RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 ADGRB2O60241 1585 aa19.01■□□□□ 0.63
TRAPPC12-216ENST00000469400 COL14A1Q05707 1796 aaKnown RBP19.01■□□□□ 0.63
TRAPPC12-216ENST00000469400 MINK1Q8N4C8 1332 aaPredicted RBP19■□□□□ 0.63
TRAPPC12-216ENST00000469400 DISP2A7MBM2 1401 aa19■□□□□ 0.63
TRAPPC12-216ENST00000469400 PRDM11Q9NQV5 511 aa18.99■□□□□ 0.63
TRAPPC12-216ENST00000469400 ALS2Q96Q42 1657 aa18.98■□□□□ 0.63
TRAPPC12-216ENST00000469400 EIF3AQ14152 1382 aaKnown RBP18.98■□□□□ 0.63
TRAPPC12-216ENST00000469400 WASLO00401 505 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC12-216ENST00000469400 PAK3O75914 559 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC12-216ENST00000469400 EZH2Q15910 746 aaKnown RBP18.98■□□□□ 0.63
TRAPPC12-216ENST00000469400 NGDNQ8NEJ9 315 aaKnown RBP18.98■□□□□ 0.63
TRAPPC12-216ENST00000469400 ADGRB1O14514 1584 aa18.98■□□□□ 0.63
TRAPPC12-216ENST00000469400 RGPD1P0DJD0 1748 aa18.97■□□□□ 0.63
TRAPPC12-216ENST00000469400 SPATA31A1Q5TZJ5 1347 aa18.96■□□□□ 0.63
TRAPPC12-216ENST00000469400 THSD7AQ9UPZ6 1657 aa18.95■□□□□ 0.62
TRAPPC12-216ENST00000469400 TULP4Q9NRJ4 1543 aa18.95■□□□□ 0.62
TRAPPC12-216ENST00000469400 CAMKK2Q96RR4 588 aa18.95■□□□□ 0.62
TRAPPC12-216ENST00000469400 TRIM37O94972 964 aa18.94■□□□□ 0.62
TRAPPC12-216ENST00000469400 FAM196AQ6ZSG2 479 aa18.94■□□□□ 0.62
TRAPPC12-216ENST00000469400 KIAA0232Q92628 1395 aa18.93■□□□□ 0.62
TRAPPC12-216ENST00000469400 CHRNA2Q15822 529 aa18.93■□□□□ 0.62
TRAPPC12-216ENST00000469400 STRN4Q9NRL3 753 aa18.92■□□□□ 0.62
TRAPPC12-216ENST00000469400 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
TRAPPC12-216ENST00000469400 TNS1Q9HBL0 1735 aaKnown RBP18.91■□□□□ 0.62
TRAPPC12-216ENST00000469400 APBA3O96018 575 aa18.91■□□□□ 0.62
TRAPPC12-216ENST00000469400 CRYBG1Q9Y4K1 1723 aa18.91■□□□□ 0.62
TRAPPC12-216ENST00000469400 ZC3H6P61129 1189 aaKnown RBP18.89■□□□□ 0.61
TRAPPC12-216ENST00000469400 DCAF11Q8TEB1 546 aa18.89■□□□□ 0.61
TRAPPC12-216ENST00000469400 NUDT16Q96DE0 195 aaKnown RBP18.89■□□□□ 0.61
TRAPPC12-216ENST00000469400 USP35Q9P2H5 1018 aa18.89■□□□□ 0.61
TRAPPC12-216ENST00000469400 NUTM2GQ5VZR2 741 aa18.88■□□□□ 0.61
TRAPPC12-216ENST00000469400 PARD3Q8TEW0 1356 aa18.88■□□□□ 0.61
TRAPPC12-216ENST00000469400 BARGINQ6ZT62 677 aa18.87■□□□□ 0.61
TRAPPC12-216ENST00000469400 ATP7BP35670 1465 aa18.86■□□□□ 0.61
TRAPPC12-216ENST00000469400 EVA1CP58658 441 aa18.86■□□□□ 0.61
TRAPPC12-216ENST00000469400 PDE3BQ13370 1112 aa18.86■□□□□ 0.61
TRAPPC12-216ENST00000469400 SSH2Q76I76 1423 aa18.84■□□□□ 0.61
TRAPPC12-216ENST00000469400 STAC3Q96MF2 364 aa18.84■□□□□ 0.61
TRAPPC12-216ENST00000469400 CDK19Q9BWU1 502 aa18.84■□□□□ 0.61
TRAPPC12-216ENST00000469400 RAB3GAP2Q9H2M9 1393 aa18.83■□□□□ 0.61
TRAPPC12-216ENST00000469400 NBPF8Q3BBV2 869 aa18.83■□□□□ 0.6
TRAPPC12-216ENST00000469400 LARP1Q6PKG0 1096 aaKnown RBP18.83■□□□□ 0.6
TRAPPC12-216ENST00000469400 ACEP12821 1306 aa18.82■□□□□ 0.6
TRAPPC12-216ENST00000469400 NBPF14Q5TI25 921 aa18.82■□□□□ 0.6
TRAPPC12-216ENST00000469400 TCP11L2Q8N4U5 519 aa18.82■□□□□ 0.6
TRAPPC12-216ENST00000469400 PHRF1Q9P1Y6 1649 aaKnown RBP18.82■□□□□ 0.6
TRAPPC12-216ENST00000469400 POLR3AO14802 1390 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC12-216ENST00000469400 CAMTA1Q9Y6Y1 1673 aa18.8■□□□□ 0.6
TRAPPC12-216ENST00000469400 ABTB2Q8N961 1025 aa18.8■□□□□ 0.6
TRAPPC12-216ENST00000469400 CCDC61Q9Y6R9 512 aa18.8■□□□□ 0.6
TRAPPC12-216ENST00000469400 ITSN1Q15811 1721 aa18.8■□□□□ 0.6
TRAPPC12-216ENST00000469400 PLEKHG3A1L390 1219 aa18.79■□□□□ 0.6
TRAPPC12-216ENST00000469400 YY1P25490 414 aa18.79■□□□□ 0.6
TRAPPC12-216ENST00000469400 CPDO75976 1380 aa18.79■□□□□ 0.6
TRAPPC12-216ENST00000469400 ARHGEF28Q8N1W1 1705 aaKnown RBP18.77■□□□□ 0.6
TRAPPC12-216ENST00000469400 RREB1Q92766 1687 aa18.77■□□□□ 0.6
TRAPPC12-216ENST00000469400 THRAP3Q9Y2W1 955 aaKnown RBP18.77■□□□□ 0.6
TRAPPC12-216ENST00000469400 USP19O94966 1318 aa18.76■□□□□ 0.59
TRAPPC12-216ENST00000469400 SPON1Q9HCB6 807 aa18.76■□□□□ 0.59
TRAPPC12-216ENST00000469400 NUP188Q5SRE5 1749 aa18.76■□□□□ 0.59
TRAPPC12-216ENST00000469400 NRKQ7Z2Y5 1582 aa18.76■□□□□ 0.59
TRAPPC12-216ENST00000469400 GCP02774 474 aa18.75■□□□□ 0.59
TRAPPC12-216ENST00000469400 PPP1R1BQ9UD71 204 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC12-216ENST00000469400 LMO7Q8WWI1 1683 aa18.74■□□□□ 0.59
TRAPPC12-216ENST00000469400 KCNQ2O43526 872 aa18.74■□□□□ 0.59
TRAPPC12-216ENST00000469400 NLRP13Q86W25 1043 aa18.74■□□□□ 0.59
TRAPPC12-216ENST00000469400 TOPAZ1Q8N9V7 1692 aa18.73■□□□□ 0.59
TRAPPC12-216ENST00000469400 C11orf95C9JLR9 678 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC12-216ENST00000469400 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC12-216ENST00000469400 NINLQ9Y2I6 1382 aa18.69■□□□□ 0.58
TRAPPC12-216ENST00000469400 CRB1P82279 1406 aa18.69■□□□□ 0.58
TRAPPC12-216ENST00000469400 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
TRAPPC12-216ENST00000469400 SRPK2P78362 688 aaKnown RBP18.69■□□□□ 0.58
TRAPPC12-216ENST00000469400 OVOS2A0A0G2JMS6 1433 aa18.68■□□□□ 0.58
TRAPPC12-216ENST00000469400 OVOS2A0A0J9YW53 1432 aa18.68■□□□□ 0.58
TRAPPC12-216ENST00000469400 OVOS2Q6IE36 1432 aa18.68■□□□□ 0.58
TRAPPC12-216ENST00000469400 PPIP5K1Q6PFW1 1433 aa18.68■□□□□ 0.58
TRAPPC12-216ENST00000469400 PLSCR1O15162 318 aa18.68■□□□□ 0.58
TRAPPC12-216ENST00000469400 NBPF1Q3BBV0 1214 aa18.68■□□□□ 0.58
TRAPPC12-216ENST00000469400 PARP4Q9UKK3 1724 aaKnown RBP18.68■□□□□ 0.58
TRAPPC12-216ENST00000469400 ZBTB7CA1YPR0 619 aa18.67■□□□□ 0.58
TRAPPC12-216ENST00000469400 CABP2Q9NPB3 220 aa18.67■□□□□ 0.58
TRAPPC12-216ENST00000469400 DDB1Q16531 1140 aa18.66■□□□□ 0.58
TRAPPC12-216ENST00000469400 PTF1AQ7RTS3 328 aa18.66■□□□□ 0.58
TRAPPC12-216ENST00000469400 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC12-216ENST00000469400 AATKQ6ZMQ8 1374 aa18.66■□□□□ 0.58
TRAPPC12-216ENST00000469400 NLRP6P59044 892 aa18.65■□□□□ 0.58
TRAPPC12-216ENST00000469400 BCL11BQ9C0K0 894 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC12-216ENST00000469400 PEAK1Q9H792 1746 aa18.65■□□□□ 0.58
TRAPPC12-216ENST00000469400 BRD4O60885 1362 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC12-216ENST00000469400 TOM1L2Q6ZVM7 507 aa18.64■□□□□ 0.57
TRAPPC12-216ENST00000469400 PROM2Q8N271 834 aa18.63■□□□□ 0.57
TRAPPC12-216ENST00000469400 PDGFDQ9GZP0 370 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC12-216ENST00000469400 CABP1Q9NZU7 370 aa18.63■□□□□ 0.57
TRAPPC12-216ENST00000469400 CENPJQ9HC77 1338 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC12-216ENST00000469400 AXIN2Q9Y2T1 843 aa18.62■□□□□ 0.57
TRAPPC12-216ENST00000469400 USP6P35125 1406 aa18.61■□□□□ 0.57
TRAPPC12-216ENST00000469400 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC12-216ENST00000469400 RGPD3A6NKT7 1758 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC12-216ENST00000469400 RGPD4Q7Z3J3 1758 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms