RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 SLC4A3P48751 1232 aa12.21□□□□□ -0.45
TOP3A-203ENST00000469739 TULP4Q9NRJ4 1543 aa12.21□□□□□ -0.45
TOP3A-203ENST00000469739 DHX37Q8IY37 1157 aaKnown RBP12.2□□□□□ -0.46
TOP3A-203ENST00000469739 TCERG1O14776 1098 aaKnown RBP12.2□□□□□ -0.46
TOP3A-203ENST00000469739 INSRP06213 1382 aa12.2□□□□□ -0.46
TOP3A-203ENST00000469739 TERF2IPQ9NYB0 399 aa12.2□□□□□ -0.46
TOP3A-203ENST00000469739 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-203ENST00000469739 SLC26A8Q96RN1 970 aa12.19□□□□□ -0.46
TOP3A-203ENST00000469739 THUMPD2Q9BTF0 503 aaKnown RBP12.19□□□□□ -0.46
TOP3A-203ENST00000469739 ELL2O00472 640 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-203ENST00000469739 HDGFL2Q7Z4V5 671 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-203ENST00000469739 USP32Q8NFA0 1604 aa12.18□□□□□ -0.46
TOP3A-203ENST00000469739 IGHDP01880 384 aa12.18□□□□□ -0.46
TOP3A-203ENST00000469739 YTHDC2Q9H6S0 1430 aaKnown RBP12.18□□□□□ -0.46
TOP3A-203ENST00000469739 RLBP1P12271 317 aa12.18□□□□□ -0.46
TOP3A-203ENST00000469739 ALKQ9UM73 1620 aa12.17□□□□□ -0.46
TOP3A-203ENST00000469739 POLR3AO14802 1390 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-203ENST00000469739 ANKRD36BQ8N2N9 1353 aa12.17□□□□□ -0.46
TOP3A-203ENST00000469739 MAPK8IP3Q9UPT6 1336 aa12.17□□□□□ -0.46
TOP3A-203ENST00000469739 NME9Q86XW9 330 aa12.17□□□□□ -0.46
TOP3A-203ENST00000469739 SETD1AO15047 1707 aaKnown RBP12.17□□□□□ -0.46
TOP3A-203ENST00000469739 RRS1Q15050 365 aaKnown RBP12.17□□□□□ -0.46
TOP3A-203ENST00000469739 A2ML1A8K2U0 1454 aa12.17□□□□□ -0.46
TOP3A-203ENST00000469739 PTPRMP28827 1452 aa12.17□□□□□ -0.46
TOP3A-203ENST00000469739 EMILIN1Q9Y6C2 1016 aa12.16□□□□□ -0.46
TOP3A-203ENST00000469739 NKTRP30414 1462 aaKnown RBP12.16□□□□□ -0.46
TOP3A-203ENST00000469739 TRMT2AQ8IZ69 625 aaKnown RBP12.16□□□□□ -0.46
TOP3A-203ENST00000469739 IPO9Q96P70 1041 aaKnown RBP12.16□□□□□ -0.46
TOP3A-203ENST00000469739 BACH2Q9BYV9 841 aa12.16□□□□□ -0.46
TOP3A-203ENST00000469739 RIPK4P57078 832 aa12.16□□□□□ -0.46
TOP3A-203ENST00000469739 EXOSC9Q06265 439 aaKnown RBP12.15□□□□□ -0.46
TOP3A-203ENST00000469739 RARSP54136 660 aaKnown RBP12.14□□□□□ -0.47
TOP3A-203ENST00000469739 DIAPH1O60610 1272 aaKnown RBP12.14□□□□□ -0.47
TOP3A-203ENST00000469739 TRHP20396 242 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-203ENST00000469739 RBM33Q96EV2 1170 aaKnown RBP12.14□□□□□ -0.47
TOP3A-203ENST00000469739 METP08581 1390 aa12.13□□□□□ -0.47
TOP3A-203ENST00000469739 PRKAR2BP31323 418 aa12.13□□□□□ -0.47
TOP3A-203ENST00000469739 TMPOP42166 694 aaKnown RBP12.13□□□□□ -0.47
TOP3A-203ENST00000469739 NRXN3Q9Y4C0 1643 aa12.13□□□□□ -0.47
TOP3A-203ENST00000469739 CENPQQ7L2Z9 268 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-203ENST00000469739 SMC4Q9NTJ3 1288 aa12.12□□□□□ -0.47
TOP3A-203ENST00000469739 RIMS2Q9UQ26 1411 aa12.12□□□□□ -0.47
TOP3A-203ENST00000469739 ZMYM3Q14202 1370 aa12.12□□□□□ -0.47
TOP3A-203ENST00000469739 FTSJ3Q8IY81 847 aaKnown RBP12.12□□□□□ -0.47
TOP3A-203ENST00000469739 PHACTR3Q96KR7 559 aa12.12□□□□□ -0.47
TOP3A-203ENST00000469739 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
TOP3A-203ENST00000469739 PMFBP1Q8TBY8 1022 aa12.11□□□□□ -0.47
TOP3A-203ENST00000469739 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
TOP3A-203ENST00000469739 NUDT16Q96DE0 195 aaKnown RBP12.11□□□□□ -0.47
TOP3A-203ENST00000469739 DCTN1Q14203 1278 aa12.1□□□□□ -0.47
TOP3A-203ENST00000469739 PUS7Q96PZ0 661 aaKnown RBP12.1□□□□□ -0.47
TOP3A-203ENST00000469739 POLKQ9UBT6 870 aa12.1□□□□□ -0.47
TOP3A-203ENST00000469739 PCDHB15Q9Y5E8 787 aa12.1□□□□□ -0.47
TOP3A-203ENST00000469739 TRIM35Q9UPQ4 493 aa12.1□□□□□ -0.47
TOP3A-203ENST00000469739 UBR1Q8IWV7 1749 aa12.1□□□□□ -0.47
TOP3A-203ENST00000469739 ATAD2Q6PL18 1390 aa12.09□□□□□ -0.47
TOP3A-203ENST00000469739 WASLO00401 505 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-203ENST00000469739 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
TOP3A-203ENST00000469739 NUTM2GQ5VZR2 741 aa12.09□□□□□ -0.47
TOP3A-203ENST00000469739 MYH16Q9H6N6 1097 aa12.09□□□□□ -0.47
TOP3A-203ENST00000469739 ABCC11Q96J66 1382 aa12.09□□□□□ -0.47
TOP3A-203ENST00000469739 DLC1Q96QB1 1528 aa12.09□□□□□ -0.47
TOP3A-203ENST00000469739 FAM83GA6ND36 823 aa12.09□□□□□ -0.47
TOP3A-203ENST00000469739 LTKP29376 864 aa12.09□□□□□ -0.47
TOP3A-203ENST00000469739 ITPRIPQ8IWB1 547 aa12.09□□□□□ -0.47
TOP3A-203ENST00000469739 ARID3AQ99856 593 aa12.09□□□□□ -0.47
TOP3A-203ENST00000469739 CHMP4AQ9BY43 222 aa12.09□□□□□ -0.47
TOP3A-203ENST00000469739 SSH1Q8WYL5 1049 aa12.08□□□□□ -0.48
TOP3A-203ENST00000469739 ANKRD26Q9UPS8 1709 aa12.08□□□□□ -0.48
TOP3A-203ENST00000469739 NEFMP07197 916 aa12.08□□□□□ -0.48
TOP3A-203ENST00000469739 WDR63Q8IWG1 891 aa12.07□□□□□ -0.48
TOP3A-203ENST00000469739 PLEKHF1Q96S99 279 aa12.07□□□□□ -0.48
TOP3A-203ENST00000469739 KNDC1Q76NI1 1749 aa12.07□□□□□ -0.48
TOP3A-203ENST00000469739 TNRQ92752 1358 aa12.06□□□□□ -0.48
TOP3A-203ENST00000469739 NINLQ9Y2I6 1382 aa12.06□□□□□ -0.48
TOP3A-203ENST00000469739 MS4A1P11836 297 aa12.06□□□□□ -0.48
TOP3A-203ENST00000469739 NOB1Q9ULX3 412 aaKnown RBP12.06□□□□□ -0.48
TOP3A-203ENST00000469739 COG3Q96JB2 828 aa12.06□□□□□ -0.48
TOP3A-203ENST00000469739 CD163L1Q9NR16 1453 aa12.05□□□□□ -0.48
TOP3A-203ENST00000469739 SEC24BO95487 1268 aa12.05□□□□□ -0.48
TOP3A-203ENST00000469739 AEBP1Q8IUX7 1158 aa12.05□□□□□ -0.48
TOP3A-203ENST00000469739 PPIP5K1Q6PFW1 1433 aa12.05□□□□□ -0.48
TOP3A-203ENST00000469739 PDE3AQ14432 1141 aa12.05□□□□□ -0.48
TOP3A-203ENST00000469739 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
TOP3A-203ENST00000469739 KIF20BQ96Q89 1820 aa12.05□□□□□ -0.48
TOP3A-203ENST00000469739 NSD2O96028 1365 aa12.05□□□□□ -0.48
TOP3A-203ENST00000469739 C8orf34Q49A92 452 aa12.04□□□□□ -0.48
TOP3A-203ENST00000469739 C1orf115Q9H7X2 142 aa12.04□□□□□ -0.48
TOP3A-203ENST00000469739 PRR36Q9H6K5 1346 aa12.04□□□□□ -0.48
TOP3A-203ENST00000469739 ZBTB7CA1YPR0 619 aa12.04□□□□□ -0.48
TOP3A-203ENST00000469739 FAM161AQ3B820 660 aa12.04□□□□□ -0.48
TOP3A-203ENST00000469739 ZKSCAN2Q63HK3 967 aa12.04□□□□□ -0.48
TOP3A-203ENST00000469739 TSPYL6Q8N831 410 aa12.04□□□□□ -0.48
TOP3A-203ENST00000469739 C3P01024 1663 aa12.04□□□□□ -0.48
TOP3A-203ENST00000469739 TRIM27P14373 513 aa12.04□□□□□ -0.48
TOP3A-203ENST00000469739 DZIP1LQ8IYY4 767 aaKnown RBP12.04□□□□□ -0.48
TOP3A-203ENST00000469739 FER1L4A9Z1Z3 1794 aa12.03□□□□□ -0.48
TOP3A-203ENST00000469739 KRT24Q2M2I5 525 aa12.03□□□□□ -0.48
TOP3A-203ENST00000469739 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.02□□□□□ -0.49
TOP3A-203ENST00000469739 PDZRN3Q9UPQ7 1066 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms