RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 KDM4CQ9H3R0 1056 aa11.58□□□□□ -0.56
ATG3-204ENST00000467275 LILRB3O75022 631 aa11.57□□□□□ -0.56
ATG3-204ENST00000467275 ALDH1A1P00352 501 aa11.57□□□□□ -0.56
ATG3-204ENST00000467275 POTECB2RU33 542 aa11.55□□□□□ -0.56
ATG3-204ENST00000467275 SMCPP49901 116 aaPredicted RBP11.55□□□□□ -0.56
ATG3-204ENST00000467275 ZNF511Q8NB15 262 aa11.55□□□□□ -0.56
ATG3-204ENST00000467275 MAP10Q9P2G4 905 aa11.55□□□□□ -0.56
ATG3-204ENST00000467275 HELBQ8NG08 1087 aaPredicted RBP11.54□□□□□ -0.56
ATG3-204ENST00000467275 DDRGK1Q96HY6 314 aa11.54□□□□□ -0.56
ATG3-204ENST00000467275 DACH1Q9UI36 760 aa11.54□□□□□ -0.56
ATG3-204ENST00000467275 ATP1B4Q9UN42 357 aaPredicted RBP11.54□□□□□ -0.56
ATG3-204ENST00000467275 PER1O15534 1290 aaPredicted RBP11.53□□□□□ -0.56
ATG3-204ENST00000467275 SIAH2O43255 324 aa11.53□□□□□ -0.56
ATG3-204ENST00000467275 RTL5Q5HYW3 569 aaPredicted RBP11.53□□□□□ -0.56
ATG3-204ENST00000467275 HPS1Q92902 700 aa11.53□□□□□ -0.56
ATG3-204ENST00000467275 F12P00748 615 aaPredicted RBP11.52□□□□□ -0.57
ATG3-204ENST00000467275 FAM117AQ9C073 453 aa11.52□□□□□ -0.57
ATG3-204ENST00000467275 WASF2Q9Y6W5 498 aa11.52□□□□□ -0.57
ATG3-204ENST00000467275 VARSP26640 1264 aaKnown RBP11.5□□□□□ -0.57
ATG3-204ENST00000467275 SKIV2LQ15477 1246 aaKnown RBP11.5□□□□□ -0.57
ATG3-204ENST00000467275 SH3D19Q5HYK7 790 aa11.48□□□□□ -0.57
ATG3-204ENST00000467275 GMPR2Q9P2T1 348 aaKnown RBP11.48□□□□□ -0.57
ATG3-204ENST00000467275 PLEKHG3A1L390 1219 aa11.47□□□□□ -0.57
ATG3-204ENST00000467275 ZNF775Q96BV0 537 aaPredicted RBP11.47□□□□□ -0.57
ATG3-204ENST00000467275 TLL2Q9Y6L7 1015 aa11.47□□□□□ -0.57
ATG3-204ENST00000467275 AGERQ15109 404 aa11.46□□□□□ -0.57
ATG3-204ENST00000467275 C11orf95C9JLR9 678 aaPredicted RBP11.45□□□□□ -0.58
ATG3-204ENST00000467275 PROCA1Q8NCQ7 364 aaPredicted RBP11.45□□□□□ -0.58
ATG3-204ENST00000467275 ARMC2Q8NEN0 867 aa11.45□□□□□ -0.58
ATG3-204ENST00000467275 FAM174AQ8TBP5 190 aa11.45□□□□□ -0.58
ATG3-204ENST00000467275 FOXJ1Q92949 421 aa11.45□□□□□ -0.58
ATG3-204ENST00000467275 ATP13A2Q9NQ11 1180 aa11.45□□□□□ -0.58
ATG3-204ENST00000467275 CTDSPL2Q05D32 466 aa11.43□□□□□ -0.58
ATG3-204ENST00000467275 BPHLQ86WA6 291 aaPredicted RBP11.42□□□□□ -0.58
ATG3-204ENST00000467275 MPNDQ8N594 471 aa11.42□□□□□ -0.58
ATG3-204ENST00000467275 ARID5BQ14865 1188 aa11.41□□□□□ -0.58
ATG3-204ENST00000467275 NBPF14Q5TI25 921 aa11.41□□□□□ -0.58
ATG3-204ENST00000467275 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.41□□□□□ -0.58
ATG3-204ENST00000467275 CAPN5O15484 640 aaPredicted RBP11.4□□□□□ -0.58
ATG3-204ENST00000467275 NEUROD2Q15784 382 aa11.4□□□□□ -0.58
ATG3-204ENST00000467275 NNTQ13423 1086 aa11.39□□□□□ -0.59
ATG3-204ENST00000467275 SENP2Q9HC62 589 aa11.39□□□□□ -0.59
ATG3-204ENST00000467275 PPP2R2DQ66LE6 453 aa11.38□□□□□ -0.59
ATG3-204ENST00000467275 C4orf48Q5BLP8 95 aa11.37□□□□□ -0.59
ATG3-204ENST00000467275 FBXO31Q5XUX0 539 aaPredicted RBP11.37□□□□□ -0.59
ATG3-204ENST00000467275 LRRN4Q8WUT4 740 aa11.37□□□□□ -0.59
ATG3-204ENST00000467275 AP1G2O75843 785 aa11.36□□□□□ -0.59
ATG3-204ENST00000467275 ADH1CP00326 375 aa11.36□□□□□ -0.59
ATG3-204ENST00000467275 CDK15Q96Q40 435 aa11.36□□□□□ -0.59
ATG3-204ENST00000467275 MAGEB6P1A0A0J9YX57 407 aa11.35□□□□□ -0.59
ATG3-204ENST00000467275 GPKOWQ92917 476 aaPredicted RBP eCLIP11.35□□□□□ -0.59
ATG3-204ENST00000467275 KIFC2Q96AC6 838 aa11.35□□□□□ -0.59
ATG3-204ENST00000467275 TRIM47Q96LD4 638 aa11.35□□□□□ -0.59
ATG3-204ENST00000467275 BMP1P13497 986 aa11.34□□□□□ -0.59
ATG3-204ENST00000467275 SNRPBP14678 240 aaKnown RBP11.34□□□□□ -0.59
ATG3-204ENST00000467275 WDR4P57081 412 aaKnown RBP11.33□□□□□ -0.6
ATG3-204ENST00000467275 SH3BP5LQ7L8J4 393 aa11.33□□□□□ -0.6
ATG3-204ENST00000467275 SH3RF1Q7Z6J0 888 aa11.33□□□□□ -0.6
ATG3-204ENST00000467275 IL27Q8NEV9 243 aa11.33□□□□□ -0.6
ATG3-204ENST00000467275 PCMTD1Q96MG8 357 aaPredicted RBP11.33□□□□□ -0.6
ATG3-204ENST00000467275 NR6A1Q15406 480 aa11.32□□□□□ -0.6
ATG3-204ENST00000467275 CARD14Q9BXL6 1004 aa11.32□□□□□ -0.6
ATG3-204ENST00000467275 NR5A1Q13285 461 aa11.31□□□□□ -0.6
ATG3-204ENST00000467275 TRIM46Q7Z4K8 759 aa11.31□□□□□ -0.6
ATG3-204ENST00000467275 FKBPLQ9UIM3 349 aa11.31□□□□□ -0.6
ATG3-204ENST00000467275 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
ATG3-204ENST00000467275 C1QTNF2Q9BXJ5 285 aa11.3□□□□□ -0.6
ATG3-204ENST00000467275 GOPCQ9HD26 462 aa11.3□□□□□ -0.6
ATG3-204ENST00000467275 TIMP2P16035 220 aa11.29□□□□□ -0.6
ATG3-204ENST00000467275 RFC5P40937 340 aa11.29□□□□□ -0.6
ATG3-204ENST00000467275 PDXDC2PQ6P474 469 aa11.29□□□□□ -0.6
ATG3-204ENST00000467275 GRM5P41594 1212 aa11.28□□□□□ -0.6
ATG3-204ENST00000467275 BRPF1P55201 1214 aaPredicted RBP11.28□□□□□ -0.6
ATG3-204ENST00000467275 VASH1Q7L8A9 365 aaPredicted RBP11.28□□□□□ -0.6
ATG3-204ENST00000467275 ARHGAP9Q9BRR9 750 aa11.28□□□□□ -0.6
ATG3-204ENST00000467275 ZIC2O95409 532 aaPredicted RBP11.27□□□□□ -0.61
ATG3-204ENST00000467275 NR3C2P08235 984 aa11.27□□□□□ -0.61
ATG3-204ENST00000467275 USP17L8P0C7I0 530 aa11.27□□□□□ -0.61
ATG3-204ENST00000467275 TREML4Q6UXN2 200 aa11.27□□□□□ -0.61
ATG3-204ENST00000467275 TRMT44Q8IYL2 757 aaKnown RBP11.27□□□□□ -0.61
ATG3-204ENST00000467275 FSHRP23945 695 aa11.26□□□□□ -0.61
ATG3-204ENST00000467275 ERFEQ4G0M1 354 aa11.26□□□□□ -0.61
ATG3-204ENST00000467275 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
ATG3-204ENST00000467275 KLF16Q9BXK1 252 aaPredicted RBP11.26□□□□□ -0.61
ATG3-204ENST00000467275 MAP4K5Q9Y4K4 846 aa11.26□□□□□ -0.61
ATG3-204ENST00000467275 ZC3H4Q9UPT8 1303 aaKnown RBP11.26□□□□□ -0.61
ATG3-204ENST00000467275 SCARF1Q14162 830 aa11.25□□□□□ -0.61
ATG3-204ENST00000467275 MRPL14Q6P1L8 145 aaKnown RBP11.25□□□□□ -0.61
ATG3-204ENST00000467275 ZBTB33Q86T24 672 aa11.25□□□□□ -0.61
ATG3-204ENST00000467275 ZFP42Q96MM3 310 aa11.25□□□□□ -0.61
ATG3-204ENST00000467275 PTK2Q05397 1052 aa11.24□□□□□ -0.61
ATG3-204ENST00000467275 ITPKCQ96DU7 683 aa11.24□□□□□ -0.61
ATG3-204ENST00000467275 ZFAND3Q9H8U3 227 aa11.24□□□□□ -0.61
ATG3-204ENST00000467275 HMX1Q9NP08 348 aaPredicted RBP11.24□□□□□ -0.61
ATG3-204ENST00000467275 WFS1O76024 890 aa11.23□□□□□ -0.61
ATG3-204ENST00000467275 TMEM259Q4ZIN3 620 aa11.23□□□□□ -0.61
ATG3-204ENST00000467275 EPS8L1Q8TE68 723 aa11.23□□□□□ -0.61
ATG3-204ENST00000467275 SLC10A4Q96EP9 437 aa11.22□□□□□ -0.61
ATG3-204ENST00000467275 PURBQ96QR8 312 aaKnown RBP11.22□□□□□ -0.61
ATG3-204ENST00000467275 CCDC116Q8IYX3 515 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms