTC21BQ7Z4L5 1316 aa25.02■■□□□ 1.6
LCLAT1-208ENST00000476535 TTC21AQ8NDW8 1320 aa25.02■■□□□ 1.6
LCLAT1-208ENST00000476535 EVA1CP58658 441 aa25■■□□□ 1.59
LCLAT1-208ENST00000476535 COL5A2P05997 1499 aaPredicted RBP24.98■■□□□ 1.59
LCLAT1-208ENST00000476535 AATKQ6ZMQ8 1374 aa24.98■■□□□ 1.59
LCLAT1-208ENST00000476535 KTN1Q86UP2 1357 aaKnown RBP24.98■■□□□ 1.59
LCLAT1-208ENST00000476535 SF3B2Q13435 895 aaKnown RBP24.98■■□□□ 1.59
LCLAT1-208ENST00000476535 BARGINQ6ZT62 677 aa24.98■■□□□ 1.59
LCLAT1-208ENST00000476535 PUS7Q96PZ0 661 aaKnown RBP24.98■■□□□ 1.59
LCLAT1-208ENST00000476535 COL18A1P39060 1754 aa24.97■■□□□ 1.59
LCLAT1-208ENST00000476535 LARP1Q6PKG0 1096 aaKnown RBP24.96■■□□□ 1.59
LCLAT1-208ENST00000476535 CD163L1Q9NR16 1453 aa24.96■■□□□ 1.59
LCLAT1-208ENST00000476535 USP54Q70EL1 1684 aa24.95■■□□□ 1.58
LCLAT1-208ENST00000476535 RGPD1P0DJD0 1748 aa24.95■■□□□ 1.58
LCLAT1-208ENST00000476535 TCP11L2Q8N4U5 519 aa24.94■■□□□ 1.58
LCLAT1-208ENST00000476535 KCNH5Q8NCM2 988 aa24.94■■□□□ 1.58
LCLAT1-208ENST00000476535 THRAP3Q9Y2W1 955 aaKnown RBP24.94■■□□□ 1.58
LCLAT1-208ENST00000476535 ZRANB1Q9UGI0 708 aa24.93■■□□□ 1.58
LCLAT1-208ENST00000476535 SLC24A1O60721 1099 aa24.92■■□□□ 1.58
LCLAT1-208ENST00000476535 DEFB132Q7Z7B7 95 aa24.92■■□□□ 1.58
LCLAT1-208ENST00000476535 TESK2Q96S53 571 aa24.92■■□□□ 1.58
LCLAT1-208ENST00000476535 USP35Q9P2H5 1018 aa24.92■■□□□ 1.58
LCLAT1-208ENST00000476535 NFAT5O94916 1531 aa24.91■■□□□ 1.58
LCLAT1-208ENST00000476535 CRB1P82279 1406 aa24.91■■□□□ 1.58
LCLAT1-208ENST00000476535 USP31Q70CQ4 1352 aa24.91■■□□□ 1.58
LCLAT1-208ENST00000476535 PARP4Q9UKK3 1724 aaKnown RBP24.9■■□□□ 1.58
LCLAT1-208ENST00000476535 ARHGEF25Q86VW2 580 aa24.9■■□□□ 1.58
LCLAT1-208ENST00000476535 ABCC6O95255 1503 aa24.9■■□□□ 1.58
LCLAT1-208ENST00000476535 CLSPNQ9HAW4 1339 aa24.89■■□□□ 1.58
LCLAT1-208ENST00000476535 ST20-MTHFSA0A0A6YYL1 179 aa24.89■■□□□ 1.58
LCLAT1-208ENST00000476535 HDGFL2Q7Z4V5 671 aaPredicted RBP24.89■■□□□ 1.58
LCLAT1-208ENST00000476535 TMC1Q8TDI8 760 aa24.89■■□□□ 1.58
LCLAT1-208ENST00000476535 NINLQ9Y2I6 1382 aa24.89■■□□□ 1.57
LCLAT1-208ENST00000476535 TNS1Q9HBL0 1735 aaKnown RBP24.89■■□□□ 1.57
LCLAT1-208ENST00000476535 SRCAPQ6ZRS2 3230 aa24.88■■□□□ 1.57
LCLAT1-208ENST00000476535 EDC4Q6P2E9 1401 aaKnown RBP24.88■■□□□ 1.57
LCLAT1-208ENST00000476535 ZBTB7CA1YPR0 619 aa24.88■■□□□ 1.57
LCLAT1-208ENST00000476535 BAG6P46379 1132 aa24.88■■□□□ 1.57
LCLAT1-208ENST00000476535 FAM182BQ5T319 152 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms