RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 SPDYE5A6NIY4 337 aa10.62□□□□□ -0.71
VPS8-219ENST00000469479 DESI1Q6ICB0 168 aa10.62□□□□□ -0.71
VPS8-219ENST00000469479 HAP1P54257 671 aaPredicted RBP10.61□□□□□ -0.71
VPS8-219ENST00000469479 RASSF7Q02833 373 aa10.61□□□□□ -0.71
VPS8-219ENST00000469479 LINC01559Q495D7 138 aa10.61□□□□□ -0.71
VPS8-219ENST00000469479 ZNF511Q8NB15 262 aa10.61□□□□□ -0.71
VPS8-219ENST00000469479 SSTR3P32745 418 aaPredicted RBP10.6□□□□□ -0.71
VPS8-219ENST00000469479 NNTQ13423 1086 aa10.6□□□□□ -0.71
VPS8-219ENST00000469479 MRPL14Q6P1L8 145 aaKnown RBP10.6□□□□□ -0.71
VPS8-219ENST00000469479 SPIRE2Q8WWL2 714 aa10.6□□□□□ -0.71
VPS8-219ENST00000469479 KDM2AQ9Y2K7 1162 aa10.6□□□□□ -0.71
VPS8-219ENST00000469479 TLL2Q9Y6L7 1015 aa10.6□□□□□ -0.71
VPS8-219ENST00000469479 PRR7Q8TB68 274 aa10.59□□□□□ -0.71
VPS8-219ENST00000469479 ADH1CP00326 375 aa10.58□□□□□ -0.72
VPS8-219ENST00000469479 RB1CC1Q8TDY2 1594 aa10.57□□□□□ -0.72
VPS8-219ENST00000469479 RNF225M0QZC1 329 aaPredicted RBP10.57□□□□□ -0.72
VPS8-219ENST00000469479 MTMR2Q13614 643 aa10.57□□□□□ -0.72
VPS8-219ENST00000469479 FAM174AQ8TBP5 190 aa10.57□□□□□ -0.72
VPS8-219ENST00000469479 MOXD2PA6NHM9 499 aa10.56□□□□□ -0.72
VPS8-219ENST00000469479 TIMP2P16035 220 aa10.56□□□□□ -0.72
VPS8-219ENST00000469479 NDUFV2P19404 249 aa10.56□□□□□ -0.72
VPS8-219ENST00000469479 WDR4P57081 412 aaKnown RBP10.56□□□□□ -0.72
VPS8-219ENST00000469479 PURBQ96QR8 312 aaKnown RBP10.55□□□□□ -0.72
VPS8-219ENST00000469479 SOBPA7XYQ1 873 aa10.54□□□□□ -0.72
VPS8-219ENST00000469479 GJA5P36382 358 aa10.53□□□□□ -0.72
VPS8-219ENST00000469479 CDK15Q96Q40 435 aa10.53□□□□□ -0.72
VPS8-219ENST00000469479 KLF16Q9BXK1 252 aaPredicted RBP10.53□□□□□ -0.72
VPS8-219ENST00000469479 CTHP32929 405 aa10.52□□□□□ -0.73
VPS8-219ENST00000469479 LYPD8Q6UX82 237 aa10.52□□□□□ -0.73
VPS8-219ENST00000469479 TTLL12Q14166 644 aaPredicted RBP10.51□□□□□ -0.73
VPS8-219ENST00000469479 DIXDC1Q155Q3 683 aa10.51□□□□□ -0.73
VPS8-219ENST00000469479 ADAMTS8Q9UP79 889 aa10.5□□□□□ -0.73
VPS8-219ENST00000469479 MAN1A2O60476 641 aa10.49□□□□□ -0.73
VPS8-219ENST00000469479 NR5A1Q13285 461 aa10.49□□□□□ -0.73
VPS8-219ENST00000469479 PPFIA3O75145 1194 aa10.47□□□□□ -0.73
VPS8-219ENST00000469479 ZIC2O95409 532 aaPredicted RBP10.47□□□□□ -0.73
VPS8-219ENST00000469479 IGHA1P01876 353 aa10.47□□□□□ -0.73
VPS8-219ENST00000469479 ARID5BQ14865 1188 aa10.47□□□□□ -0.73
VPS8-219ENST00000469479 AMHR2Q16671 573 aa10.47□□□□□ -0.73
VPS8-219ENST00000469479 GPAT2Q6NUI2 795 aa10.47□□□□□ -0.73
VPS8-219ENST00000469479 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
VPS8-219ENST00000469479 UPP2O95045 317 aa10.46□□□□□ -0.73
VPS8-219ENST00000469479 VSIG10Q8N0Z9 540 aa10.46□□□□□ -0.73
VPS8-219ENST00000469479 BEGAINQ9BUH8 593 aa10.46□□□□□ -0.73
VPS8-219ENST00000469479 GIGYF2Q6Y7W6 1299 aaKnown RBP10.45□□□□□ -0.74
VPS8-219ENST00000469479 FOXJ1Q92949 421 aa10.45□□□□□ -0.74
VPS8-219ENST00000469479 SPTLC1O15269 473 aa10.44□□□□□ -0.74
VPS8-219ENST00000469479 RSBN1LQ6PCB5 846 aaPredicted RBP10.44□□□□□ -0.74
VPS8-219ENST00000469479 BARGINQ6ZT62 677 aa10.44□□□□□ -0.74
VPS8-219ENST00000469479 ITPKCQ96DU7 683 aa10.44□□□□□ -0.74
VPS8-219ENST00000469479 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
VPS8-219ENST00000469479 AGERQ15109 404 aa10.43□□□□□ -0.74
VPS8-219ENST00000469479 C6orf118Q5T5N4 469 aa10.43□□□□□ -0.74
VPS8-219ENST00000469479 BPHLQ86WA6 291 aaPredicted RBP10.43□□□□□ -0.74
VPS8-219ENST00000469479 TBC1D2Q9BYX2 928 aa10.43□□□□□ -0.74
VPS8-219ENST00000469479 ZBTB3Q9H5J0 574 aa10.43□□□□□ -0.74
VPS8-219ENST00000469479 DNMT3AQ9Y6K1 912 aaPredicted RBP10.43□□□□□ -0.74
VPS8-219ENST00000469479 F12P00748 615 aaPredicted RBP10.42□□□□□ -0.74
VPS8-219ENST00000469479 GRM5P41594 1212 aa10.42□□□□□ -0.74
VPS8-219ENST00000469479 NACADO15069 1562 aa10.42□□□□□ -0.74
VPS8-219ENST00000469479 CFAP99D6REC4 459 aa10.41□□□□□ -0.74
VPS8-219ENST00000469479 BMP2P12643 396 aa10.41□□□□□ -0.74
VPS8-219ENST00000469479 HRCP23327 699 aa10.41□□□□□ -0.74
VPS8-219ENST00000469479 XP32Q5T750 250 aa10.41□□□□□ -0.74
VPS8-219ENST00000469479 PRPF38BQ5VTL8 546 aaKnown RBP10.41□□□□□ -0.74
VPS8-219ENST00000469479 CNTNAP3BQ96NU0 1288 aa10.41□□□□□ -0.74
VPS8-219ENST00000469479 CNTNAP3Q9BZ76 1288 aa10.41□□□□□ -0.74
VPS8-219ENST00000469479 MAP10Q9P2G4 905 aa10.41□□□□□ -0.74
VPS8-219ENST00000469479 NR3C2P08235 984 aa10.4□□□□□ -0.74
VPS8-219ENST00000469479 PCDHB15Q9Y5E8 787 aa10.4□□□□□ -0.74
VPS8-219ENST00000469479 LINC00528Q8N1L1 170 aa10.39□□□□□ -0.75
VPS8-219ENST00000469479 MEIOBQ8N635 442 aa10.39□□□□□ -0.75
VPS8-219ENST00000469479 ARMC2Q8NEN0 867 aa10.39□□□□□ -0.75
VPS8-219ENST00000469479 ZMYND10O75800 440 aa10.38□□□□□ -0.75
VPS8-219ENST00000469479 IRS1P35568 1242 aa10.38□□□□□ -0.75
VPS8-219ENST00000469479 FOXK2Q01167 660 aa10.38□□□□□ -0.75
VPS8-219ENST00000469479 SOS2Q07890 1332 aaPredicted RBP10.37□□□□□ -0.75
VPS8-219ENST00000469479 KRT76Q01546 638 aa10.37□□□□□ -0.75
VPS8-219ENST00000469479 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
VPS8-219ENST00000469479 RIC3Q7Z5B4 369 aa10.36□□□□□ -0.75
VPS8-219ENST00000469479 SVOPQ8N4V2 548 aa10.36□□□□□ -0.75
VPS8-219ENST00000469479 TSEN34Q9BSV6 310 aaKnown RBP10.36□□□□□ -0.75
VPS8-219ENST00000469479 GPR161Q8N6U8 529 aaKnown RBP10.35□□□□□ -0.75
VPS8-219ENST00000469479 MAP4K5Q9Y4K4 846 aa10.35□□□□□ -0.75
VPS8-219ENST00000469479 C1QTNF2Q9BXJ5 285 aa10.34□□□□□ -0.75
VPS8-219ENST00000469479 DNMT3LQ9UJW3 386 aa10.34□□□□□ -0.75
VPS8-219ENST00000469479 EMILIN1Q9Y6C2 1016 aa10.34□□□□□ -0.75
VPS8-219ENST00000469479 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.33□□□□□ -0.76
VPS8-219ENST00000469479 ZNF385CQ66K41 422 aaPredicted RBP10.33□□□□□ -0.76
VPS8-219ENST00000469479 KANK3Q6NY19 840 aa10.33□□□□□ -0.76
VPS8-219ENST00000469479 MARSP56192 900 aaKnown RBP10.32□□□□□ -0.76
VPS8-219ENST00000469479 NBPF14Q5TI25 921 aa10.32□□□□□ -0.76
VPS8-219ENST00000469479 TRMT44Q8IYL2 757 aaKnown RBP10.32□□□□□ -0.76
VPS8-219ENST00000469479 PER1O15534 1290 aaPredicted RBP10.31□□□□□ -0.76
VPS8-219ENST00000469479 FSHRP23945 695 aa10.31□□□□□ -0.76
VPS8-219ENST00000469479 VASH1Q7L8A9 365 aaPredicted RBP10.31□□□□□ -0.76
VPS8-219ENST00000469479 SH3RF1Q7Z6J0 888 aa10.31□□□□□ -0.76
VPS8-219ENST00000469479 PARP9Q8IXQ6 854 aa10.31□□□□□ -0.76
VPS8-219ENST00000469479 CABLES1Q8TDN4 633 aa10.31□□□□□ -0.76
VPS8-219ENST00000469479 COL25A1Q9BXS0 654 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms