RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 C8orf37Q96NL8 207 aa20.73■□□□□ 0.91
TMEM39A-205ENST00000468676 EIF4G2P78344 907 aaKnown RBP eCLIP20.72■□□□□ 0.91
TMEM39A-205ENST00000468676 NGLY1Q96IV0 654 aa20.72■□□□□ 0.91
TMEM39A-205ENST00000468676 NINLQ9Y2I6 1382 aa20.72■□□□□ 0.91
TMEM39A-205ENST00000468676 USP6P35125 1406 aa20.71■□□□□ 0.91
TMEM39A-205ENST00000468676 AFF2P51816 1311 aa20.7■□□□□ 0.9
TMEM39A-205ENST00000468676 MARF1Q9Y4F3 1742 aaKnown RBP20.7■□□□□ 0.9
TMEM39A-205ENST00000468676 ABTB2Q8N961 1025 aa20.69■□□□□ 0.9
TMEM39A-205ENST00000468676 TMC1Q8TDI8 760 aa20.69■□□□□ 0.9
TMEM39A-205ENST00000468676 CPSF1Q10570 1443 aaKnown RBP20.69■□□□□ 0.9
TMEM39A-205ENST00000468676 AKAP12Q02952 1782 aa20.68■□□□□ 0.9
TMEM39A-205ENST00000468676 CABLES1Q8TDN4 633 aa20.68■□□□□ 0.9
TMEM39A-205ENST00000468676 TERF2IPQ9NYB0 399 aa20.68■□□□□ 0.9
TMEM39A-205ENST00000468676 HDGFL2Q7Z4V5 671 aaPredicted RBP20.67■□□□□ 0.9
TMEM39A-205ENST00000468676 FNBP4Q8N3X1 1017 aaPredicted RBP20.67■□□□□ 0.9
TMEM39A-205ENST00000468676 KTN1Q86UP2 1357 aaKnown RBP20.67■□□□□ 0.9
TMEM39A-205ENST00000468676 POTEAQ6S8J7 498 aa20.66■□□□□ 0.9
TMEM39A-205ENST00000468676 NLRP13Q86W25 1043 aa20.66■□□□□ 0.9
TMEM39A-205ENST00000468676 SLC12A5Q9H2X9 1139 aa20.66■□□□□ 0.9
TMEM39A-205ENST00000468676 ABCA3Q99758 1704 aa20.66■□□□□ 0.9
TMEM39A-205ENST00000468676 SSH2Q76I76 1423 aa20.65■□□□□ 0.9
TMEM39A-205ENST00000468676 TTC21AQ8NDW8 1320 aa20.65■□□□□ 0.9
TMEM39A-205ENST00000468676 ILDR2Q71H61 639 aa20.65■□□□□ 0.9
TMEM39A-205ENST00000468676 PLEKHG5O94827 1062 aa20.64■□□□□ 0.89
TMEM39A-205ENST00000468676 HSPA5P11021 654 aaKnown RBP20.64■□□□□ 0.89
TMEM39A-205ENST00000468676 TTC21BQ7Z4L5 1316 aa20.63■□□□□ 0.89
TMEM39A-205ENST00000468676 USP21Q9UK80 565 aa20.63■□□□□ 0.89
TMEM39A-205ENST00000468676 MON2Q7Z3U7 1717 aa20.62■□□□□ 0.89
TMEM39A-205ENST00000468676 NUTM2GQ5VZR2 741 aa20.62■□□□□ 0.89
TMEM39A-205ENST00000468676 CRYBG1Q9Y4K1 1723 aa20.61■□□□□ 0.89
TMEM39A-205ENST00000468676 USP19O94966 1318 aa20.61■□□□□ 0.89
TMEM39A-205ENST00000468676 NLRP6P59044 892 aa20.61■□□□□ 0.89
TMEM39A-205ENST00000468676 QTRT2Q9H974 415 aaKnown RBP20.61■□□□□ 0.89
TMEM39A-205ENST00000468676 CD163L1Q9NR16 1453 aa20.61■□□□□ 0.89
TMEM39A-205ENST00000468676 TRPC5Q9UL62 973 aaPredicted RBP20.6■□□□□ 0.89
TMEM39A-205ENST00000468676 RXRBP28702 533 aa20.59■□□□□ 0.89
TMEM39A-205ENST00000468676 EDC4Q6P2E9 1401 aaKnown RBP20.59■□□□□ 0.89
TMEM39A-205ENST00000468676 A0A1W2PP64 1363 aa20.59■□□□□ 0.89
TMEM39A-205ENST00000468676 SLIT2O94813 1529 aa20.58■□□□□ 0.89
TMEM39A-205ENST00000468676 PHRF1Q9P1Y6 1649 aaKnown RBP20.58■□□□□ 0.89
TMEM39A-205ENST00000468676 FAM83GA6ND36 823 aa20.58■□□□□ 0.89
TMEM39A-205ENST00000468676 UNC5CLQ8IV45 518 aa20.58■□□□□ 0.89
TMEM39A-205ENST00000468676 NRKQ7Z2Y5 1582 aa20.58■□□□□ 0.88
TMEM39A-205ENST00000468676 ANKRD36BQ8N2N9 1353 aa20.58■□□□□ 0.88
TMEM39A-205ENST00000468676 BCL9LQ86UU0 1499 aa20.57■□□□□ 0.88
TMEM39A-205ENST00000468676 GCP02774 474 aa20.57■□□□□ 0.88
TMEM39A-205ENST00000468676 PRDM11Q9NQV5 511 aa20.57■□□□□ 0.88
TMEM39A-205ENST00000468676 NWD2Q9ULI1 1742 aa20.57■□□□□ 0.88
TMEM39A-205ENST00000468676 PIK3C2AO00443 1686 aa20.57■□□□□ 0.88
TMEM39A-205ENST00000468676 RBM6P78332 1123 aaKnown RBP20.56■□□□□ 0.88
TMEM39A-205ENST00000468676 COL14A1Q05707 1796 aaKnown RBP20.56■□□□□ 0.88
TMEM39A-205ENST00000468676 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.56■□□□□ 0.88
TMEM39A-205ENST00000468676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.55■□□□□ 0.88
TMEM39A-205ENST00000468676 CPDO75976 1380 aa20.55■□□□□ 0.88
TMEM39A-205ENST00000468676 ATRNO75882 1429 aa20.54■□□□□ 0.88
TMEM39A-205ENST00000468676 KCNH5Q8NCM2 988 aa20.54■□□□□ 0.88
TMEM39A-205ENST00000468676 KIAA0232Q92628 1395 aa20.54■□□□□ 0.88
TMEM39A-205ENST00000468676 PLCH1Q4KWH8 1693 aa20.54■□□□□ 0.88
TMEM39A-205ENST00000468676 ZC3H6P61129 1189 aaKnown RBP20.53■□□□□ 0.88
TMEM39A-205ENST00000468676 USP31Q70CQ4 1352 aa20.53■□□□□ 0.88
TMEM39A-205ENST00000468676 SLIT3O75094 1523 aa20.53■□□□□ 0.88
TMEM39A-205ENST00000468676 CDK12Q9NYV4 1490 aaPredicted RBP20.52■□□□□ 0.88
TMEM39A-205ENST00000468676 BTG4Q9NY30 223 aa20.51■□□□□ 0.87
TMEM39A-205ENST00000468676 VPS72Q15906 364 aa20.5■□□□□ 0.87
TMEM39A-205ENST00000468676 NME9Q86XW9 330 aa20.5■□□□□ 0.87
TMEM39A-205ENST00000468676 GJD4Q96KN9 370 aaPredicted RBP20.5■□□□□ 0.87
TMEM39A-205ENST00000468676 MYOM1P52179 1685 aa20.49■□□□□ 0.87
TMEM39A-205ENST00000468676 USP54Q70EL1 1684 aa20.49■□□□□ 0.87
TMEM39A-205ENST00000468676 SOCS7O14512 581 aa20.48■□□□□ 0.87
TMEM39A-205ENST00000468676 CHRNA2Q15822 529 aa20.48■□□□□ 0.87
TMEM39A-205ENST00000468676 POLR3GLQ9BT43 218 aa20.48■□□□□ 0.87
TMEM39A-205ENST00000468676 POTEDQ86YR6 584 aa20.47■□□□□ 0.87
TMEM39A-205ENST00000468676 AATKQ6ZMQ8 1374 aa20.46■□□□□ 0.87
TMEM39A-205ENST00000468676 NRAPQ86VF7 1730 aa20.45■□□□□ 0.86
TMEM39A-205ENST00000468676 ARHGEF25Q86VW2 580 aa20.45■□□□□ 0.86
TMEM39A-205ENST00000468676 COG3Q96JB2 828 aa20.45■□□□□ 0.86
TMEM39A-205ENST00000468676 ZRANB1Q9UGI0 708 aa20.45■□□□□ 0.86
TMEM39A-205ENST00000468676 CCDC9Q9Y3X0 531 aaKnown RBP20.45■□□□□ 0.86
TMEM39A-205ENST00000468676 EVA1CP58658 441 aa20.44■□□□□ 0.86
TMEM39A-205ENST00000468676 OVOS2A0A0J9YW53 1432 aa20.44■□□□□ 0.86
TMEM39A-205ENST00000468676 OVOS2Q6IE36 1432 aa20.44■□□□□ 0.86
TMEM39A-205ENST00000468676 C11orf95C9JLR9 678 aaPredicted RBP20.43■□□□□ 0.86
TMEM39A-205ENST00000468676 CARD14Q9BXL6 1004 aa20.43■□□□□ 0.86
TMEM39A-205ENST00000468676 NFAT5O94916 1531 aa20.43■□□□□ 0.86
TMEM39A-205ENST00000468676 LMO7Q8WWI1 1683 aa20.42■□□□□ 0.86
TMEM39A-205ENST00000468676 FYB1O15117 783 aa20.42■□□□□ 0.86
TMEM39A-205ENST00000468676 SOX12O15370 315 aa20.42■□□□□ 0.86
TMEM39A-205ENST00000468676 CAMTA1Q9Y6Y1 1673 aa20.42■□□□□ 0.86
TMEM39A-205ENST00000468676 ZBTB7CA1YPR0 619 aa20.41■□□□□ 0.86
TMEM39A-205ENST00000468676 STRN4Q9NRL3 753 aa20.41■□□□□ 0.86
TMEM39A-205ENST00000468676 RGS12O14924 1447 aa20.4■□□□□ 0.86
TMEM39A-205ENST00000468676 ABCC6O95255 1503 aa20.4■□□□□ 0.86
TMEM39A-205ENST00000468676 CGNL1Q0VF96 1302 aa20.4■□□□□ 0.86
TMEM39A-205ENST00000468676 SPATA31A5Q5VU36 1347 aa20.4■□□□□ 0.86
TMEM39A-205ENST00000468676 SPATA31A7Q8IWB4 1347 aa20.4■□□□□ 0.86
TMEM39A-205ENST00000468676 NSD3Q9BZ95 1437 aa20.4■□□□□ 0.86
TMEM39A-205ENST00000468676 GLI3P10071 1580 aa20.39■□□□□ 0.85
TMEM39A-205ENST00000468676 KIF7Q2M1P5 1343 aa20.39■□□□□ 0.85
TMEM39A-205ENST00000468676 ONECUT3O60422 494 aaPredicted RBP20.39■□□□□ 0.85
TMEM39A-205ENST00000468676 COL18A1P39060 1754 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms