RNA–Protein interactions for RNA: ENST00000470180.2

C1orf43-207, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 5

Gene C1orf43, Length 1,861 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-207ENST00000470180 COL3A1P02461 1466 aaPredicted RBP22.51■■□□□ 1.19
C1orf43-207ENST00000470180 FBLN1P23142 703 aa22.5■■□□□ 1.19
C1orf43-207ENST00000470180 RNF123Q5XPI4 1314 aa22.49■■□□□ 1.19
C1orf43-207ENST00000470180 IRX6P78412 446 aaPredicted RBP22.49■■□□□ 1.19
C1orf43-207ENST00000470180 PNPLA6Q8IY17 1366 aa22.49■■□□□ 1.19
C1orf43-207ENST00000470180 MAP2P11137 1827 aaKnown RBP22.49■■□□□ 1.19
C1orf43-207ENST00000470180 NRKQ7Z2Y5 1582 aa22.48■■□□□ 1.19
C1orf43-207ENST00000470180 POLKQ9UBT6 870 aa22.48■■□□□ 1.19
C1orf43-207ENST00000470180 TTC21BQ7Z4L5 1316 aa22.48■■□□□ 1.19
C1orf43-207ENST00000470180 FMN2Q9NZ56 1722 aa22.47■■□□□ 1.19
C1orf43-207ENST00000470180 USP6P35125 1406 aa22.47■■□□□ 1.19
C1orf43-207ENST00000470180 PMFBP1Q8TBY8 1022 aa22.46■■□□□ 1.19
C1orf43-207ENST00000470180 SSH2Q76I76 1423 aa22.46■■□□□ 1.19
C1orf43-207ENST00000470180 NALCNQ8IZF0 1738 aa22.46■■□□□ 1.19
C1orf43-207ENST00000470180 RUNDC1Q96C34 613 aa22.45■■□□□ 1.19
C1orf43-207ENST00000470180 ANKARQ7Z5J8 1434 aa22.45■■□□□ 1.18
C1orf43-207ENST00000470180 RBM33Q96EV2 1170 aaKnown RBP22.45■■□□□ 1.18
C1orf43-207ENST00000470180 COG3Q96JB2 828 aa22.45■■□□□ 1.18
C1orf43-207ENST00000470180 U2AF1L5P0DN76 240 aaPredicted RBP22.43■■□□□ 1.18
C1orf43-207ENST00000470180 U2AF1Q01081 240 aaKnown RBP eCLIP22.43■■□□□ 1.18
C1orf43-207ENST00000470180 AATKQ6ZMQ8 1374 aa22.43■■□□□ 1.18
C1orf43-207ENST00000470180 NGEFQ8N5V2 710 aa22.43■■□□□ 1.18
C1orf43-207ENST00000470180 GOLGA2Q08379 1002 aa22.41■■□□□ 1.18
C1orf43-207ENST00000470180 IQSEC2Q5JU85 1478 aa22.41■■□□□ 1.18
C1orf43-207ENST00000470180 DIAPH1O60610 1272 aaKnown RBP22.41■■□□□ 1.18
C1orf43-207ENST00000470180 KDM4FA0A1W2PPD8 638 aa22.4■■□□□ 1.18
C1orf43-207ENST00000470180 TCP11L2Q8N4U5 519 aa22.4■■□□□ 1.18
C1orf43-207ENST00000470180 EMILIN1Q9Y6C2 1016 aa22.4■■□□□ 1.18
C1orf43-207ENST00000470180 NWD1Q149M9 1564 aa22.39■■□□□ 1.18
C1orf43-207ENST00000470180 SLFN5Q08AF3 891 aa22.39■■□□□ 1.18
C1orf43-207ENST00000470180 DUSP27Q5VZP5 1158 aa22.39■■□□□ 1.18
C1orf43-207ENST00000470180 NGDNQ8NEJ9 315 aaKnown RBP22.39■■□□□ 1.18
C1orf43-207ENST00000470180 RCAN3Q9UKA8 241 aa22.39■■□□□ 1.18
C1orf43-207ENST00000470180 U2SURPO15042 1029 aaKnown RBP22.39■■□□□ 1.17
C1orf43-207ENST00000470180 ERICH6BQ5W0A0 696 aa22.39■■□□□ 1.17
C1orf43-207ENST00000470180 TRMT2AQ8IZ69 625 aaKnown RBP22.39■■□□□ 1.17
C1orf43-207ENST00000470180 ADGRL3Q9HAR2 1447 aa22.38■■□□□ 1.17
C1orf43-207ENST00000470180 PPM1GO15355 546 aaPredicted RBP22.38■■□□□ 1.17
C1orf43-207ENST00000470180 OVOS2A0A0J9YW53 1432 aa22.38■■□□□ 1.17
C1orf43-207ENST00000470180 OVOS2Q6IE36 1432 aa22.38■■□□□ 1.17
C1orf43-207ENST00000470180 PLEKHF1Q96S99 279 aa22.37■■□□□ 1.17
C1orf43-207ENST00000470180 SPINK5Q9NQ38 1064 aaPredicted RBP22.37■■□□□ 1.17
C1orf43-207ENST00000470180 TTC21AQ8NDW8 1320 aa22.37■■□□□ 1.17
C1orf43-207ENST00000470180 WWC1Q8IX03 1113 aa22.37■■□□□ 1.17
C1orf43-207ENST00000470180 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
C1orf43-207ENST00000470180 DMRT2Q9Y5R5 561 aa22.37■■□□□ 1.17
C1orf43-207ENST00000470180 RRS1Q15050 365 aaKnown RBP22.35■■□□□ 1.17
C1orf43-207ENST00000470180 RRP7AQ9Y3A4 280 aaKnown RBP22.35■■□□□ 1.17
C1orf43-207ENST00000470180 CDK12Q9NYV4 1490 aaPredicted RBP22.34■■□□□ 1.17
C1orf43-207ENST00000470180 NEUROD2Q15784 382 aa22.34■■□□□ 1.17
C1orf43-207ENST00000470180 USP31Q70CQ4 1352 aa22.33■■□□□ 1.17
C1orf43-207ENST00000470180 HSPA2P54652 639 aa22.33■■□□□ 1.17
C1orf43-207ENST00000470180 NCBP3Q53F19 620 aaKnown RBP22.33■■□□□ 1.17
C1orf43-207ENST00000470180 IL13P35225 146 aa22.32■■□□□ 1.16
C1orf43-207ENST00000470180 CCDC27Q2M243 656 aa22.31■■□□□ 1.16
C1orf43-207ENST00000470180 PROSER2Q86WR7 435 aaPredicted RBP22.31■■□□□ 1.16
C1orf43-207ENST00000470180 PHF8Q9UPP1 1060 aa22.31■■□□□ 1.16
C1orf43-207ENST00000470180 PIK3C2AO00443 1686 aa22.3■■□□□ 1.16
C1orf43-207ENST00000470180 E9PSI1 815 aa22.3■■□□□ 1.16
C1orf43-207ENST00000470180 RRP1P56182 461 aaKnown RBP22.3■■□□□ 1.16
C1orf43-207ENST00000470180 FCHSD2O94868 740 aa22.29■■□□□ 1.16
C1orf43-207ENST00000470180 STRCP1A6NGW2 1772 aa22.28■■□□□ 1.16
C1orf43-207ENST00000470180 C14orf37Q86TY3 774 aa22.28■■□□□ 1.16
C1orf43-207ENST00000470180 RSPH6AQ9H0K4 717 aa22.28■■□□□ 1.16
C1orf43-207ENST00000470180 PPP4R2Q9NY27 417 aa22.28■■□□□ 1.16
C1orf43-207ENST00000470180 TMPOP42166 694 aaKnown RBP22.27■■□□□ 1.16
C1orf43-207ENST00000470180 WDR63Q8IWG1 891 aa22.27■■□□□ 1.16
C1orf43-207ENST00000470180 PNNQ9H307 717 aaKnown RBP22.26■■□□□ 1.15
C1orf43-207ENST00000470180 PEAK1Q9H792 1746 aa22.26■■□□□ 1.15
C1orf43-207ENST00000470180 MARF1Q9Y4F3 1742 aaKnown RBP22.25■■□□□ 1.15
C1orf43-207ENST00000470180 ESCO1Q5FWF5 840 aa22.25■■□□□ 1.15
C1orf43-207ENST00000470180 LRRC7Q96NW7 1537 aa22.25■■□□□ 1.15
C1orf43-207ENST00000470180 LMTK3Q96Q04 1460 aa22.24■■□□□ 1.15
C1orf43-207ENST00000470180 TRIM35Q9UPQ4 493 aa22.24■■□□□ 1.15
C1orf43-207ENST00000470180 MAPK8IP3Q9UPT6 1336 aa22.23■■□□□ 1.15
C1orf43-207ENST00000470180 HMOX1P09601 288 aa22.23■■□□□ 1.15
C1orf43-207ENST00000470180 PRKAR2BP31323 418 aa22.23■■□□□ 1.15
C1orf43-207ENST00000470180 NLRP6P59044 892 aa22.23■■□□□ 1.15
C1orf43-207ENST00000470180 USP54Q70EL1 1684 aa22.23■■□□□ 1.15
C1orf43-207ENST00000470180 ORAI2Q96SN7 254 aa22.22■■□□□ 1.15
C1orf43-207ENST00000470180 C19orf44Q9H6X5 657 aa22.22■■□□□ 1.15
C1orf43-207ENST00000470180 SOX12O15370 315 aa22.22■■□□□ 1.15
C1orf43-207ENST00000470180 MAP3K19Q56UN5 1328 aa22.21■■□□□ 1.15
C1orf43-207ENST00000470180 STRCQ7RTU9 1775 aa22.21■■□□□ 1.15
C1orf43-207ENST00000470180 EIF4A2Q14240 407 aaKnown RBP22.21■■□□□ 1.15
C1orf43-207ENST00000470180 NUTM2GQ5VZR2 741 aa22.21■■□□□ 1.15
C1orf43-207ENST00000470180 PAK3O75914 559 aaPredicted RBP22.2■■□□□ 1.14
C1orf43-207ENST00000470180 HSP90AB2PQ58FF8 381 aa22.2■■□□□ 1.14
C1orf43-207ENST00000470180 ABTB2Q8N961 1025 aa22.2■■□□□ 1.14
C1orf43-207ENST00000470180 PLIN1O60240 522 aa22.2■■□□□ 1.14
C1orf43-207ENST00000470180 PHACTR3Q96KR7 559 aa22.2■■□□□ 1.14
C1orf43-207ENST00000470180 RIPK4P57078 832 aa22.19■■□□□ 1.14
C1orf43-207ENST00000470180 TMEM94Q12767 1356 aa22.18■■□□□ 1.14
C1orf43-207ENST00000470180 PSME1Q06323 249 aa22.18■■□□□ 1.14
C1orf43-207ENST00000470180 C1orf167Q5SNV9 1468 aa22.16■■□□□ 1.14
C1orf43-207ENST00000470180 NCOA3Q9Y6Q9 1424 aa22.16■■□□□ 1.14
C1orf43-207ENST00000470180 SBNO1A3KN83 1393 aa22.16■■□□□ 1.14
C1orf43-207ENST00000470180 FOXO3O43524 673 aa22.15■■□□□ 1.14
C1orf43-207ENST00000470180 B4GALNT3Q6L9W6 998 aa22.15■■□□□ 1.14
C1orf43-207ENST00000470180 RGPD1P0DJD0 1748 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms