RNA–Protein interactions for RNA: ENST00000467728.5

NR1H3-217, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-217ENST00000467728 PRPF40AO75400 957 aaKnown RBP16.02■□□□□ 0.15
NR1H3-217ENST00000467728 ZSCAN20P17040 1043 aaPredicted RBP16.02■□□□□ 0.15
NR1H3-217ENST00000467728 FGD1P98174 961 aa16.02■□□□□ 0.15
NR1H3-217ENST00000467728 CSPP1Q1MSJ5 1256 aa16.02■□□□□ 0.15
NR1H3-217ENST00000467728 TBC1D9Q6ZT07 1266 aa16.02■□□□□ 0.15
NR1H3-217ENST00000467728 ATF7IPQ6VMQ6 1270 aa16.01■□□□□ 0.15
NR1H3-217ENST00000467728 CCDC94Q9BW85 323 aaPredicted RBP16.01■□□□□ 0.15
NR1H3-217ENST00000467728 ZBTB40Q9NUA8 1239 aa16.01■□□□□ 0.15
NR1H3-217ENST00000467728 DMTNQ08495 405 aa16.01■□□□□ 0.15
NR1H3-217ENST00000467728 ANKRD45Q5TZF3 282 aa16■□□□□ 0.15
NR1H3-217ENST00000467728 RIMBP3CA6NJZ7 1639 aa16■□□□□ 0.15
NR1H3-217ENST00000467728 RIMBP3BA6NNM3 1639 aa16■□□□□ 0.15
NR1H3-217ENST00000467728 RIMBP3Q9UFD9 1639 aa16■□□□□ 0.15
NR1H3-217ENST00000467728 MTHFSP49914 203 aa16■□□□□ 0.15
NR1H3-217ENST00000467728 MPNDQ8N594 471 aa16■□□□□ 0.15
NR1H3-217ENST00000467728 RNF214Q8ND24 703 aa16■□□□□ 0.15
NR1H3-217ENST00000467728 GPT2Q8TD30 523 aa16■□□□□ 0.15
NR1H3-217ENST00000467728 BMP2KLQ5H9B9 411 aa15.99■□□□□ 0.15
NR1H3-217ENST00000467728 UHRF1BP1LA0JNW5 1464 aa15.99■□□□□ 0.15
NR1H3-217ENST00000467728 IQGAP1P46940 1657 aa15.99■□□□□ 0.15
NR1H3-217ENST00000467728 SYCE3A1L190 88 aa15.98■□□□□ 0.15
NR1H3-217ENST00000467728 CBX1P83916 185 aa15.98■□□□□ 0.15
NR1H3-217ENST00000467728 KIF16BQ96L93 1317 aa15.98■□□□□ 0.15
NR1H3-217ENST00000467728 NSFL1CQ9UNZ2 370 aaKnown RBP15.98■□□□□ 0.15
NR1H3-217ENST00000467728 IQSEC2Q5JU85 1478 aa15.98■□□□□ 0.15
NR1H3-217ENST00000467728 FAM177BA6PVY3 158 aa15.97■□□□□ 0.15
NR1H3-217ENST00000467728 U2AF1L5P0DN76 240 aaPredicted RBP15.97■□□□□ 0.15
NR1H3-217ENST00000467728 U2AF1Q01081 240 aaKnown RBP eCLIP15.97■□□□□ 0.15
NR1H3-217ENST00000467728 CCDC27Q2M243 656 aa15.97■□□□□ 0.15
NR1H3-217ENST00000467728 DNTTIP2Q5QJE6 756 aaKnown RBP15.97■□□□□ 0.15
NR1H3-217ENST00000467728 TMEM63CQ9P1W3 806 aa15.96■□□□□ 0.15
NR1H3-217ENST00000467728 CCDC39Q9UFE4 941 aa15.96■□□□□ 0.15
NR1H3-217ENST00000467728 ZCCHC11Q5TAX3 1644 aaKnown RBP15.96■□□□□ 0.15
NR1H3-217ENST00000467728 CFAP70Q5T0N1 1121 aa15.96■□□□□ 0.15
NR1H3-217ENST00000467728 MCM5P33992 734 aa15.96■□□□□ 0.14
NR1H3-217ENST00000467728 UTP14CQ5TAP6 766 aaKnown RBP15.96■□□□□ 0.14
NR1H3-217ENST00000467728 C1orf115Q9H7X2 142 aa15.96■□□□□ 0.14
NR1H3-217ENST00000467728 ARHGEF5Q12774 1597 aa15.95■□□□□ 0.14
NR1H3-217ENST00000467728 MADDQ8WXG6 1647 aa15.95■□□□□ 0.14
NR1H3-217ENST00000467728 FOXD4L5Q5VV16 416 aaPredicted RBP15.95■□□□□ 0.14
NR1H3-217ENST00000467728 FOXD4L4Q8WXT5 416 aaPredicted RBP15.95■□□□□ 0.14
NR1H3-217ENST00000467728 KANK1Q14678 1352 aa15.95■□□□□ 0.14
NR1H3-217ENST00000467728 PTMAP06454 111 aaKnown RBP15.95■□□□□ 0.14
NR1H3-217ENST00000467728 NUCB2P80303 420 aa15.95■□□□□ 0.14
NR1H3-217ENST00000467728 ZNF710Q8N1W2 664 aa15.95■□□□□ 0.14
NR1H3-217ENST00000467728 ZGPATQ8N5A5 531 aaKnown RBP15.95■□□□□ 0.14
NR1H3-217ENST00000467728 SLC12A5Q9H2X9 1139 aa15.94■□□□□ 0.14
NR1H3-217ENST00000467728 SHPRHQ149N8 1683 aa15.94■□□□□ 0.14
NR1H3-217ENST00000467728 CYP2E1P05181 493 aaPredicted RBP15.94■□□□□ 0.14
NR1H3-217ENST00000467728 LRSAM1Q6UWE0 723 aa15.94■□□□□ 0.14
NR1H3-217ENST00000467728 ERVK-7P63135 1459 aa15.94■□□□□ 0.14
NR1H3-217ENST00000467728 RSPH4AQ5TD94 716 aa15.93■□□□□ 0.14
NR1H3-217ENST00000467728 ZNF830Q96NB3 372 aaPredicted RBP15.93■□□□□ 0.14
NR1H3-217ENST00000467728 KDM5AP29375 1690 aaKnown RBP15.93■□□□□ 0.14
NR1H3-217ENST00000467728 MYRIPQ8NFW9 859 aa15.93■□□□□ 0.14
NR1H3-217ENST00000467728 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.93■□□□□ 0.14
NR1H3-217ENST00000467728 NSD3Q9BZ95 1437 aa15.93■□□□□ 0.14
NR1H3-217ENST00000467728 SAMD9LQ8IVG5 1584 aa15.92■□□□□ 0.14
NR1H3-217ENST00000467728 CYB5RLQ6IPT4 315 aa15.92■□□□□ 0.14
NR1H3-217ENST00000467728 UNC13BO14795 1591 aa15.92■□□□□ 0.14
NR1H3-217ENST00000467728 ATP10AO60312 1499 aa15.92■□□□□ 0.14
NR1H3-217ENST00000467728 ATP2B3Q16720 1220 aa15.92■□□□□ 0.14
NR1H3-217ENST00000467728 TTC37Q6PGP7 1564 aa15.92■□□□□ 0.14
NR1H3-217ENST00000467728 CEP152O94986 1710 aa15.92■□□□□ 0.14
NR1H3-217ENST00000467728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
NR1H3-217ENST00000467728 ZDHHC9Q9Y397 364 aa15.91■□□□□ 0.14
NR1H3-217ENST00000467728 KIAA2012Q0VF49 1180 aa15.91■□□□□ 0.14
NR1H3-217ENST00000467728 C17orf53Q8N3J3 647 aaPredicted RBP15.9■□□□□ 0.14
NR1H3-217ENST00000467728 ARHGAP31Q2M1Z3 1444 aa15.9■□□□□ 0.14
NR1H3-217ENST00000467728 PPP4R3BQ5MIZ7 849 aa15.9■□□□□ 0.14
NR1H3-217ENST00000467728 CFAP53Q96M91 514 aa15.9■□□□□ 0.14
NR1H3-217ENST00000467728 IQGAP3Q86VI3 1631 aa15.9■□□□□ 0.14
NR1H3-217ENST00000467728 CT47B1P0C2W7 299 aaPredicted RBP15.89■□□□□ 0.13
NR1H3-217ENST00000467728 CDC42BPBQ9Y5S2 1711 aa15.89■□□□□ 0.13
NR1H3-217ENST00000467728 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
NR1H3-217ENST00000467728 RABEP1Q15276 862 aa15.89■□□□□ 0.13
NR1H3-217ENST00000467728 SYCP2Q9BX26 1530 aa15.89■□□□□ 0.13
NR1H3-217ENST00000467728 IGSF3O75054 1194 aa15.88■□□□□ 0.13
NR1H3-217ENST00000467728 CDC45O75419 566 aa15.88■□□□□ 0.13
NR1H3-217ENST00000467728 BBXQ8WY36 941 aaPredicted RBP15.88■□□□□ 0.13
NR1H3-217ENST00000467728 TRIM35Q9UPQ4 493 aa15.88■□□□□ 0.13
NR1H3-217ENST00000467728 U2SURPO15042 1029 aaKnown RBP15.87■□□□□ 0.13
NR1H3-217ENST00000467728 GSPT1P15170 499 aaKnown RBP15.87■□□□□ 0.13
NR1H3-217ENST00000467728 PPIP5K1Q6PFW1 1433 aa15.87■□□□□ 0.13
NR1H3-217ENST00000467728 PREX2Q70Z35 1606 aa15.87■□□□□ 0.13
NR1H3-217ENST00000467728 IPO8O15397 1037 aaKnown RBP15.87■□□□□ 0.13
NR1H3-217ENST00000467728 TMPOP42166 694 aaKnown RBP15.86■□□□□ 0.13
NR1H3-217ENST00000467728 SIRT2Q8IXJ6 389 aa15.86■□□□□ 0.13
NR1H3-217ENST00000467728 ZNF518AQ6AHZ1 1483 aa15.85■□□□□ 0.13
NR1H3-217ENST00000467728 ADGRF5Q8IZF2 1346 aa15.85■□□□□ 0.13
NR1H3-217ENST00000467728 ZBTB7BO15156 539 aaPredicted RBP15.85■□□□□ 0.13
NR1H3-217ENST00000467728 GCC1Q96CN9 775 aa15.85■□□□□ 0.13
NR1H3-217ENST00000467728 NOS1P29475 1434 aa15.85■□□□□ 0.13
NR1H3-217ENST00000467728 NOLC1Q14978 699 aaKnown RBP eCLIP15.85■□□□□ 0.13
NR1H3-217ENST00000467728 USP26Q9BXU7 913 aa15.85■□□□□ 0.13
NR1H3-217ENST00000467728 GTPBP4Q9BZE4 634 aaKnown RBP15.85■□□□□ 0.13
NR1H3-217ENST00000467728 TTC12Q9H892 705 aaPredicted RBP15.85■□□□□ 0.13
NR1H3-217ENST00000467728 CFAP74Q9C0B2 1584 aa15.84■□□□□ 0.13
NR1H3-217ENST00000467728 FOXD4L6Q3SYB3 417 aaPredicted RBP15.84■□□□□ 0.13
NR1H3-217ENST00000467728 FOXD4L3Q6VB84 417 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms