RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 CCDC61Q9Y6R9 512 aa6.34□□□□□ -1.4
TM4SF1-202ENST00000472441 STRCQ7RTU9 1775 aa6.34□□□□□ -1.4
TM4SF1-202ENST00000472441 ARHGAP23Q9P227 1491 aa6.33□□□□□ -1.4
TM4SF1-202ENST00000472441 MAPK8IP3Q9UPT6 1336 aa6.33□□□□□ -1.4
TM4SF1-202ENST00000472441 CANXP27824 592 aaKnown RBP6.33□□□□□ -1.4
TM4SF1-202ENST00000472441 NGEFQ8N5V2 710 aa6.33□□□□□ -1.4
TM4SF1-202ENST00000472441 FRAT1Q92837 279 aaPredicted RBP6.33□□□□□ -1.4
TM4SF1-202ENST00000472441 USP32Q8NFA0 1604 aa6.33□□□□□ -1.4
TM4SF1-202ENST00000472441 AMOTL2Q9Y2J4 779 aa6.33□□□□□ -1.4
TM4SF1-202ENST00000472441 SHPRHQ149N8 1683 aa6.33□□□□□ -1.4
TM4SF1-202ENST00000472441 ROBO2Q9HCK4 1378 aa6.33□□□□□ -1.4
TM4SF1-202ENST00000472441 NRXN3Q9Y4C0 1643 aa6.33□□□□□ -1.4
TM4SF1-202ENST00000472441 THEMISQ8N1K5 641 aaPredicted RBP6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 BCL11AQ9H165 835 aa6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 POLKQ9UBT6 870 aa6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 EMILIN1Q9Y6C2 1016 aa6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 KNDC1Q76NI1 1749 aa6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 NKTRP30414 1462 aaKnown RBP6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 LMTK3Q96Q04 1460 aa6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 DLC1Q96QB1 1528 aa6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 HMOX1P09601 288 aa6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 RRS1Q15050 365 aaKnown RBP6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 COG3Q96JB2 828 aa6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 BCL2L13Q9BXK5 485 aa6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 SKAP1Q86WV1 359 aa6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 PMFBP1Q8TBY8 1022 aa6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 NWD1Q149M9 1564 aa6.32□□□□□ -1.4
TM4SF1-202ENST00000472441 PRR36Q9H6K5 1346 aa6.31□□□□□ -1.4
TM4SF1-202ENST00000472441 MED14O60244 1454 aa6.31□□□□□ -1.4
TM4SF1-202ENST00000472441 TMPOP42166 694 aaKnown RBP6.31□□□□□ -1.4
TM4SF1-202ENST00000472441 RIPK4P57078 832 aa6.31□□□□□ -1.4
TM4SF1-202ENST00000472441 ADAMTS13Q76LX8 1427 aa6.31□□□□□ -1.4
TM4SF1-202ENST00000472441 WDR63Q8IWG1 891 aa6.31□□□□□ -1.4
TM4SF1-202ENST00000472441 SIRT1Q96EB6 747 aa6.31□□□□□ -1.4
TM4SF1-202ENST00000472441 NEFMP07197 916 aa6.31□□□□□ -1.4
TM4SF1-202ENST00000472441 TSR2Q969E8 191 aaKnown RBP6.31□□□□□ -1.4
TM4SF1-202ENST00000472441 PLEKHG1Q9ULL1 1385 aa6.31□□□□□ -1.4
TM4SF1-202ENST00000472441 PLEKHF1Q96S99 279 aa6.3□□□□□ -1.4
TM4SF1-202ENST00000472441 ZNF692Q9BU19 519 aaPredicted RBP6.3□□□□□ -1.4
TM4SF1-202ENST00000472441 LAS1LQ9Y4W2 734 aaKnown RBP6.3□□□□□ -1.4
TM4SF1-202ENST00000472441 ACEP12821 1306 aa6.3□□□□□ -1.4
TM4SF1-202ENST00000472441 FAM135BQ49AJ0 1406 aa6.3□□□□□ -1.4
TM4SF1-202ENST00000472441 KDM4FA0A1W2PPD8 638 aa6.3□□□□□ -1.4
TM4SF1-202ENST00000472441 PRKAR2BP31323 418 aa6.3□□□□□ -1.4
TM4SF1-202ENST00000472441 PANK1Q8TE04 598 aa6.3□□□□□ -1.4
TM4SF1-202ENST00000472441 PNNQ9H307 717 aaKnown RBP6.3□□□□□ -1.4
TM4SF1-202ENST00000472441 MYH16Q9H6N6 1097 aa6.3□□□□□ -1.4
TM4SF1-202ENST00000472441 COG6Q9Y2V7 657 aa6.3□□□□□ -1.4
TM4SF1-202ENST00000472441 ATP7BP35670 1465 aa6.3□□□□□ -1.4
TM4SF1-202ENST00000472441 EDC4Q6P2E9 1401 aaKnown RBP6.29□□□□□ -1.4
TM4SF1-202ENST00000472441 RARSP54136 660 aaKnown RBP6.29□□□□□ -1.4
TM4SF1-202ENST00000472441 CCDC27Q2M243 656 aa6.29□□□□□ -1.4
TM4SF1-202ENST00000472441 CLUAP1Q96AJ1 413 aa6.29□□□□□ -1.4
TM4SF1-202ENST00000472441 TRIM35Q9UPQ4 493 aa6.29□□□□□ -1.4
TM4SF1-202ENST00000472441 TBX22Q9Y458 520 aa6.29□□□□□ -1.4
TM4SF1-202ENST00000472441 UTRNP46939 3433 aa6.29□□□□□ -1.4
TM4SF1-202ENST00000472441 CPSF1Q10570 1443 aaKnown RBP6.29□□□□□ -1.4
TM4SF1-202ENST00000472441 PTPRUQ92729 1446 aa6.29□□□□□ -1.4
TM4SF1-202ENST00000472441 NGDNQ8NEJ9 315 aaKnown RBP6.29□□□□□ -1.4
TM4SF1-202ENST00000472441 FCHSD2O94868 740 aa6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 EXOSC9Q06265 439 aaKnown RBP6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 PHACTR3Q96KR7 559 aa6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 TNNQ9UQP3 1299 aa6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 TECPR2O15040 1411 aa6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 MAP2P11137 1827 aaKnown RBP6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 KIF20BQ96Q89 1820 aa6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 TTC21BQ7Z4L5 1316 aa6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 IQSEC2Q5JU85 1478 aa6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 CPS1P31327 1500 aa6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 KCNA6P17658 529 aa6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 ANKRD26Q9UPS8 1709 aa6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 THUMPD2Q9BTF0 503 aaKnown RBP6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 RSPH6AQ9H0K4 717 aa6.28□□□□□ -1.4
TM4SF1-202ENST00000472441 COL3A1P02461 1466 aaPredicted RBP6.27□□□□□ -1.41
TM4SF1-202ENST00000472441 PNPLA6Q8IY17 1366 aa6.27□□□□□ -1.41
TM4SF1-202ENST00000472441 TCERG1O14776 1098 aaKnown RBP6.27□□□□□ -1.41
TM4SF1-202ENST00000472441 IL13P35225 146 aa6.27□□□□□ -1.41
TM4SF1-202ENST00000472441 NUTM2GQ5VZR2 741 aa6.27□□□□□ -1.41
TM4SF1-202ENST00000472441 NPM2Q86SE8 214 aaKnown RBP6.27□□□□□ -1.41
TM4SF1-202ENST00000472441 PIAS4Q8N2W9 510 aaPredicted RBP6.27□□□□□ -1.41
TM4SF1-202ENST00000472441 FANCIQ9NVI1 1328 aa6.27□□□□□ -1.41
TM4SF1-202ENST00000472441 XRN1Q8IZH2 1706 aaKnown RBP6.27□□□□□ -1.41
TM4SF1-202ENST00000472441 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.27□□□□□ -1.41
TM4SF1-202ENST00000472441 PLEKHG3A1L390 1219 aa6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 MSH5O43196 834 aa6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 PAK3O75914 559 aaPredicted RBP6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 RGS3P49796 1198 aa6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 PDE3AQ14432 1141 aa6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 C14orf37Q86TY3 774 aa6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 ANKLE2Q86XL3 938 aa6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 SMC4Q9NTJ3 1288 aa6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 CHD2O14647 1828 aaKnown RBP6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 CDC42BPGQ6DT37 1551 aa6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 ZBTB7CA1YPR0 619 aa6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 RLBP1P12271 317 aa6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 ERICH6Q7L0X2 663 aa6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 CENPQQ7L2Z9 268 aaPredicted RBP6.26□□□□□ -1.41
TM4SF1-202ENST00000472441 ELL2O00472 640 aaPredicted RBP6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 PDE4AP27815 886 aa6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 HSP90AB2PQ58FF8 381 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms