RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 NALCNQ8IZF0 1738 aa23.89■■□□□ 1.41
VARS2-206ENST00000473916 PDE3BQ13370 1112 aa23.88■■□□□ 1.41
VARS2-206ENST00000473916 NPHP4O75161 1426 aaPredicted RBP23.88■■□□□ 1.41
VARS2-206ENST00000473916 ACEP12821 1306 aa23.88■■□□□ 1.41
VARS2-206ENST00000473916 ZNF521Q96K83 1311 aa23.87■■□□□ 1.41
VARS2-206ENST00000473916 FMN2Q9NZ56 1722 aa23.85■■□□□ 1.41
VARS2-206ENST00000473916 PLEKHG3A1L390 1219 aa23.84■■□□□ 1.41
VARS2-206ENST00000473916 PMFBP1Q8TBY8 1022 aa23.84■■□□□ 1.41
VARS2-206ENST00000473916 ZNF692Q9BU19 519 aaPredicted RBP23.82■■□□□ 1.4
VARS2-206ENST00000473916 POLKQ9UBT6 870 aa23.82■■□□□ 1.4
VARS2-206ENST00000473916 USP6P35125 1406 aa23.82■■□□□ 1.4
VARS2-206ENST00000473916 IQSEC2Q5JU85 1478 aa23.82■■□□□ 1.4
VARS2-206ENST00000473916 U2AF1L5P0DN76 240 aaPredicted RBP23.81■■□□□ 1.4
VARS2-206ENST00000473916 U2AF1Q01081 240 aaKnown RBP eCLIP23.81■■□□□ 1.4
VARS2-206ENST00000473916 RNF123Q5XPI4 1314 aa23.81■■□□□ 1.4
VARS2-206ENST00000473916 PPM1GO15355 546 aaPredicted RBP23.81■■□□□ 1.4
VARS2-206ENST00000473916 RRP7AQ9Y3A4 280 aaKnown RBP23.8■■□□□ 1.4
VARS2-206ENST00000473916 DMRT2Q9Y5R5 561 aa23.8■■□□□ 1.4
VARS2-206ENST00000473916 TTC21BQ7Z4L5 1316 aa23.8■■□□□ 1.4
VARS2-206ENST00000473916 EMILIN1Q9Y6C2 1016 aa23.79■■□□□ 1.4
VARS2-206ENST00000473916 PNPLA6Q8IY17 1366 aa23.79■■□□□ 1.4
VARS2-206ENST00000473916 SPINK5Q9NQ38 1064 aaPredicted RBP23.79■■□□□ 1.4
VARS2-206ENST00000473916 U2SURPO15042 1029 aaKnown RBP23.78■■□□□ 1.4
VARS2-206ENST00000473916 RUNDC1Q96C34 613 aa23.78■■□□□ 1.4
VARS2-206ENST00000473916 COG3Q96JB2 828 aa23.78■■□□□ 1.4
VARS2-206ENST00000473916 NEUROD2Q15784 382 aa23.77■■□□□ 1.4
VARS2-206ENST00000473916 RCAN3Q9UKA8 241 aa23.77■■□□□ 1.4
VARS2-206ENST00000473916 GOLGA2Q08379 1002 aa23.76■■□□□ 1.39
VARS2-206ENST00000473916 SSH2Q76I76 1423 aa23.76■■□□□ 1.39
VARS2-206ENST00000473916 TCP11L2Q8N4U5 519 aa23.76■■□□□ 1.39
VARS2-206ENST00000473916 RRS1Q15050 365 aaKnown RBP23.76■■□□□ 1.39
VARS2-206ENST00000473916 DUSP27Q5VZP5 1158 aa23.76■■□□□ 1.39
VARS2-206ENST00000473916 ANKARQ7Z5J8 1434 aa23.75■■□□□ 1.39
VARS2-206ENST00000473916 DIAPH1O60610 1272 aaKnown RBP23.74■■□□□ 1.39
VARS2-206ENST00000473916 NGDNQ8NEJ9 315 aaKnown RBP23.74■■□□□ 1.39
VARS2-206ENST00000473916 OVOS2A0A0J9YW53 1432 aa23.73■■□□□ 1.39
VARS2-206ENST00000473916 OVOS2Q6IE36 1432 aa23.73■■□□□ 1.39
VARS2-206ENST00000473916 NWD1Q149M9 1564 aa23.73■■□□□ 1.39
VARS2-206ENST00000473916 SLFN5Q08AF3 891 aa23.72■■□□□ 1.39
VARS2-206ENST00000473916 AATKQ6ZMQ8 1374 aa23.72■■□□□ 1.39
VARS2-206ENST00000473916 WWC1Q8IX03 1113 aa23.72■■□□□ 1.39
VARS2-206ENST00000473916 ADGRL3Q9HAR2 1447 aa23.71■■□□□ 1.39
VARS2-206ENST00000473916 PIK3C2AO00443 1686 aa23.71■■□□□ 1.39
VARS2-206ENST00000473916 HSPA2P54652 639 aa23.71■■□□□ 1.39
VARS2-206ENST00000473916 PLEKHF1Q96S99 279 aa23.71■■□□□ 1.39
VARS2-206ENST00000473916 CDK12Q9NYV4 1490 aaPredicted RBP23.7■■□□□ 1.38
VARS2-206ENST00000473916 RRP1P56182 461 aaKnown RBP23.69■■□□□ 1.38
VARS2-206ENST00000473916 LRRC7Q96NW7 1537 aa23.69■■□□□ 1.38
VARS2-206ENST00000473916 KDM4FA0A1W2PPD8 638 aa23.69■■□□□ 1.38
VARS2-206ENST00000473916 TRMT2AQ8IZ69 625 aaKnown RBP23.68■■□□□ 1.38
VARS2-206ENST00000473916 SOX12O15370 315 aa23.67■■□□□ 1.38
VARS2-206ENST00000473916 PEAK1Q9H792 1746 aa23.67■■□□□ 1.38
VARS2-206ENST00000473916 STRCP1A6NGW2 1772 aa23.67■■□□□ 1.38
VARS2-206ENST00000473916 MARF1Q9Y4F3 1742 aaKnown RBP23.66■■□□□ 1.38
VARS2-206ENST00000473916 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
VARS2-206ENST00000473916 C14orf37Q86TY3 774 aa23.66■■□□□ 1.38
VARS2-206ENST00000473916 ERICH6BQ5W0A0 696 aa23.65■■□□□ 1.38
VARS2-206ENST00000473916 NGEFQ8N5V2 710 aa23.65■■□□□ 1.38
VARS2-206ENST00000473916 IL13P35225 146 aa23.64■■□□□ 1.38
VARS2-206ENST00000473916 TTC21AQ8NDW8 1320 aa23.64■■□□□ 1.38
VARS2-206ENST00000473916 PLIN1O60240 522 aa23.64■■□□□ 1.37
VARS2-206ENST00000473916 PPP4R2Q9NY27 417 aa23.63■■□□□ 1.37
VARS2-206ENST00000473916 USP31Q70CQ4 1352 aa23.63■■□□□ 1.37
VARS2-206ENST00000473916 E9PSI1 815 aa23.62■■□□□ 1.37
VARS2-206ENST00000473916 HMOX1P09601 288 aa23.62■■□□□ 1.37
VARS2-206ENST00000473916 NUTM2GQ5VZR2 741 aa23.62■■□□□ 1.37
VARS2-206ENST00000473916 PHF8Q9UPP1 1060 aa23.62■■□□□ 1.37
VARS2-206ENST00000473916 B4GALNT3Q6L9W6 998 aa23.61■■□□□ 1.37
VARS2-206ENST00000473916 RSPH6AQ9H0K4 717 aa23.61■■□□□ 1.37
VARS2-206ENST00000473916 PROSER2Q86WR7 435 aaPredicted RBP23.6■■□□□ 1.37
VARS2-206ENST00000473916 MAPK8IP3Q9UPT6 1336 aa23.6■■□□□ 1.37
VARS2-206ENST00000473916 TMPOP42166 694 aaKnown RBP23.6■■□□□ 1.37
VARS2-206ENST00000473916 PRKAR2BP31323 418 aa23.59■■□□□ 1.37
VARS2-206ENST00000473916 CCDC27Q2M243 656 aa23.59■■□□□ 1.37
VARS2-206ENST00000473916 ESCO1Q5FWF5 840 aa23.59■■□□□ 1.37
VARS2-206ENST00000473916 PAK3O75914 559 aaPredicted RBP23.57■■□□□ 1.36
VARS2-206ENST00000473916 FCHSD2O94868 740 aa23.57■■□□□ 1.36
VARS2-206ENST00000473916 TRIM35Q9UPQ4 493 aa23.57■■□□□ 1.36
VARS2-206ENST00000473916 LMTK3Q96Q04 1460 aa23.57■■□□□ 1.36
VARS2-206ENST00000473916 NLRP6P59044 892 aa23.56■■□□□ 1.36
VARS2-206ENST00000473916 HSP90AB2PQ58FF8 381 aa23.56■■□□□ 1.36
VARS2-206ENST00000473916 PHACTR3Q96KR7 559 aa23.56■■□□□ 1.36
VARS2-206ENST00000473916 ORAI2Q96SN7 254 aa23.56■■□□□ 1.36
VARS2-206ENST00000473916 MAP3K19Q56UN5 1328 aa23.56■■□□□ 1.36
VARS2-206ENST00000473916 USP54Q70EL1 1684 aa23.56■■□□□ 1.36
VARS2-206ENST00000473916 EIF4A2Q14240 407 aaKnown RBP23.55■■□□□ 1.36
VARS2-206ENST00000473916 STRCQ7RTU9 1775 aa23.55■■□□□ 1.36
VARS2-206ENST00000473916 WDR63Q8IWG1 891 aa23.55■■□□□ 1.36
VARS2-206ENST00000473916 EXOC6Q8TAG9 804 aa23.55■■□□□ 1.36
VARS2-206ENST00000473916 RIPK4P57078 832 aa23.53■■□□□ 1.36
VARS2-206ENST00000473916 C20orf194Q5TEA3 1177 aa23.53■■□□□ 1.36
VARS2-206ENST00000473916 ABTB2Q8N961 1025 aa23.53■■□□□ 1.36
VARS2-206ENST00000473916 DLG5Q8TDM6 1919 aa23.52■■□□□ 1.36
VARS2-206ENST00000473916 XPCQ01831 940 aaPredicted RBP23.52■■□□□ 1.36
VARS2-206ENST00000473916 RGPD1P0DJD0 1748 aa23.52■■□□□ 1.36
VARS2-206ENST00000473916 TMEM94Q12767 1356 aa23.51■■□□□ 1.35
VARS2-206ENST00000473916 NCBP3Q53F19 620 aaKnown RBP23.51■■□□□ 1.35
VARS2-206ENST00000473916 AEBP1Q8IUX7 1158 aa23.51■■□□□ 1.35
VARS2-206ENST00000473916 BCAR3O75815 825 aa23.5■■□□□ 1.35
VARS2-206ENST00000473916 PNNQ9H307 717 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms