RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 PSME1Q06323 249 aa21.48■■□□□ 1.03
CALD1-215ENST00000472096 ARHGEF10O15013 1369 aa21.46■■□□□ 1.03
CALD1-215ENST00000472096 ADAMTS2O95450 1211 aa21.45■■□□□ 1.02
CALD1-215ENST00000472096 CARD11Q9BXL7 1154 aa21.45■■□□□ 1.02
CALD1-215ENST00000472096 AFF2P51816 1311 aa21.45■■□□□ 1.02
CALD1-215ENST00000472096 POLR3AO14802 1390 aaPredicted RBP21.45■■□□□ 1.02
CALD1-215ENST00000472096 ZNF772Q68DY9 489 aaPredicted RBP21.44■■□□□ 1.02
CALD1-215ENST00000472096 NGDNQ8NEJ9 315 aaKnown RBP21.44■■□□□ 1.02
CALD1-215ENST00000472096 C8orf37Q96NL8 207 aa21.44■■□□□ 1.02
CALD1-215ENST00000472096 SBNO2Q9Y2G9 1366 aa21.44■■□□□ 1.02
CALD1-215ENST00000472096 PPIP5K1Q6PFW1 1433 aa21.44■■□□□ 1.02
CALD1-215ENST00000472096 SRPK2P78362 688 aaKnown RBP21.43■■□□□ 1.02
CALD1-215ENST00000472096 CCDC61Q9Y6R9 512 aa21.43■■□□□ 1.02
CALD1-215ENST00000472096 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.43■■□□□ 1.02
CALD1-215ENST00000472096 SOCS7O14512 581 aa21.42■■□□□ 1.02
CALD1-215ENST00000472096 AKAP12Q02952 1782 aa21.42■■□□□ 1.02
CALD1-215ENST00000472096 PLCH1Q4KWH8 1693 aa21.41■■□□□ 1.02
CALD1-215ENST00000472096 EVC2Q86UK5 1308 aa21.41■■□□□ 1.02
CALD1-215ENST00000472096 CABP2Q9NPB3 220 aa21.41■■□□□ 1.02
CALD1-215ENST00000472096 PHRF1Q9P1Y6 1649 aaKnown RBP21.4■■□□□ 1.02
CALD1-215ENST00000472096 ACEP12821 1306 aa21.39■■□□□ 1.01
CALD1-215ENST00000472096 PLEKHG3A1L390 1219 aa21.39■■□□□ 1.01
CALD1-215ENST00000472096 LMOD2Q6P5Q4 547 aa21.38■■□□□ 1.01
CALD1-215ENST00000472096 NGLY1Q96IV0 654 aa21.38■■□□□ 1.01
CALD1-215ENST00000472096 NWD2Q9ULI1 1742 aa21.38■■□□□ 1.01
CALD1-215ENST00000472096 TIMELESSQ9UNS1 1208 aa21.37■■□□□ 1.01
CALD1-215ENST00000472096 CCER1Q8TC90 406 aaPredicted RBP21.35■■□□□ 1.01
CALD1-215ENST00000472096 CABLES1Q8TDN4 633 aa21.35■■□□□ 1.01
CALD1-215ENST00000472096 NRKQ7Z2Y5 1582 aa21.35■■□□□ 1.01
CALD1-215ENST00000472096 MON2Q7Z3U7 1717 aa21.35■■□□□ 1.01
CALD1-215ENST00000472096 ATAD2Q6PL18 1390 aa21.34■■□□□ 1.01
CALD1-215ENST00000472096 SLIT2O94813 1529 aa21.34■■□□□ 1.01
CALD1-215ENST00000472096 NRAPQ86VF7 1730 aa21.33■■□□□ 1.01
CALD1-215ENST00000472096 PAK3O75914 559 aaPredicted RBP21.33■■□□□ 1.01
CALD1-215ENST00000472096 FNBP4Q8N3X1 1017 aaPredicted RBP21.33■■□□□ 1.01
CALD1-215ENST00000472096 COL14A1Q05707 1796 aaKnown RBP21.33■■□□□ 1
CALD1-215ENST00000472096 BCL9LQ86UU0 1499 aa21.32■■□□□ 1
CALD1-215ENST00000472096 CDK12Q9NYV4 1490 aaPredicted RBP21.32■■□□□ 1
CALD1-215ENST00000472096 USP6P35125 1406 aa21.32■■□□□ 1
CALD1-215ENST00000472096 PLEKHG5O94827 1062 aa21.32■■□□□ 1
CALD1-215ENST00000472096 HAP1P54257 671 aaPredicted RBP21.32■■□□□ 1
CALD1-215ENST00000472096 USP21Q9UK80 565 aa21.32■■□□□ 1
CALD1-215ENST00000472096 PIK3C2AO00443 1686 aa21.31■■□□□ 1
CALD1-215ENST00000472096 ATRNO75882 1429 aa21.31■■□□□ 1
CALD1-215ENST00000472096 CABP1Q9NZU7 370 aa21.31■■□□□ 1
CALD1-215ENST00000472096 BRD4O60885 1362 aaPredicted RBP21.3■■□□□ 1
CALD1-215ENST00000472096 USP47Q96K76 1375 aa21.3■■□□□ 1
CALD1-215ENST00000472096 RXRBP28702 533 aa21.29■■□□□ 1
CALD1-215ENST00000472096 POLA2Q14181 598 aa21.29■■□□□ 1
CALD1-215ENST00000472096 QTRT2Q9H974 415 aaKnown RBP21.28■■□□□ 1
CALD1-215ENST00000472096 TESK2Q96S53 571 aa21.27■■□□□ 1
CALD1-215ENST00000472096 RGS12O14924 1447 aa21.27■■□□□ 1
CALD1-215ENST00000472096 SSH2Q76I76 1423 aa21.27■■□□□ 1
CALD1-215ENST00000472096 ST20-MTHFSA0A0A6YYL1 179 aa21.26■□□□□ 0.99
CALD1-215ENST00000472096 TRPC5Q9UL62 973 aaPredicted RBP21.26■□□□□ 0.99
CALD1-215ENST00000472096 CPSF1Q10570 1443 aaKnown RBP21.26■□□□□ 0.99
CALD1-215ENST00000472096 GLI3P10071 1580 aa21.25■□□□□ 0.99
CALD1-215ENST00000472096 RBM6P78332 1123 aaKnown RBP21.25■□□□□ 0.99
CALD1-215ENST00000472096 CD163L1Q9NR16 1453 aa21.24■□□□□ 0.99
CALD1-215ENST00000472096 ABCB7O75027 752 aa21.23■□□□□ 0.99
CALD1-215ENST00000472096 NUTM2GQ5VZR2 741 aa21.23■□□□□ 0.99
CALD1-215ENST00000472096 UNC5CLQ8IV45 518 aa21.23■□□□□ 0.99
CALD1-215ENST00000472096 ABTB2Q8N961 1025 aa21.23■□□□□ 0.99
CALD1-215ENST00000472096 USP54Q70EL1 1684 aa21.23■□□□□ 0.99
CALD1-215ENST00000472096 SLIT3O75094 1523 aa21.23■□□□□ 0.99
CALD1-215ENST00000472096 USP19O94966 1318 aa21.23■□□□□ 0.99
CALD1-215ENST00000472096 FAM83GA6ND36 823 aa21.2■□□□□ 0.98
CALD1-215ENST00000472096 PUS7Q96PZ0 661 aaKnown RBP21.2■□□□□ 0.98
CALD1-215ENST00000472096 LMO7Q8WWI1 1683 aa21.2■□□□□ 0.98
CALD1-215ENST00000472096 KTN1Q86UP2 1357 aaKnown RBP21.2■□□□□ 0.98
CALD1-215ENST00000472096 CACNB1Q02641 598 aaPredicted RBP21.19■□□□□ 0.98
CALD1-215ENST00000472096 ZNF692Q9BU19 519 aaPredicted RBP21.19■□□□□ 0.98
CALD1-215ENST00000472096 KIAA0232Q92628 1395 aa21.19■□□□□ 0.98
CALD1-215ENST00000472096 MYOM1P52179 1685 aa21.18■□□□□ 0.98
CALD1-215ENST00000472096 NINLQ9Y2I6 1382 aa21.18■□□□□ 0.98
CALD1-215ENST00000472096 SLC24A1O60721 1099 aa21.17■□□□□ 0.98
CALD1-215ENST00000472096 FKBP8Q14318 412 aa21.17■□□□□ 0.98
CALD1-215ENST00000472096 NLRP13Q86W25 1043 aa21.17■□□□□ 0.98
CALD1-215ENST00000472096 PRDM11Q9NQV5 511 aa21.17■□□□□ 0.98
CALD1-215ENST00000472096 TTC21BQ7Z4L5 1316 aa21.17■□□□□ 0.98
CALD1-215ENST00000472096 TTC21AQ8NDW8 1320 aa21.17■□□□□ 0.98
CALD1-215ENST00000472096 BRWD3Q6RI45 1802 aa21.17■□□□□ 0.98
CALD1-215ENST00000472096 A0A1W2PP64 1363 aa21.16■□□□□ 0.98
CALD1-215ENST00000472096 CPDO75976 1380 aa21.16■□□□□ 0.98
CALD1-215ENST00000472096 TMC1Q8TDI8 760 aa21.16■□□□□ 0.98
CALD1-215ENST00000472096 GJD4Q96KN9 370 aaPredicted RBP21.16■□□□□ 0.98
CALD1-215ENST00000472096 VPS72Q15906 364 aa21.15■□□□□ 0.98
CALD1-215ENST00000472096 BTG4Q9NY30 223 aa21.15■□□□□ 0.98
CALD1-215ENST00000472096 NLRP6P59044 892 aa21.14■□□□□ 0.97
CALD1-215ENST00000472096 TMF1P82094 1093 aa21.14■□□□□ 0.97
CALD1-215ENST00000472096 SLC12A5Q9H2X9 1139 aa21.14■□□□□ 0.97
CALD1-215ENST00000472096 EDC4Q6P2E9 1401 aaKnown RBP21.13■□□□□ 0.97
CALD1-215ENST00000472096 COL18A1P39060 1754 aa21.13■□□□□ 0.97
CALD1-215ENST00000472096 ZC3H6P61129 1189 aaKnown RBP21.13■□□□□ 0.97
CALD1-215ENST00000472096 CHRNA2Q15822 529 aa21.12■□□□□ 0.97
CALD1-215ENST00000472096 HDGFL2Q7Z4V5 671 aaPredicted RBP21.12■□□□□ 0.97
CALD1-215ENST00000472096 NFAT5O94916 1531 aa21.12■□□□□ 0.97
CALD1-215ENST00000472096 CAMTA1Q9Y6Y1 1673 aa21.12■□□□□ 0.97
CALD1-215ENST00000472096 RGPD5Q99666 1765 aa21.11■□□□□ 0.97
CALD1-215ENST00000472096 GCP02774 474 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms