RNA–Protein interactions for RNA: ENST00000467411.5

CDCA7-206, Transcript of cell division cycle associated 7, humanhuman

TSL 1 (best)

Gene CDCA7, Length 3,176 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-206ENST00000467411 ADGRL3Q9HAR2 1447 aa13.64□□□□□ -0.23
CDCA7-206ENST00000467411 SUPT16HQ9Y5B9 1047 aaKnown RBP13.64□□□□□ -0.23
CDCA7-206ENST00000467411 ERICH6BQ5W0A0 696 aa13.64□□□□□ -0.23
CDCA7-206ENST00000467411 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
CDCA7-206ENST00000467411 USP31Q70CQ4 1352 aa13.63□□□□□ -0.23
CDCA7-206ENST00000467411 STRCQ7RTU9 1775 aa13.63□□□□□ -0.23
CDCA7-206ENST00000467411 CNGB1Q14028 1251 aaPredicted RBP13.63□□□□□ -0.23
CDCA7-206ENST00000467411 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
CDCA7-206ENST00000467411 SENP3Q9H4L4 574 aaPredicted RBP13.62□□□□□ -0.23
CDCA7-206ENST00000467411 PHRF1Q9P1Y6 1649 aaKnown RBP13.62□□□□□ -0.23
CDCA7-206ENST00000467411 WDR43Q15061 677 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDCA7-206ENST00000467411 TRMT2AQ8IZ69 625 aaKnown RBP13.62□□□□□ -0.23
CDCA7-206ENST00000467411 KIF1AQ12756 1690 aa13.61□□□□□ -0.23
CDCA7-206ENST00000467411 KCNA6P17658 529 aa13.61□□□□□ -0.23
CDCA7-206ENST00000467411 BCANQ96GW7 911 aa13.61□□□□□ -0.23
CDCA7-206ENST00000467411 PEAK1Q9H792 1746 aa13.61□□□□□ -0.23
CDCA7-206ENST00000467411 MST1RQ04912 1400 aa13.6□□□□□ -0.23
CDCA7-206ENST00000467411 MTHFSP49914 203 aa13.6□□□□□ -0.23
CDCA7-206ENST00000467411 XIRP1Q702N8 1843 aaKnown RBP13.6□□□□□ -0.23
CDCA7-206ENST00000467411 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
CDCA7-206ENST00000467411 LMTK3Q96Q04 1460 aa13.59□□□□□ -0.23
CDCA7-206ENST00000467411 TTC21AQ8NDW8 1320 aa13.59□□□□□ -0.23
CDCA7-206ENST00000467411 CCDC27Q2M243 656 aa13.58□□□□□ -0.24
CDCA7-206ENST00000467411 GGNBP2Q9H3C7 697 aa13.58□□□□□ -0.24
CDCA7-206ENST00000467411 ACEP12821 1306 aa13.58□□□□□ -0.24
CDCA7-206ENST00000467411 CFAP53Q96M91 514 aa13.58□□□□□ -0.24
CDCA7-206ENST00000467411 TTC21BQ7Z4L5 1316 aa13.57□□□□□ -0.24
CDCA7-206ENST00000467411 NCKAP5LQ9HCH0 1330 aa13.57□□□□□ -0.24
CDCA7-206ENST00000467411 DCCP43146 1447 aa13.57□□□□□ -0.24
CDCA7-206ENST00000467411 PLEKHF1Q96S99 279 aa13.57□□□□□ -0.24
CDCA7-206ENST00000467411 POLKQ9UBT6 870 aa13.56□□□□□ -0.24
CDCA7-206ENST00000467411 RUNDC1Q96C34 613 aa13.55□□□□□ -0.24
CDCA7-206ENST00000467411 PLPPR3Q6T4P5 718 aa13.53□□□□□ -0.24
CDCA7-206ENST00000467411 NME9Q86XW9 330 aa13.53□□□□□ -0.24
CDCA7-206ENST00000467411 KIF24Q5T7B8 1368 aa13.53□□□□□ -0.24
CDCA7-206ENST00000467411 ALS2Q96Q42 1657 aa13.53□□□□□ -0.24
CDCA7-206ENST00000467411 KDM4FA0A1W2PPD8 638 aa13.53□□□□□ -0.24
CDCA7-206ENST00000467411 SLFN5Q08AF3 891 aa13.53□□□□□ -0.24
CDCA7-206ENST00000467411 DUSP27Q5VZP5 1158 aa13.52□□□□□ -0.24
CDCA7-206ENST00000467411 SLIT3O75094 1523 aa13.52□□□□□ -0.25
CDCA7-206ENST00000467411 NFAT5O94916 1531 aa13.52□□□□□ -0.25
CDCA7-206ENST00000467411 FKBP8Q14318 412 aa13.51□□□□□ -0.25
CDCA7-206ENST00000467411 COG3Q96JB2 828 aa13.51□□□□□ -0.25
CDCA7-206ENST00000467411 CRYBG1Q9Y4K1 1723 aa13.5□□□□□ -0.25
CDCA7-206ENST00000467411 IL13P35225 146 aa13.5□□□□□ -0.25
CDCA7-206ENST00000467411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.5□□□□□ -0.25
CDCA7-206ENST00000467411 LTN1O94822 1766 aa13.5□□□□□ -0.25
CDCA7-206ENST00000467411 DLG5Q8TDM6 1919 aa13.5□□□□□ -0.25
CDCA7-206ENST00000467411 GOLGA2Q08379 1002 aa13.49□□□□□ -0.25
CDCA7-206ENST00000467411 WDR63Q8IWG1 891 aa13.49□□□□□ -0.25
CDCA7-206ENST00000467411 CDCA7LQ96GN5 454 aa13.49□□□□□ -0.25
CDCA7-206ENST00000467411 CAMTA1Q9Y6Y1 1673 aa13.49□□□□□ -0.25
CDCA7-206ENST00000467411 APAF1O14727 1248 aa13.49□□□□□ -0.25
CDCA7-206ENST00000467411 TNNT2P45379 298 aaPredicted RBP13.49□□□□□ -0.25
CDCA7-206ENST00000467411 DIAPH1O60610 1272 aaKnown RBP13.48□□□□□ -0.25
CDCA7-206ENST00000467411 NEFLP07196 543 aa13.48□□□□□ -0.25
CDCA7-206ENST00000467411 WWC1Q8IX03 1113 aa13.48□□□□□ -0.25
CDCA7-206ENST00000467411 FCHSD2O94868 740 aa13.48□□□□□ -0.25
CDCA7-206ENST00000467411 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
CDCA7-206ENST00000467411 E9PSI1 815 aa13.47□□□□□ -0.25
CDCA7-206ENST00000467411 CCDC146Q8IYE0 955 aa13.47□□□□□ -0.25
CDCA7-206ENST00000467411 PNNQ9H307 717 aaKnown RBP13.47□□□□□ -0.25
CDCA7-206ENST00000467411 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
CDCA7-206ENST00000467411 C1orf167Q5SNV9 1468 aa13.47□□□□□ -0.25
CDCA7-206ENST00000467411 TCP11L2Q8N4U5 519 aa13.46□□□□□ -0.25
CDCA7-206ENST00000467411 SBNO1A3KN83 1393 aa13.46□□□□□ -0.26
CDCA7-206ENST00000467411 RTL1A6NKG5 1358 aa13.46□□□□□ -0.26
CDCA7-206ENST00000467411 RCAN3Q9UKA8 241 aa13.46□□□□□ -0.26
CDCA7-206ENST00000467411 IL16Q14005 1332 aa13.46□□□□□ -0.26
CDCA7-206ENST00000467411 RRP1P56182 461 aaKnown RBP13.44□□□□□ -0.26
CDCA7-206ENST00000467411 ABCC6O95255 1503 aa13.44□□□□□ -0.26
CDCA7-206ENST00000467411 MED1Q15648 1581 aaPredicted RBP13.44□□□□□ -0.26
CDCA7-206ENST00000467411 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
CDCA7-206ENST00000467411 EMILIN1Q9Y6C2 1016 aa13.44□□□□□ -0.26
CDCA7-206ENST00000467411 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
CDCA7-206ENST00000467411 ARHGEF10O15013 1369 aa13.44□□□□□ -0.26
CDCA7-206ENST00000467411 LRRC37A3O60309 1634 aa13.43□□□□□ -0.26
CDCA7-206ENST00000467411 LMO7Q8WWI1 1683 aa13.43□□□□□ -0.26
CDCA7-206ENST00000467411 U2AF1L5P0DN76 240 aaPredicted RBP13.43□□□□□ -0.26
CDCA7-206ENST00000467411 U2AF1Q01081 240 aaKnown RBP eCLIP13.43□□□□□ -0.266e-10■□□□□ 8.8
CDCA7-206ENST00000467411 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
CDCA7-206ENST00000467411 KDRP35968 1356 aa13.42□□□□□ -0.26
CDCA7-206ENST00000467411 NCAPD2Q15021 1401 aa13.42□□□□□ -0.26
CDCA7-206ENST00000467411 TRIM35Q9UPQ4 493 aa13.42□□□□□ -0.26
CDCA7-206ENST00000467411 FLT4P35916 1363 aa13.42□□□□□ -0.26
CDCA7-206ENST00000467411 PMFBP1Q8TBY8 1022 aa13.42□□□□□ -0.26
CDCA7-206ENST00000467411 C19orf44Q9H6X5 657 aa13.42□□□□□ -0.26
CDCA7-206ENST00000467411 PPP4R2Q9NY27 417 aa13.42□□□□□ -0.26
CDCA7-206ENST00000467411 TMPOP42166 694 aaKnown RBP13.41□□□□□ -0.26
CDCA7-206ENST00000467411 NGDNQ8NEJ9 315 aaKnown RBP13.41□□□□□ -0.26
CDCA7-206ENST00000467411 USP19O94966 1318 aa13.4□□□□□ -0.26
CDCA7-206ENST00000467411 TMEM94Q12767 1356 aa13.4□□□□□ -0.26
CDCA7-206ENST00000467411 FBLN1P23142 703 aa13.4□□□□□ -0.26
CDCA7-206ENST00000467411 PXDNQ92626 1479 aa13.4□□□□□ -0.27
CDCA7-206ENST00000467411 COL18A1P39060 1754 aa13.39□□□□□ -0.27
CDCA7-206ENST00000467411 EIF4A2Q14240 407 aaKnown RBP13.39□□□□□ -0.27
CDCA7-206ENST00000467411 MAP3K19Q56UN5 1328 aa13.39□□□□□ -0.27
CDCA7-206ENST00000467411 CT47B1P0C2W7 299 aaPredicted RBP13.38□□□□□ -0.27
CDCA7-206ENST00000467411 SALL2Q9Y467 1007 aaPredicted RBP13.38□□□□□ -0.27
CDCA7-206ENST00000467411 NUTM2FA1L443 756 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms