RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 ANKRD18BA2A2Z9 1011 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 VDRP11473 427 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 MAGEA8P43361 318 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 GTF2A1P52655 376 aaPredicted RBP4.69□□□□□ -1.66
LSM2-211ENST00000475835 RIPK4P57078 832 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 HDLBPQ00341 1268 aaKnown RBP4.69□□□□□ -1.66
LSM2-211ENST00000475835 NFKBIBQ15653 356 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 ICE2Q659A1 982 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 ATL2Q8NHH9 583 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 TBC1D22AQ8WUA7 517 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 CFAP53Q96M91 514 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 IRF2BPLQ9H1B7 796 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 PNMA2Q9UL42 364 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 PHF8Q9UPP1 1060 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 KIF27Q86VH2 1401 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 CCNB3Q8WWL7 1395 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 CTTNBP2Q8WZ74 1663 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 ANKRD33BA6NCL7 494 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 CBFA2T2O43439 604 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 CREB3O43889 395 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 GUCY2CP25092 1073 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 ABCD1P33897 745 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 FLT3P36888 993 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 KCNJ4P48050 445 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 BARGINQ6ZT62 677 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 AMOTL1Q8IY63 956 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 CCDC82Q8N4S0 544 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 GOLGA6L1Q8N7Z2 621 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 ACRBPQ8NEB7 543 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 KCNV2Q8TDN2 545 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 MICAL1Q8TDZ2 1067 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 DRC1Q96MC2 740 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 IGSF5Q9NSI5 407 aa4.68□□□□□ -1.66
LSM2-211ENST00000475835 DDX49Q9Y6V7 483 aaKnown RBP4.68□□□□□ -1.66
LSM2-211ENST00000475835 CUX1P39880 1505 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 MAP3K1Q13233 1512 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 PCF11O94913 1555 aaKnown RBP4.67□□□□□ -1.66
LSM2-211ENST00000475835 UNCXA6NJT0 531 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 GOLGA6L6A8MZA4 724 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 GOLGA6L22H0YM25 854 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 PES1O00541 588 aaKnown RBP4.67□□□□□ -1.66
LSM2-211ENST00000475835 KIF4AO95239 1232 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 CT47B1P0C2W7 299 aaPredicted RBP4.67□□□□□ -1.66
LSM2-211ENST00000475835 ITGAEP38570 1179 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 TNNT3P45378 269 aaPredicted RBP4.67□□□□□ -1.66
LSM2-211ENST00000475835 NAP1L1P55209 391 aaKnown RBP4.67□□□□□ -1.66
LSM2-211ENST00000475835 HMGN5P82970 282 aaKnown RBP4.67□□□□□ -1.66
LSM2-211ENST00000475835 KCNA1Q09470 495 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 FILIP1LQ4L180 1135 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 CCDC91Q7Z6B0 441 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 PABPN1Q86U42 306 aaKnown RBP eCLIP4.67□□□□□ -1.66
LSM2-211ENST00000475835 TMC1Q8TDI8 760 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 EVI5LQ96CN4 794 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 ARPC5LQ9BPX5 153 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 POLR3CQ9BUI4 534 aaPredicted RBP4.67□□□□□ -1.66
LSM2-211ENST00000475835 DEF6Q9H4E7 631 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 CHCHD3Q9NX63 227 aaKnown RBP4.67□□□□□ -1.66
LSM2-211ENST00000475835 UTP6Q9NYH9 597 aaKnown RBP4.67□□□□□ -1.66
LSM2-211ENST00000475835 SUN2Q9UH99 717 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 MAPKBP1O60336 1514 aa4.67□□□□□ -1.66
LSM2-211ENST00000475835 KANK1Q14678 1352 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 IBTKQ9P2D0 1353 aaPredicted RBP4.66□□□□□ -1.66
LSM2-211ENST00000475835 SCAPERQ9BY12 1400 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 CCDC189A1A4V9 331 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 FSD2A1L4K1 749 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 H0YHG0 523 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 IPO5O00410 1097 aaKnown RBP4.66□□□□□ -1.66
LSM2-211ENST00000475835 KIF5CO60282 957 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 HMMRO75330 724 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 STK10O94804 968 aaKnown RBP4.66□□□□□ -1.66
LSM2-211ENST00000475835 CAPN2P17655 700 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 CCT2P78371 535 aaKnown RBP4.66□□□□□ -1.66
LSM2-211ENST00000475835 IRX1P78414 480 aaPredicted RBP4.66□□□□□ -1.66
LSM2-211ENST00000475835 AMOTQ4VCS5 1084 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 ANKRD13BQ86YJ7 626 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 SAMD3Q8N6K7 520 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 KLHL23Q8NBE8 558 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 PNISRQ8TF01 805 aaKnown RBP4.66□□□□□ -1.66
LSM2-211ENST00000475835 C22orf23Q9BZE7 217 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 FOXD4L1Q9NU39 408 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 SWAP70Q9UH65 585 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 ARHGAP35Q9NRY4 1499 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 ERBB3P21860 1342 aa4.66□□□□□ -1.66
LSM2-211ENST00000475835 WDR97A6NE52 1622 aa4.65□□□□□ -1.66
LSM2-211ENST00000475835 KIF21AQ7Z4S6 1674 aa4.65□□□□□ -1.66
LSM2-211ENST00000475835 PPFIA2O75334 1257 aa4.65□□□□□ -1.67
LSM2-211ENST00000475835 PEX14O75381 377 aa4.65□□□□□ -1.67
LSM2-211ENST00000475835 HSP90AB1P08238 724 aaKnown RBP4.65□□□□□ -1.67
LSM2-211ENST00000475835 NOP2P46087 812 aaKnown RBP4.65□□□□□ -1.67
LSM2-211ENST00000475835 TRPC1P48995 793 aa4.65□□□□□ -1.67
LSM2-211ENST00000475835 MRE11P49959 708 aa4.65□□□□□ -1.67
LSM2-211ENST00000475835 APLP1P51693 650 aa4.65□□□□□ -1.67
LSM2-211ENST00000475835 POU5F1Q01860 360 aaKnown RBP4.65□□□□□ -1.67
LSM2-211ENST00000475835 IFT88Q13099 833 aa4.65□□□□□ -1.67
LSM2-211ENST00000475835 TMED1Q13445 227 aa4.65□□□□□ -1.67
LSM2-211ENST00000475835 HS1BP3Q53T59 392 aa4.65□□□□□ -1.67
LSM2-211ENST00000475835 JAKMIP3Q5VZ66 844 aa4.65□□□□□ -1.67
LSM2-211ENST00000475835 CCDC73Q6ZRK6 1079 aa4.65□□□□□ -1.67
LSM2-211ENST00000475835 EP400NLQ6ZTU2 488 aa4.65□□□□□ -1.67
LSM2-211ENST00000475835 FAM184AQ8NB25 1140 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms