RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 E9PCH4 1651 aa10.86□□□□□ -0.67
SND1-205ENST00000467238 IQGAP3Q86VI3 1631 aa10.85□□□□□ -0.67
SND1-205ENST00000467238 PIP4K2BP78356 416 aa10.85□□□□□ -0.67
SND1-205ENST00000467238 ILDR2Q71H61 639 aa10.85□□□□□ -0.67
SND1-205ENST00000467238 EID1Q9Y6B2 187 aa10.85□□□□□ -0.67
SND1-205ENST00000467238 ROCK1Q13464 1354 aa10.85□□□□□ -0.67
SND1-205ENST00000467238 PSDA5PKW4 1024 aaPredicted RBP10.84□□□□□ -0.67
SND1-205ENST00000467238 IRX2Q9BZI1 471 aaPredicted RBP10.84□□□□□ -0.67
SND1-205ENST00000467238 SLC52A1Q9NWF4 448 aa10.84□□□□□ -0.67
SND1-205ENST00000467238 CHD2O14647 1828 aaKnown RBP10.84□□□□□ -0.67
SND1-205ENST00000467238 TMEM131LA2VDJ0 1609 aa10.84□□□□□ -0.67
SND1-205ENST00000467238 HSPA1LP34931 641 aa10.83□□□□□ -0.68
SND1-205ENST00000467238 RGS20O76081 388 aa10.82□□□□□ -0.68
SND1-205ENST00000467238 TAOK2Q9UL54 1235 aa10.81□□□□□ -0.68
SND1-205ENST00000467238 ZFYVE9O95405 1425 aa10.81□□□□□ -0.68
SND1-205ENST00000467238 NWD1Q149M9 1564 aa10.81□□□□□ -0.68
SND1-205ENST00000467238 MED1Q15648 1581 aaPredicted RBP10.81□□□□□ -0.68
SND1-205ENST00000467238 IFFO2Q5TF58 517 aa10.8□□□□□ -0.68
SND1-205ENST00000467238 TMC2Q8TDI7 906 aa10.8□□□□□ -0.68
SND1-205ENST00000467238 SPHKAPQ2M3C7 1700 aa10.79□□□□□ -0.68
SND1-205ENST00000467238 PTPN5P54829 565 aa10.79□□□□□ -0.68
SND1-205ENST00000467238 STK24Q9Y6E0 443 aa10.79□□□□□ -0.68
SND1-205ENST00000467238 PPARGC1BQ86YN6 1023 aaKnown RBP10.78□□□□□ -0.68
SND1-205ENST00000467238 PTCD2Q8WV60 388 aaKnown RBP10.78□□□□□ -0.68
SND1-205ENST00000467238 NKTRP30414 1462 aaKnown RBP10.78□□□□□ -0.68
SND1-205ENST00000467238 RIMS2Q9UQ26 1411 aa10.77□□□□□ -0.68
SND1-205ENST00000467238 SOCS7O14512 581 aa10.77□□□□□ -0.69
SND1-205ENST00000467238 KCNA6P17658 529 aa10.77□□□□□ -0.69
SND1-205ENST00000467238 SLC26A8Q96RN1 970 aa10.77□□□□□ -0.69
SND1-205ENST00000467238 NUP155O75694 1391 aa10.77□□□□□ -0.69
SND1-205ENST00000467238 TMEM94Q12767 1356 aa10.77□□□□□ -0.69
SND1-205ENST00000467238 PLEKHG1Q9ULL1 1385 aa10.77□□□□□ -0.69
SND1-205ENST00000467238 RRBP1Q9P2E9 1410 aaKnown RBP10.76□□□□□ -0.69
SND1-205ENST00000467238 ECM2O94769 699 aaPredicted RBP10.76□□□□□ -0.69
SND1-205ENST00000467238 ITGAEP38570 1179 aa10.76□□□□□ -0.69
SND1-205ENST00000467238 A0A0G2JS52 829 aa10.75□□□□□ -0.69
SND1-205ENST00000467238 ROBO1Q9Y6N7 1651 aa10.75□□□□□ -0.69
SND1-205ENST00000467238 KIF1BO60333 1816 aa10.74□□□□□ -0.69
SND1-205ENST00000467238 DIP2AQ14689 1571 aa10.74□□□□□ -0.69
SND1-205ENST00000467238 VPS9D1Q9Y2B5 631 aa10.74□□□□□ -0.69
SND1-205ENST00000467238 PPP1R15AO75807 674 aaPredicted RBP10.73□□□□□ -0.69
SND1-205ENST00000467238 HDGFP51858 240 aaKnown RBP10.73□□□□□ -0.69
SND1-205ENST00000467238 PROSER2Q86WR7 435 aaPredicted RBP10.73□□□□□ -0.69
SND1-205ENST00000467238 BCANQ96GW7 911 aa10.73□□□□□ -0.69
SND1-205ENST00000467238 KCNK17Q96T54 332 aa10.73□□□□□ -0.69
SND1-205ENST00000467238 FAM135BQ49AJ0 1406 aa10.73□□□□□ -0.69
SND1-205ENST00000467238 ADAMTS13Q76LX8 1427 aa10.73□□□□□ -0.69
SND1-205ENST00000467238 CHGAP10645 457 aaKnown RBP10.72□□□□□ -0.69
SND1-205ENST00000467238 PPP4R3BQ5MIZ7 849 aa10.72□□□□□ -0.69
SND1-205ENST00000467238 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.72□□□□□ -0.69
SND1-205ENST00000467238 STAC3Q96MF2 364 aa10.72□□□□□ -0.69
SND1-205ENST00000467238 NRXN3Q9Y4C0 1643 aa10.72□□□□□ -0.69
SND1-205ENST00000467238 RGL2O15211 777 aa10.71□□□□□ -0.69
SND1-205ENST00000467238 PPP1R37O75864 691 aa10.71□□□□□ -0.69
SND1-205ENST00000467238 NAIPQ13075 1403 aa10.71□□□□□ -0.69
SND1-205ENST00000467238 RBM33Q96EV2 1170 aaKnown RBP10.71□□□□□ -0.69
SND1-205ENST00000467238 TBX22Q9Y458 520 aa10.71□□□□□ -0.69
SND1-205ENST00000467238 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.7□□□□□ -0.7
SND1-205ENST00000467238 CLTCL1P53675 1640 aa10.7□□□□□ -0.7
SND1-205ENST00000467238 MSH6P52701 1360 aa10.7□□□□□ -0.7
SND1-205ENST00000467238 TRPM2O94759 1503 aa10.69□□□□□ -0.7
SND1-205ENST00000467238 PIK3R4Q99570 1358 aa10.69□□□□□ -0.7
SND1-205ENST00000467238 NUTM2DQ5VT03 806 aaPredicted RBP10.69□□□□□ -0.7
SND1-205ENST00000467238 PHLPP1O60346 1717 aa10.69□□□□□ -0.7
SND1-205ENST00000467238 XRN1Q8IZH2 1706 aaKnown RBP10.69□□□□□ -0.7
SND1-205ENST00000467238 SETBP1Q9Y6X0 1596 aa10.69□□□□□ -0.7
SND1-205ENST00000467238 NCOA3Q9Y6Q9 1424 aa10.68□□□□□ -0.7
SND1-205ENST00000467238 STK25O00506 426 aa10.68□□□□□ -0.7
SND1-205ENST00000467238 THSD4Q6ZMP0 1018 aa10.68□□□□□ -0.7
SND1-205ENST00000467238 NEXMIFQ5QGS0 1516 aa10.67□□□□□ -0.7
SND1-205ENST00000467238 HFM1A2PYH4 1435 aa10.67□□□□□ -0.7
SND1-205ENST00000467238 PTPRUQ92729 1446 aa10.66□□□□□ -0.7
SND1-205ENST00000467238 SETD1AO15047 1707 aaKnown RBP10.65□□□□□ -0.7
SND1-205ENST00000467238 BHMG1C9JSJ3 638 aaPredicted RBP10.65□□□□□ -0.7
SND1-205ENST00000467238 SLAIN2Q9P270 581 aa10.65□□□□□ -0.7
SND1-205ENST00000467238 COL16A1Q07092 1604 aaPredicted RBP10.65□□□□□ -0.7
SND1-205ENST00000467238 PPLO60437 1756 aa10.65□□□□□ -0.71
SND1-205ENST00000467238 PLPP6Q8IY26 295 aa10.64□□□□□ -0.71
SND1-205ENST00000467238 FOXK1P85037 733 aa10.63□□□□□ -0.71
SND1-205ENST00000467238 ZNF326Q5BKZ1 582 aaKnown RBP10.63□□□□□ -0.71
SND1-205ENST00000467238 AMOTL2Q9Y2J4 779 aa10.63□□□□□ -0.71
SND1-205ENST00000467238 AHDC1Q5TGY3 1603 aaPredicted RBP10.62□□□□□ -0.71
SND1-205ENST00000467238 C14orf37Q86TY3 774 aa10.62□□□□□ -0.71
SND1-205ENST00000467238 C19orf44Q9H6X5 657 aa10.62□□□□□ -0.71
SND1-205ENST00000467238 RGS17Q9UGC6 210 aaPredicted RBP10.62□□□□□ -0.71
SND1-205ENST00000467238 NALCNQ8IZF0 1738 aa10.61□□□□□ -0.71
SND1-205ENST00000467238 DCCP43146 1447 aa10.61□□□□□ -0.71
SND1-205ENST00000467238 SHPRHQ149N8 1683 aa10.61□□□□□ -0.71
SND1-205ENST00000467238 CADPS2Q86UW7 1296 aa10.61□□□□□ -0.71
SND1-205ENST00000467238 SLC4A5Q9BY07 1137 aa10.61□□□□□ -0.71
SND1-205ENST00000467238 METP08581 1390 aa10.61□□□□□ -0.71
SND1-205ENST00000467238 NHSL1Q5SYE7 1610 aa10.6□□□□□ -0.71
SND1-205ENST00000467238 TRIM52Q96A61 297 aa10.6□□□□□ -0.71
SND1-205ENST00000467238 JCADQ9P266 1359 aa10.6□□□□□ -0.71
SND1-205ENST00000467238 IFT172Q9UG01 1749 aa10.59□□□□□ -0.71
SND1-205ENST00000467238 ATF3P18847 181 aa10.59□□□□□ -0.71
SND1-205ENST00000467238 DSG2Q14126 1118 aa10.59□□□□□ -0.71
SND1-205ENST00000467238 WNT2BQ93097 391 aa10.58□□□□□ -0.72
SND1-205ENST00000467238 ADGRL3Q9HAR2 1447 aa10.58□□□□□ -0.72
SND1-205ENST00000467238 Q6ZNB5 142 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms