RNA–Protein interactions for RNA: ENST00000469541.5

ITM2A-205, Transcript of integral membrane protein 2A, humanhuman

TSL 2

Gene ITM2A, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-205ENST00000469541 XRN1Q8IZH2 1706 aaKnown RBP11.72□□□□□ -0.53
ITM2A-205ENST00000469541 NSD3Q9BZ95 1437 aa11.72□□□□□ -0.53
ITM2A-205ENST00000469541 PAK3O75914 559 aaPredicted RBP11.72□□□□□ -0.53
ITM2A-205ENST00000469541 SAFB2Q14151 953 aaKnown RBP eCLIP11.72□□□□□ -0.53
ITM2A-205ENST00000469541 CDK19Q9BWU1 502 aa11.72□□□□□ -0.53
ITM2A-205ENST00000469541 EID1Q9Y6B2 187 aa11.72□□□□□ -0.53
ITM2A-205ENST00000469541 FAM9BQ8IZU0 186 aa11.71□□□□□ -0.53
ITM2A-205ENST00000469541 TMC1Q8TDI8 760 aa11.71□□□□□ -0.53
ITM2A-205ENST00000469541 PIK3R4Q99570 1358 aa11.7□□□□□ -0.54
ITM2A-205ENST00000469541 HNRNPUQ00839 825 aaKnown RBP eCLIP11.7□□□□□ -0.54
ITM2A-205ENST00000469541 CNGB1Q14028 1251 aaPredicted RBP11.7□□□□□ -0.54
ITM2A-205ENST00000469541 PTCH1Q13635 1447 aa11.69□□□□□ -0.54
ITM2A-205ENST00000469541 A0A1W2PP64 1363 aa11.69□□□□□ -0.54
ITM2A-205ENST00000469541 ZBED9Q6R2W3 1325 aa11.69□□□□□ -0.54
ITM2A-205ENST00000469541 WASLO00401 505 aaPredicted RBP11.69□□□□□ -0.54
ITM2A-205ENST00000469541 ATP7BP35670 1465 aa11.69□□□□□ -0.54
ITM2A-205ENST00000469541 NSD2O96028 1365 aa11.68□□□□□ -0.54
ITM2A-205ENST00000469541 SRPK2P78362 688 aaKnown RBP11.68□□□□□ -0.54
ITM2A-205ENST00000469541 SLC26A8Q96RN1 970 aa11.68□□□□□ -0.54
ITM2A-205ENST00000469541 GTF3C3Q9Y5Q9 886 aa11.68□□□□□ -0.54
ITM2A-205ENST00000469541 ANKRD26Q9UPS8 1709 aa11.68□□□□□ -0.54
ITM2A-205ENST00000469541 CPSF1Q10570 1443 aaKnown RBP11.68□□□□□ -0.54
ITM2A-205ENST00000469541 BLMP54132 1417 aaPredicted RBP11.67□□□□□ -0.54
ITM2A-205ENST00000469541 CHD2O14647 1828 aaKnown RBP11.67□□□□□ -0.54
ITM2A-205ENST00000469541 TOPAZ1Q8N9V7 1692 aa11.66□□□□□ -0.54
ITM2A-205ENST00000469541 AMOTL2Q9Y2J4 779 aa11.66□□□□□ -0.54
ITM2A-205ENST00000469541 CGNL1Q0VF96 1302 aa11.65□□□□□ -0.54
ITM2A-205ENST00000469541 PRR36Q9H6K5 1346 aa11.65□□□□□ -0.54
ITM2A-205ENST00000469541 AKAP12Q02952 1782 aa11.65□□□□□ -0.54
ITM2A-205ENST00000469541 CDC42BPGQ6DT37 1551 aa11.65□□□□□ -0.54
ITM2A-205ENST00000469541 POLR3AO14802 1390 aaPredicted RBP11.65□□□□□ -0.55
ITM2A-205ENST00000469541 MON2Q7Z3U7 1717 aa11.64□□□□□ -0.55
ITM2A-205ENST00000469541 ANKLE2Q86XL3 938 aa11.64□□□□□ -0.55
ITM2A-205ENST00000469541 BCANQ96GW7 911 aa11.64□□□□□ -0.55
ITM2A-205ENST00000469541 TERF2IPQ9NYB0 399 aa11.64□□□□□ -0.55
ITM2A-205ENST00000469541 CABP1Q9NZU7 370 aa11.64□□□□□ -0.55
ITM2A-205ENST00000469541 FYB1O15117 783 aa11.63□□□□□ -0.55
ITM2A-205ENST00000469541 NUDT16Q96DE0 195 aaKnown RBP11.63□□□□□ -0.55
ITM2A-205ENST00000469541 KIF20BQ96Q89 1820 aa11.63□□□□□ -0.55
ITM2A-205ENST00000469541 SHPRHQ149N8 1683 aa11.62□□□□□ -0.55
ITM2A-205ENST00000469541 PLEKHG3A1L390 1219 aa11.62□□□□□ -0.55
ITM2A-205ENST00000469541 CCDC61Q9Y6R9 512 aa11.62□□□□□ -0.55
ITM2A-205ENST00000469541 NPHP4O75161 1426 aaPredicted RBP11.61□□□□□ -0.55
ITM2A-205ENST00000469541 PPIP5K1Q6PFW1 1433 aa11.61□□□□□ -0.55
ITM2A-205ENST00000469541 ASTLQ6HA08 431 aaPredicted RBP11.61□□□□□ -0.55
ITM2A-205ENST00000469541 NWD1Q149M9 1564 aa11.6□□□□□ -0.55
ITM2A-205ENST00000469541 NRKQ7Z2Y5 1582 aa11.6□□□□□ -0.55
ITM2A-205ENST00000469541 POTEJP0CG39 1038 aa11.6□□□□□ -0.55
ITM2A-205ENST00000469541 KCNA6P17658 529 aa11.6□□□□□ -0.55
ITM2A-205ENST00000469541 HDGFL2Q7Z4V5 671 aaPredicted RBP11.6□□□□□ -0.55
ITM2A-205ENST00000469541 MORC1Q86VD1 984 aa11.6□□□□□ -0.55
ITM2A-205ENST00000469541 MS4A3Q96HJ5 214 aa11.6□□□□□ -0.55
ITM2A-205ENST00000469541 ADAMTS8Q9UP79 889 aa11.6□□□□□ -0.55
ITM2A-205ENST00000469541 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
ITM2A-205ENST00000469541 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
ITM2A-205ENST00000469541 SMG6Q86US8 1419 aaKnown RBP11.6□□□□□ -0.55
ITM2A-205ENST00000469541 NCKAP5LQ9HCH0 1330 aa11.6□□□□□ -0.55
ITM2A-205ENST00000469541 COL3A1P02461 1466 aaPredicted RBP11.59□□□□□ -0.55
ITM2A-205ENST00000469541 NKTRP30414 1462 aaKnown RBP11.59□□□□□ -0.55
ITM2A-205ENST00000469541 ATMINO43313 823 aaPredicted RBP11.59□□□□□ -0.55
ITM2A-205ENST00000469541 ITSN1Q15811 1721 aa11.59□□□□□ -0.55
ITM2A-205ENST00000469541 FMN2Q9NZ56 1722 aa11.59□□□□□ -0.55
ITM2A-205ENST00000469541 PNPLA6Q8IY17 1366 aa11.57□□□□□ -0.56
ITM2A-205ENST00000469541 KDM4FA0A1W2PPD8 638 aa11.57□□□□□ -0.56
ITM2A-205ENST00000469541 POTEMA6NI47 508 aa11.57□□□□□ -0.56
ITM2A-205ENST00000469541 GGNBP2Q9H3C7 697 aa11.57□□□□□ -0.56
ITM2A-205ENST00000469541 ANKARQ7Z5J8 1434 aa11.57□□□□□ -0.56
ITM2A-205ENST00000469541 NALCNQ8IZF0 1738 aa11.57□□□□□ -0.56
ITM2A-205ENST00000469541 RGPD8O14715 1765 aaPredicted RBP11.56□□□□□ -0.56
ITM2A-205ENST00000469541 MTHFSP49914 203 aa11.56□□□□□ -0.56
ITM2A-205ENST00000469541 ZNF521Q96K83 1311 aa11.56□□□□□ -0.56
ITM2A-205ENST00000469541 C7P10643 843 aa11.55□□□□□ -0.56
ITM2A-205ENST00000469541 METRNQ9UJH8 293 aa11.55□□□□□ -0.56
ITM2A-205ENST00000469541 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
ITM2A-205ENST00000469541 USP6P35125 1406 aa11.54□□□□□ -0.56
ITM2A-205ENST00000469541 POTEGQ6S5H5 508 aa11.54□□□□□ -0.56
ITM2A-205ENST00000469541 NUDCQ9Y266 331 aa11.54□□□□□ -0.56
ITM2A-205ENST00000469541 ACEP12821 1306 aa11.54□□□□□ -0.56
ITM2A-205ENST00000469541 ADGRL3Q9HAR2 1447 aa11.53□□□□□ -0.56
ITM2A-205ENST00000469541 PDE3BQ13370 1112 aa11.53□□□□□ -0.56
ITM2A-205ENST00000469541 WDR43Q15061 677 aaKnown RBP eCLIP11.53□□□□□ -0.56
ITM2A-205ENST00000469541 SLC39A7Q92504 469 aa11.53□□□□□ -0.56
ITM2A-205ENST00000469541 RNF123Q5XPI4 1314 aa11.53□□□□□ -0.56
ITM2A-205ENST00000469541 MAP2P11137 1827 aaKnown RBP11.52□□□□□ -0.57
ITM2A-205ENST00000469541 NME9Q86XW9 330 aa11.52□□□□□ -0.57
ITM2A-205ENST00000469541 TSPYL2Q9H2G4 693 aaPredicted RBP11.52□□□□□ -0.57
ITM2A-205ENST00000469541 TTC21BQ7Z4L5 1316 aa11.52□□□□□ -0.57
ITM2A-205ENST00000469541 USP54Q70EL1 1684 aa11.52□□□□□ -0.57
ITM2A-205ENST00000469541 OVOS2A0A0J9YW53 1432 aa11.52□□□□□ -0.57
ITM2A-205ENST00000469541 OVOS2Q6IE36 1432 aa11.52□□□□□ -0.57
ITM2A-205ENST00000469541 STRCP1A6NGW2 1772 aa11.51□□□□□ -0.57
ITM2A-205ENST00000469541 IQSEC2Q5JU85 1478 aa11.51□□□□□ -0.57
ITM2A-205ENST00000469541 TNNT2P45379 298 aaPredicted RBP11.51□□□□□ -0.57
ITM2A-205ENST00000469541 PROM2Q8N271 834 aa11.51□□□□□ -0.57
ITM2A-205ENST00000469541 USP31Q70CQ4 1352 aa11.51□□□□□ -0.57
ITM2A-205ENST00000469541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.5□□□□□ -0.57
ITM2A-205ENST00000469541 NGEFQ8N5V2 710 aa11.5□□□□□ -0.57
ITM2A-205ENST00000469541 POLKQ9UBT6 870 aa11.5□□□□□ -0.57
ITM2A-205ENST00000469541 SUPT16HQ9Y5B9 1047 aaKnown RBP11.5□□□□□ -0.57
ITM2A-205ENST00000469541 LMTK3Q96Q04 1460 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms