RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 RGPD4Q7Z3J3 1758 aa9.38□□□□□ -0.91
VARS-222ENST00000470953 LMTK2Q8IWU2 1503 aa9.38□□□□□ -0.91
VARS-222ENST00000470953 NLGN2Q8NFZ4 835 aa9.38□□□□□ -0.91
VARS-222ENST00000470953 BTG4Q9NY30 223 aa9.38□□□□□ -0.91
VARS-222ENST00000470953 BCL11BQ9C0K0 894 aaPredicted RBP9.37□□□□□ -0.91
VARS-222ENST00000470953 ERBINQ96RT1 1412 aa9.37□□□□□ -0.91
VARS-222ENST00000470953 GRIN3BO60391 1043 aa9.36□□□□□ -0.91
VARS-222ENST00000470953 KANK1Q14678 1352 aa9.36□□□□□ -0.91
VARS-222ENST00000470953 MLLT1Q03111 559 aaPredicted RBP9.35□□□□□ -0.91
VARS-222ENST00000470953 TOMM70O94826 608 aa9.34□□□□□ -0.91
VARS-222ENST00000470953 PROM2Q8N271 834 aa9.33□□□□□ -0.92
VARS-222ENST00000470953 LRPPRCP42704 1394 aaKnown RBP9.33□□□□□ -0.92
VARS-222ENST00000470953 SLC15A2Q16348 729 aa9.32□□□□□ -0.92
VARS-222ENST00000470953 STK32BQ9NY57 414 aa9.32□□□□□ -0.92
VARS-222ENST00000470953 COL14A1Q05707 1796 aaKnown RBP9.32□□□□□ -0.92
VARS-222ENST00000470953 TNS3Q68CZ2 1445 aa9.31□□□□□ -0.92
VARS-222ENST00000470953 RRBP1Q9P2E9 1410 aaKnown RBP9.31□□□□□ -0.92
VARS-222ENST00000470953 PLSCR1O15162 318 aa9.31□□□□□ -0.92
VARS-222ENST00000470953 PDE3BQ13370 1112 aa9.31□□□□□ -0.92
VARS-222ENST00000470953 ROBO2Q9HCK4 1378 aa9.31□□□□□ -0.92
VARS-222ENST00000470953 SPATA31A1Q5TZJ5 1347 aa9.31□□□□□ -0.92
VARS-222ENST00000470953 PTF1AQ7RTS3 328 aa9.3□□□□□ -0.92
VARS-222ENST00000470953 USP19O94966 1318 aa9.3□□□□□ -0.92
VARS-222ENST00000470953 ARHGEF28Q8N1W1 1705 aaKnown RBP9.29□□□□□ -0.92
VARS-222ENST00000470953 NUTM2FA1L443 756 aa9.29□□□□□ -0.92
VARS-222ENST00000470953 KRT28Q7Z3Y7 464 aa9.29□□□□□ -0.92
VARS-222ENST00000470953 CHIC2Q9UKJ5 165 aa9.29□□□□□ -0.92
VARS-222ENST00000470953 CCDC144AA2RUR9 1427 aa9.29□□□□□ -0.92
VARS-222ENST00000470953 TECPR2O15040 1411 aa9.29□□□□□ -0.92
VARS-222ENST00000470953 MYOM3Q5VTT5 1437 aa9.29□□□□□ -0.92
VARS-222ENST00000470953 CDC42BPGQ6DT37 1551 aa9.29□□□□□ -0.92
VARS-222ENST00000470953 SBF2Q86WG5 1849 aa9.27□□□□□ -0.93
VARS-222ENST00000470953 TNRC18O15417 2968 aaPredicted RBP9.26□□□□□ -0.93
VARS-222ENST00000470953 PEAK1Q9H792 1746 aa9.26□□□□□ -0.93
VARS-222ENST00000470953 RGS19P49795 217 aa9.26□□□□□ -0.93
VARS-222ENST00000470953 KANK4Q5T7N3 995 aaPredicted RBP9.26□□□□□ -0.93
VARS-222ENST00000470953 LMOD2Q6P5Q4 547 aa9.26□□□□□ -0.93
VARS-222ENST00000470953 ABHD8Q96I13 439 aa9.26□□□□□ -0.93
VARS-222ENST00000470953 USP35Q9P2H5 1018 aa9.25□□□□□ -0.93
VARS-222ENST00000470953 KIF1AQ12756 1690 aa9.25□□□□□ -0.93
VARS-222ENST00000470953 TOPAZ1Q8N9V7 1692 aa9.25□□□□□ -0.93
VARS-222ENST00000470953 TULP4Q9NRJ4 1543 aa9.25□□□□□ -0.93
VARS-222ENST00000470953 COL24A1Q17RW2 1714 aa9.25□□□□□ -0.93
VARS-222ENST00000470953 TXNRD1Q16881 649 aa9.24□□□□□ -0.93
VARS-222ENST00000470953 RBM46Q8TBY0 533 aaKnown RBP9.24□□□□□ -0.93
VARS-222ENST00000470953 NMRK2Q9NPI5 230 aa9.24□□□□□ -0.93
VARS-222ENST00000470953 DHX57Q6P158 1386 aaKnown RBP9.24□□□□□ -0.93
VARS-222ENST00000470953 DAPK1P53355 1430 aa9.23□□□□□ -0.93
VARS-222ENST00000470953 IQGAP3Q86VI3 1631 aa9.23□□□□□ -0.93
VARS-222ENST00000470953 POLD1P28340 1107 aa9.22□□□□□ -0.93
VARS-222ENST00000470953 STRN4Q9NRL3 753 aa9.22□□□□□ -0.93
VARS-222ENST00000470953 ARHGEF10O15013 1369 aa9.22□□□□□ -0.93
VARS-222ENST00000470953 PRAG1Q86YV5 1406 aa9.22□□□□□ -0.93
VARS-222ENST00000470953 PAPPAQ13219 1627 aa9.21□□□□□ -0.93
VARS-222ENST00000470953 FOXN1O15353 648 aa9.21□□□□□ -0.94
VARS-222ENST00000470953 BARGINQ6ZT62 677 aa9.21□□□□□ -0.94
VARS-222ENST00000470953 PRDM10Q9NQV6 1147 aa9.21□□□□□ -0.94
VARS-222ENST00000470953 ANKRD30AQ9BXX3 1397 aa9.21□□□□□ -0.94
VARS-222ENST00000470953 OVOS2A0A0G2JMS6 1433 aa9.21□□□□□ -0.94
VARS-222ENST00000470953 OVOS2A0A0J9YW53 1432 aa9.21□□□□□ -0.94
VARS-222ENST00000470953 HFM1A2PYH4 1435 aa9.21□□□□□ -0.94
VARS-222ENST00000470953 OVOS2Q6IE36 1432 aa9.21□□□□□ -0.94
VARS-222ENST00000470953 PDE4DIPQ5VU43 2346 aa9.2□□□□□ -0.94
VARS-222ENST00000470953 CCDC85CA6NKD9 419 aa9.2□□□□□ -0.94
VARS-222ENST00000470953 FSTL1Q12841 308 aa9.2□□□□□ -0.94
VARS-222ENST00000470953 SBNO1A3KN83 1393 aa9.2□□□□□ -0.94
VARS-222ENST00000470953 NAIPQ13075 1403 aa9.2□□□□□ -0.94
VARS-222ENST00000470953 E9PCH4 1651 aa9.2□□□□□ -0.94
VARS-222ENST00000470953 PARP4Q9UKK3 1724 aaKnown RBP9.19□□□□□ -0.94
VARS-222ENST00000470953 PSME1Q06323 249 aa9.19□□□□□ -0.94
VARS-222ENST00000470953 ZNF827Q17R98 1081 aa9.18□□□□□ -0.94
VARS-222ENST00000470953 PMFBP1Q8TBY8 1022 aa9.18□□□□□ -0.94
VARS-222ENST00000470953 FMN2Q9NZ56 1722 aa9.18□□□□□ -0.94
VARS-222ENST00000470953 PHRF1Q9P1Y6 1649 aaKnown RBP9.18□□□□□ -0.94
VARS-222ENST00000470953 CRYBG1Q9Y4K1 1723 aa9.18□□□□□ -0.94
VARS-222ENST00000470953 ATP7BP35670 1465 aa9.17□□□□□ -0.94
VARS-222ENST00000470953 ZNF326Q5BKZ1 582 aaKnown RBP9.17□□□□□ -0.94
VARS-222ENST00000470953 PRDM11Q9NQV5 511 aa9.17□□□□□ -0.94
VARS-222ENST00000470953 C11orf95C9JLR9 678 aaPredicted RBP9.16□□□□□ -0.94
VARS-222ENST00000470953 CHRNA2Q15822 529 aa9.16□□□□□ -0.94
VARS-222ENST00000470953 C16orf71Q8IYS4 520 aaPredicted RBP9.16□□□□□ -0.94
VARS-222ENST00000470953 RGPD8O14715 1765 aaPredicted RBP9.16□□□□□ -0.94
VARS-222ENST00000470953 SSH2Q76I76 1423 aa9.15□□□□□ -0.94
VARS-222ENST00000470953 ANKRD50Q9ULJ7 1429 aa9.15□□□□□ -0.94
VARS-222ENST00000470953 LRRC37A3O60309 1634 aa9.14□□□□□ -0.95
VARS-222ENST00000470953 TCP11L2Q8N4U5 519 aa9.14□□□□□ -0.95
VARS-222ENST00000470953 SLC16A10Q8TF71 515 aa9.14□□□□□ -0.95
VARS-222ENST00000470953 PHF8Q9UPP1 1060 aa9.14□□□□□ -0.95
VARS-222ENST00000470953 NRXN1Q9ULB1 1477 aa9.14□□□□□ -0.95
VARS-222ENST00000470953 TRPM3Q9HCF6 1732 aaPredicted RBP9.14□□□□□ -0.95
VARS-222ENST00000470953 ALS2Q96Q42 1657 aa9.13□□□□□ -0.95
VARS-222ENST00000470953 KIAA0232Q92628 1395 aa9.13□□□□□ -0.95
VARS-222ENST00000470953 LARP1Q6PKG0 1096 aaKnown RBP9.13□□□□□ -0.95
VARS-222ENST00000470953 QSER1Q2KHR3 1735 aa9.12□□□□□ -0.95
VARS-222ENST00000470953 CTCFP49711 727 aaPredicted RBP9.12□□□□□ -0.95
VARS-222ENST00000470953 LBX1P52954 281 aa9.12□□□□□ -0.95
VARS-222ENST00000470953 TUBGCP6Q96RT7 1819 aa9.12□□□□□ -0.95
VARS-222ENST00000470953 PNPLA7Q6ZV29 1317 aa9.11□□□□□ -0.95
VARS-222ENST00000470953 WAPLQ7Z5K2 1190 aa9.11□□□□□ -0.95
VARS-222ENST00000470953 CICQ96RK0 1608 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms