RNA–Protein interactions for RNA: ENST00000468479.5

FDPS-207, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 938 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-207ENST00000468479 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
FDPS-207ENST00000468479 TNS3Q68CZ2 1445 aa18.31■□□□□ 0.52
FDPS-207ENST00000468479 TRPC5Q9UL62 973 aaPredicted RBP18.3■□□□□ 0.52
FDPS-207ENST00000468479 TULP4Q9NRJ4 1543 aa18.29■□□□□ 0.52
FDPS-207ENST00000468479 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
FDPS-207ENST00000468479 PMFBP1Q8TBY8 1022 aa18.29■□□□□ 0.52
FDPS-207ENST00000468479 PRKRIP1Q9H875 184 aaPredicted RBP18.29■□□□□ 0.52
FDPS-207ENST00000468479 EP400Q96L91 3159 aa18.28■□□□□ 0.52
FDPS-207ENST00000468479 NGDNQ8NEJ9 315 aaKnown RBP18.28■□□□□ 0.52
FDPS-207ENST00000468479 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
FDPS-207ENST00000468479 NUDT16Q96DE0 195 aaKnown RBP18.25■□□□□ 0.51
FDPS-207ENST00000468479 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
FDPS-207ENST00000468479 CENPJQ9HC77 1338 aaPredicted RBP18.24■□□□□ 0.51
FDPS-207ENST00000468479 CDK19Q9BWU1 502 aa18.24■□□□□ 0.51
FDPS-207ENST00000468479 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
FDPS-207ENST00000468479 CCDC61Q9Y6R9 512 aa18.23■□□□□ 0.51
FDPS-207ENST00000468479 PUS7Q96PZ0 661 aaKnown RBP18.22■□□□□ 0.51
FDPS-207ENST00000468479 ARHGEF28Q8N1W1 1705 aaKnown RBP18.21■□□□□ 0.51
FDPS-207ENST00000468479 PAK3O75914 559 aaPredicted RBP18.21■□□□□ 0.51
FDPS-207ENST00000468479 SRPK2P78362 688 aaKnown RBP18.21■□□□□ 0.51
FDPS-207ENST00000468479 RALBP1Q15311 655 aa18.21■□□□□ 0.51
FDPS-207ENST00000468479 ATRNO75882 1429 aa18.21■□□□□ 0.51
FDPS-207ENST00000468479 ATP7BP35670 1465 aa18.2■□□□□ 0.5
FDPS-207ENST00000468479 USP32Q8NFA0 1604 aa18.2■□□□□ 0.5
FDPS-207ENST00000468479 UNC5CLQ8IV45 518 aa18.2■□□□□ 0.5
FDPS-207ENST00000468479 BRWD3Q6RI45 1802 aa18.2■□□□□ 0.5
FDPS-207ENST00000468479 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.2■□□□□ 0.5
FDPS-207ENST00000468479 LRP5O75197 1615 aa18.2■□□□□ 0.5
FDPS-207ENST00000468479 BCL9LQ86UU0 1499 aa18.18■□□□□ 0.5
FDPS-207ENST00000468479 PLEKHG3A1L390 1219 aa18.17■□□□□ 0.5
FDPS-207ENST00000468479 PER1O15534 1290 aaPredicted RBP18.17■□□□□ 0.5
FDPS-207ENST00000468479 PLEKHG5O94827 1062 aa18.17■□□□□ 0.5
FDPS-207ENST00000468479 CABLES1Q8TDN4 633 aa18.17■□□□□ 0.5
FDPS-207ENST00000468479 GJD4Q96KN9 370 aaPredicted RBP18.17■□□□□ 0.5
FDPS-207ENST00000468479 SLIT2O94813 1529 aa18.16■□□□□ 0.5
FDPS-207ENST00000468479 EVC2Q86UK5 1308 aa18.16■□□□□ 0.5
FDPS-207ENST00000468479 POLR3AO14802 1390 aaPredicted RBP18.15■□□□□ 0.5
FDPS-207ENST00000468479 ITSN1Q15811 1721 aa18.15■□□□□ 0.5
FDPS-207ENST00000468479 RGPD8O14715 1765 aaPredicted RBP18.14■□□□□ 0.5
FDPS-207ENST00000468479 CCDC125Q86Z20 511 aa18.14■□□□□ 0.49
FDPS-207ENST00000468479 PANK3Q9H999 370 aa18.14■□□□□ 0.49
FDPS-207ENST00000468479 ACEP12821 1306 aa18.14■□□□□ 0.49
FDPS-207ENST00000468479 BRD4O60885 1362 aaPredicted RBP18.13■□□□□ 0.49
FDPS-207ENST00000468479 VPS72Q15906 364 aa18.12■□□□□ 0.49
FDPS-207ENST00000468479 CABP2Q9NPB3 220 aa18.12■□□□□ 0.49
FDPS-207ENST00000468479 CCDC9Q9Y3X0 531 aaKnown RBP18.12■□□□□ 0.49
FDPS-207ENST00000468479 NPC1L1Q9UHC9 1359 aa18.12■□□□□ 0.49
FDPS-207ENST00000468479 QRICH2Q9H0J4 1663 aa18.12■□□□□ 0.49
FDPS-207ENST00000468479 MRS2Q9HD23 443 aa18.11■□□□□ 0.49
FDPS-207ENST00000468479 MYBBP1AQ9BQG0 1328 aaKnown RBP18.11■□□□□ 0.49
FDPS-207ENST00000468479 PARD3Q8TEW0 1356 aa18.11■□□□□ 0.49
FDPS-207ENST00000468479 PPIP5K1Q6PFW1 1433 aa18.11■□□□□ 0.49
FDPS-207ENST00000468479 GLI3P10071 1580 aa18.11■□□□□ 0.49
FDPS-207ENST00000468479 BLMP54132 1417 aaPredicted RBP18.1■□□□□ 0.49
FDPS-207ENST00000468479 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
FDPS-207ENST00000468479 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
FDPS-207ENST00000468479 FAM83GA6ND36 823 aa18.09■□□□□ 0.49
FDPS-207ENST00000468479 KNSTRNQ9Y448 316 aa18.09■□□□□ 0.49
FDPS-207ENST00000468479 ABTB2Q8N961 1025 aa18.08■□□□□ 0.48
FDPS-207ENST00000468479 BTG4Q9NY30 223 aa18.08■□□□□ 0.48
FDPS-207ENST00000468479 NINLQ9Y2I6 1382 aa18.07■□□□□ 0.48
FDPS-207ENST00000468479 ALS2Q96Q42 1657 aa18.07■□□□□ 0.48
FDPS-207ENST00000468479 NLRP13Q86W25 1043 aa18.07■□□□□ 0.48
FDPS-207ENST00000468479 CABP1Q9NZU7 370 aa18.06■□□□□ 0.48
FDPS-207ENST00000468479 MYOM1P52179 1685 aa18.06■□□□□ 0.48
FDPS-207ENST00000468479 TOPAZ1Q8N9V7 1692 aa18.06■□□□□ 0.48
FDPS-207ENST00000468479 ZNF692Q9BU19 519 aaPredicted RBP18.05■□□□□ 0.48
FDPS-207ENST00000468479 PLCH1Q4KWH8 1693 aa18.05■□□□□ 0.48
FDPS-207ENST00000468479 TMC1Q8TDI8 760 aa18.04■□□□□ 0.48
FDPS-207ENST00000468479 NWD2Q9ULI1 1742 aa18.03■□□□□ 0.48
FDPS-207ENST00000468479 A0A0G2JS52 829 aa18.03■□□□□ 0.48
FDPS-207ENST00000468479 MYT1Q01538 1121 aa18.03■□□□□ 0.48
FDPS-207ENST00000468479 NUTM2GQ5VZR2 741 aa18.03■□□□□ 0.48
FDPS-207ENST00000468479 SEPT12Q8IYM1 358 aa18.03■□□□□ 0.48
FDPS-207ENST00000468479 ABCA3Q99758 1704 aa18.03■□□□□ 0.48
FDPS-207ENST00000468479 KIAA0232Q92628 1395 aa18.03■□□□□ 0.48
FDPS-207ENST00000468479 ONECUT3O60422 494 aaPredicted RBP18.02■□□□□ 0.48
FDPS-207ENST00000468479 SF3B2Q13435 895 aaKnown RBP18.02■□□□□ 0.48
FDPS-207ENST00000468479 AMER1Q5JTC6 1135 aaPredicted RBP18.02■□□□□ 0.48
FDPS-207ENST00000468479 DEFB132Q7Z7B7 95 aa18.02■□□□□ 0.48
FDPS-207ENST00000468479 COL14A1Q05707 1796 aaKnown RBP18.02■□□□□ 0.47
FDPS-207ENST00000468479 USP6P35125 1406 aa18.01■□□□□ 0.47
FDPS-207ENST00000468479 CCDC184Q52MB2 194 aa18.01■□□□□ 0.47
FDPS-207ENST00000468479 USP19O94966 1318 aa18■□□□□ 0.47
FDPS-207ENST00000468479 ZC3H6P61129 1189 aaKnown RBP18■□□□□ 0.47
FDPS-207ENST00000468479 INSRP06213 1382 aa18■□□□□ 0.47
FDPS-207ENST00000468479 EVA1CP58658 441 aa17.99■□□□□ 0.47
FDPS-207ENST00000468479 NLRP6P59044 892 aa17.99■□□□□ 0.47
FDPS-207ENST00000468479 PNISRQ8TF01 805 aaKnown RBP17.99■□□□□ 0.47
FDPS-207ENST00000468479 CPDO75976 1380 aa17.99■□□□□ 0.47
FDPS-207ENST00000468479 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
FDPS-207ENST00000468479 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
FDPS-207ENST00000468479 GCP02774 474 aa17.98■□□□□ 0.47
FDPS-207ENST00000468479 KRT27Q7Z3Y8 459 aa17.98■□□□□ 0.47
FDPS-207ENST00000468479 RGPD1P0DJD0 1748 aa17.98■□□□□ 0.47
FDPS-207ENST00000468479 CHRNA2Q15822 529 aa17.97■□□□□ 0.47
FDPS-207ENST00000468479 FAM98CQ17RN3 349 aaKnown RBP17.97■□□□□ 0.47
FDPS-207ENST00000468479 TTC21AQ8NDW8 1320 aa17.97■□□□□ 0.47
FDPS-207ENST00000468479 HNRNPUQ00839 825 aaKnown RBP eCLIP17.96■□□□□ 0.473e-6■■■□□ 17.5
FDPS-207ENST00000468479 CC2D1BQ5T0F9 858 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms