RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 DDX19BQ9UMR2 479 aa18.89■□□□□ 0.61
RRP1-201ENST00000467112 RRAGDQ9NQL2 400 aaPredicted RBP18.88■□□□□ 0.61
RRP1-201ENST00000467112 RPGRIP1LQ68CZ1 1315 aa18.88■□□□□ 0.61
RRP1-201ENST00000467112 TMEM57Q8N5G2 664 aa18.87■□□□□ 0.61
RRP1-201ENST00000467112 CHMP5Q9NZZ3 219 aa18.87■□□□□ 0.61
RRP1-201ENST00000467112 XRCC6P12956 609 aaKnown RBP eCLIP18.86■□□□□ 0.611e-19■■■□□ 14.9
RRP1-201ENST00000467112 A0A1W2PP64 1363 aa18.86■□□□□ 0.61
RRP1-201ENST00000467112 PUS7Q96PZ0 661 aaKnown RBP18.86■□□□□ 0.61
RRP1-201ENST00000467112 SMC5Q8IY18 1101 aa18.85■□□□□ 0.61
RRP1-201ENST00000467112 GOLGA6L3A6NEY3 463 aa18.85■□□□□ 0.61
RRP1-201ENST00000467112 STK26Q9P289 416 aa18.85■□□□□ 0.61
RRP1-201ENST00000467112 SRPK2P78362 688 aaKnown RBP18.84■□□□□ 0.61
RRP1-201ENST00000467112 RIPK4P57078 832 aa18.84■□□□□ 0.61
RRP1-201ENST00000467112 ZBTB40Q9NUA8 1239 aa18.84■□□□□ 0.61
RRP1-201ENST00000467112 VGFO15240 615 aaPredicted RBP18.83■□□□□ 0.61
RRP1-201ENST00000467112 PANK2Q9BZ23 570 aa18.83■□□□□ 0.61
RRP1-201ENST00000467112 RSPH6AQ9H0K4 717 aa18.83■□□□□ 0.6
RRP1-201ENST00000467112 ABCC11Q96J66 1382 aa18.83■□□□□ 0.6
RRP1-201ENST00000467112 FSD2A1L4K1 749 aa18.82■□□□□ 0.6
RRP1-201ENST00000467112 TRAK2O60296 914 aa18.82■□□□□ 0.6
RRP1-201ENST00000467112 NPM1P06748 294 aaKnown RBP eCLIP18.82■□□□□ 0.6
RRP1-201ENST00000467112 ARHGEF28Q8N1W1 1705 aaKnown RBP18.82■□□□□ 0.6
RRP1-201ENST00000467112 HSCBQ8IWL3 235 aa18.82■□□□□ 0.6
RRP1-201ENST00000467112 LNPKQ9C0E8 428 aa18.82■□□□□ 0.6
RRP1-201ENST00000467112 FRMPD1Q5SYB0 1578 aa18.81■□□□□ 0.6
RRP1-201ENST00000467112 FYB1O15117 783 aa18.81■□□□□ 0.6
RRP1-201ENST00000467112 COL3A1P02461 1466 aaPredicted RBP18.8■□□□□ 0.6
RRP1-201ENST00000467112 ZNF692Q9BU19 519 aaPredicted RBP18.79■□□□□ 0.6
RRP1-201ENST00000467112 IL16Q14005 1332 aa18.79■□□□□ 0.6
RRP1-201ENST00000467112 NUCB1Q02818 461 aa18.78■□□□□ 0.6
RRP1-201ENST00000467112 KIF16BQ96L93 1317 aa18.78■□□□□ 0.6
RRP1-201ENST00000467112 CAMSAP1Q5T5Y3 1602 aa18.78■□□□□ 0.6
RRP1-201ENST00000467112 ABCC3O15438 1527 aa18.78■□□□□ 0.6
RRP1-201ENST00000467112 MINK1Q8N4C8 1332 aaPredicted RBP18.77■□□□□ 0.6
RRP1-201ENST00000467112 IPO8O15397 1037 aaKnown RBP18.77■□□□□ 0.6
RRP1-201ENST00000467112 DIP2BQ9P265 1576 aa18.77■□□□□ 0.6
RRP1-201ENST00000467112 DIAPH1O60610 1272 aaKnown RBP18.77■□□□□ 0.6
RRP1-201ENST00000467112 NEXMIFQ5QGS0 1516 aa18.76■□□□□ 0.59
RRP1-201ENST00000467112 HECW2Q9P2P5 1572 aa18.76■□□□□ 0.59
RRP1-201ENST00000467112 RBM25P49756 843 aaKnown RBP18.76■□□□□ 0.59
RRP1-201ENST00000467112 IDI1Q13907 227 aa18.76■□□□□ 0.59
RRP1-201ENST00000467112 CHD1LQ86WJ1 897 aa18.76■□□□□ 0.59
RRP1-201ENST00000467112 POGZQ7Z3K3 1410 aa18.75■□□□□ 0.59
RRP1-201ENST00000467112 SIGLEC1Q9BZZ2 1709 aa18.75■□□□□ 0.59
RRP1-201ENST00000467112 TERF2IPQ9NYB0 399 aa18.75■□□□□ 0.59
RRP1-201ENST00000467112 NEO1Q92859 1461 aa18.74■□□□□ 0.59
RRP1-201ENST00000467112 FBLN1P23142 703 aa18.74■□□□□ 0.59
RRP1-201ENST00000467112 DDIT3P35638 169 aa18.73■□□□□ 0.59
RRP1-201ENST00000467112 PRAM1Q96QH2 718 aa18.73■□□□□ 0.59
RRP1-201ENST00000467112 MLH3Q9UHC1 1453 aa18.73■□□□□ 0.59
RRP1-201ENST00000467112 DDX11L8A8MPP1 907 aa18.73■□□□□ 0.59
RRP1-201ENST00000467112 C1orf115Q9H7X2 142 aa18.73■□□□□ 0.59
RRP1-201ENST00000467112 NCOA3Q9Y6Q9 1424 aa18.72■□□□□ 0.59
RRP1-201ENST00000467112 ALDH1L2Q3SY69 923 aa18.72■□□□□ 0.59
RRP1-201ENST00000467112 ANKRD45Q5TZF3 282 aa18.72■□□□□ 0.59
RRP1-201ENST00000467112 SNX21Q969T3 373 aa18.71■□□□□ 0.59
RRP1-201ENST00000467112 TNPO1Q92973 898 aaKnown RBP18.71■□□□□ 0.59
RRP1-201ENST00000467112 CD163L1Q9NR16 1453 aa18.71■□□□□ 0.59
RRP1-201ENST00000467112 RAPGEF3O95398 923 aa18.71■□□□□ 0.59
RRP1-201ENST00000467112 HSP90AB1P08238 724 aaKnown RBP18.71■□□□□ 0.59
RRP1-201ENST00000467112 PRKAR2BP31323 418 aa18.71■□□□□ 0.59
RRP1-201ENST00000467112 MRE11P49959 708 aa18.71■□□□□ 0.59
RRP1-201ENST00000467112 THUMPD2Q9BTF0 503 aaKnown RBP18.71■□□□□ 0.59
RRP1-201ENST00000467112 ATAD2Q6PL18 1390 aa18.71■□□□□ 0.58
RRP1-201ENST00000467112 BMP2KLQ5H9B9 411 aa18.7■□□□□ 0.58
RRP1-201ENST00000467112 KIF2CQ99661 725 aa18.69■□□□□ 0.58
RRP1-201ENST00000467112 PNNQ9H307 717 aaKnown RBP18.69■□□□□ 0.58
RRP1-201ENST00000467112 FOXD4L1Q9NU39 408 aa18.69■□□□□ 0.58
RRP1-201ENST00000467112 PNPLA6Q8IY17 1366 aa18.69■□□□□ 0.58
RRP1-201ENST00000467112 ZBTB7BO15156 539 aaPredicted RBP18.69■□□□□ 0.58
RRP1-201ENST00000467112 CD2BP2O95400 341 aaKnown RBP18.69■□□□□ 0.58
RRP1-201ENST00000467112 GRPEL1Q9HAV7 217 aa18.69■□□□□ 0.58
RRP1-201ENST00000467112 PIK3C2BO00750 1634 aa18.69■□□□□ 0.58
RRP1-201ENST00000467112 FCHSD2O94868 740 aa18.68■□□□□ 0.58
RRP1-201ENST00000467112 CABP1Q9NZU7 370 aa18.68■□□□□ 0.58
RRP1-201ENST00000467112 PPIP5K1Q6PFW1 1433 aa18.68■□□□□ 0.58
RRP1-201ENST00000467112 KIF13AQ9H1H9 1805 aa18.68■□□□□ 0.58
RRP1-201ENST00000467112 ELL2O00472 640 aaPredicted RBP18.68■□□□□ 0.58
RRP1-201ENST00000467112 HDGFL2Q7Z4V5 671 aaPredicted RBP18.68■□□□□ 0.58
RRP1-201ENST00000467112 TSPYL6Q8N831 410 aa18.68■□□□□ 0.58
RRP1-201ENST00000467112 PTPRMP28827 1452 aa18.67■□□□□ 0.58
RRP1-201ENST00000467112 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.67■□□□□ 0.58
RRP1-201ENST00000467112 PHACTR3Q96KR7 559 aa18.67■□□□□ 0.58
RRP1-201ENST00000467112 HMOX1P09601 288 aa18.67■□□□□ 0.58
RRP1-201ENST00000467112 CYB5RLQ6IPT4 315 aa18.66■□□□□ 0.58
RRP1-201ENST00000467112 MED14O60244 1454 aa18.66■□□□□ 0.58
RRP1-201ENST00000467112 VAMP4O75379 141 aa18.66■□□□□ 0.58
RRP1-201ENST00000467112 RBM42Q9BTD8 480 aaKnown RBP18.66■□□□□ 0.58
RRP1-201ENST00000467112 CDK19Q9BWU1 502 aa18.66■□□□□ 0.58
RRP1-201ENST00000467112 LRRC7Q96NW7 1537 aa18.66■□□□□ 0.58
RRP1-201ENST00000467112 HSP90AA1P07900 732 aaKnown RBP18.66■□□□□ 0.58
RRP1-201ENST00000467112 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
RRP1-201ENST00000467112 MRPL50Q8N5N7 158 aaKnown RBP18.65■□□□□ 0.58
RRP1-201ENST00000467112 CLCN1P35523 988 aa18.65■□□□□ 0.58
RRP1-201ENST00000467112 RAB3GAP1Q15042 981 aa18.65■□□□□ 0.58
RRP1-201ENST00000467112 SIRT2Q8IXJ6 389 aa18.65■□□□□ 0.58
RRP1-201ENST00000467112 GCC1Q96CN9 775 aa18.65■□□□□ 0.58
RRP1-201ENST00000467112 POLKQ9UBT6 870 aa18.64■□□□□ 0.57
RRP1-201ENST00000467112 CIZ1Q9ULV3 898 aaPredicted RBP18.64■□□□□ 0.57
RRP1-201ENST00000467112 BRPF1P55201 1214 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms