RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 SIRT1Q96EB6 747 aa19.75■□□□□ 0.75
ABCF3-206ENST00000466742 TECPR2O15040 1411 aa19.74■□□□□ 0.75
ABCF3-206ENST00000466742 MAP7D2Q96T17 732 aa19.74■□□□□ 0.75
ABCF3-206ENST00000466742 SENP3-EIF4A1A0A087X0R7 540 aa19.74■□□□□ 0.75
ABCF3-206ENST00000466742 CARD14Q9BXL6 1004 aa19.74■□□□□ 0.75
ABCF3-206ENST00000466742 RIMS1Q86UR5 1692 aaKnown RBP19.74■□□□□ 0.75
ABCF3-206ENST00000466742 ERBB4Q15303 1308 aa19.74■□□□□ 0.75
ABCF3-206ENST00000466742 NINLQ9Y2I6 1382 aa19.73■□□□□ 0.75
ABCF3-206ENST00000466742 SMAP1Q8IYB5 467 aaPredicted RBP19.73■□□□□ 0.75
ABCF3-206ENST00000466742 SLC12A5Q9H2X9 1139 aa19.73■□□□□ 0.75
ABCF3-206ENST00000466742 ANTXR1Q9H6X2 564 aa19.73■□□□□ 0.75
ABCF3-206ENST00000466742 MED14O60244 1454 aa19.72■□□□□ 0.75
ABCF3-206ENST00000466742 FAM135BQ49AJ0 1406 aa19.71■□□□□ 0.75
ABCF3-206ENST00000466742 BECN1Q14457 450 aa19.71■□□□□ 0.75
ABCF3-206ENST00000466742 ATAD2Q6PL18 1390 aa19.71■□□□□ 0.75
ABCF3-206ENST00000466742 MINK1Q8N4C8 1332 aaPredicted RBP19.71■□□□□ 0.75
ABCF3-206ENST00000466742 MYH16Q9H6N6 1097 aa19.71■□□□□ 0.75
ABCF3-206ENST00000466742 CABP2Q9NPB3 220 aa19.71■□□□□ 0.75
ABCF3-206ENST00000466742 PDIA4P13667 645 aaKnown RBP19.7■□□□□ 0.74
ABCF3-206ENST00000466742 TERF1P54274 439 aa19.7■□□□□ 0.74
ABCF3-206ENST00000466742 CEP170BQ9Y4F5 1589 aaPredicted RBP19.7■□□□□ 0.74
ABCF3-206ENST00000466742 USP19O94966 1318 aa19.69■□□□□ 0.74
ABCF3-206ENST00000466742 WAPLQ7Z5K2 1190 aa19.69■□□□□ 0.74
ABCF3-206ENST00000466742 ISY1Q9ULR0 285 aaKnown RBP19.69■□□□□ 0.74
ABCF3-206ENST00000466742 PLEKHH1Q9ULM0 1364 aa19.69■□□□□ 0.74
ABCF3-206ENST00000466742 SRPK2P78362 688 aaKnown RBP19.69■□□□□ 0.74
ABCF3-206ENST00000466742 VIRMAQ69YN4 1812 aaKnown RBP19.68■□□□□ 0.74
ABCF3-206ENST00000466742 ANKRD36BQ8N2N9 1353 aa19.68■□□□□ 0.74
ABCF3-206ENST00000466742 PLIN1O60240 522 aa19.68■□□□□ 0.74
ABCF3-206ENST00000466742 KIAA1211Q6ZU35 1233 aa19.68■□□□□ 0.74
ABCF3-206ENST00000466742 KNDC1Q76NI1 1749 aa19.67■□□□□ 0.74
ABCF3-206ENST00000466742 CPS1P31327 1500 aa19.67■□□□□ 0.74
ABCF3-206ENST00000466742 TBX22Q9Y458 520 aa19.67■□□□□ 0.74
ABCF3-206ENST00000466742 NSD3Q9BZ95 1437 aa19.66■□□□□ 0.74
ABCF3-206ENST00000466742 ARXQ96QS3 562 aa19.66■□□□□ 0.74
ABCF3-206ENST00000466742 CDK19Q9BWU1 502 aa19.66■□□□□ 0.74
ABCF3-206ENST00000466742 PPP2R1AP30153 589 aa19.65■□□□□ 0.74
ABCF3-206ENST00000466742 BCL11BQ9C0K0 894 aaPredicted RBP19.65■□□□□ 0.74
ABCF3-206ENST00000466742 GRPEL1Q9HAV7 217 aa19.64■□□□□ 0.74
ABCF3-206ENST00000466742 SLKQ9H2G2 1235 aaPredicted RBP19.64■□□□□ 0.73
ABCF3-206ENST00000466742 MCM4P33991 863 aa19.63■□□□□ 0.73
ABCF3-206ENST00000466742 RIPK4P57078 832 aa19.63■□□□□ 0.73
ABCF3-206ENST00000466742 SLC26A8Q96RN1 970 aa19.63■□□□□ 0.73
ABCF3-206ENST00000466742 DIP2AQ14689 1571 aa19.63■□□□□ 0.73
ABCF3-206ENST00000466742 USP32Q8NFA0 1604 aa19.62■□□□□ 0.73
ABCF3-206ENST00000466742 ROBO2Q9HCK4 1378 aa19.62■□□□□ 0.73
ABCF3-206ENST00000466742 TRIM44Q96DX7 344 aaPredicted RBP19.62■□□□□ 0.73
ABCF3-206ENST00000466742 ZNF142P52746 1687 aaPredicted RBP19.62■□□□□ 0.73
ABCF3-206ENST00000466742 CGNL1Q0VF96 1302 aa19.61■□□□□ 0.73
ABCF3-206ENST00000466742 INSRP06213 1382 aa19.61■□□□□ 0.73
ABCF3-206ENST00000466742 WASLO00401 505 aaPredicted RBP19.6■□□□□ 0.73
ABCF3-206ENST00000466742 PTPRUQ92729 1446 aa19.6■□□□□ 0.73
ABCF3-206ENST00000466742 OFD1O75665 1012 aa19.6■□□□□ 0.73
ABCF3-206ENST00000466742 TERF2IPQ9NYB0 399 aa19.6■□□□□ 0.73
ABCF3-206ENST00000466742 A0A1W2PP64 1363 aa19.6■□□□□ 0.73
ABCF3-206ENST00000466742 UTP14CQ5TAP6 766 aaKnown RBP19.59■□□□□ 0.73
ABCF3-206ENST00000466742 NSD2O96028 1365 aa19.59■□□□□ 0.73
ABCF3-206ENST00000466742 CDCA7LQ96GN5 454 aa19.58■□□□□ 0.73
ABCF3-206ENST00000466742 ANKLE2Q86XL3 938 aa19.58■□□□□ 0.72
ABCF3-206ENST00000466742 GZF1Q9H116 711 aaPredicted RBP19.58■□□□□ 0.72
ABCF3-206ENST00000466742 CD163L1Q9NR16 1453 aa19.58■□□□□ 0.72
ABCF3-206ENST00000466742 SETD1BQ9UPS6 1966 aaKnown RBP19.58■□□□□ 0.72
ABCF3-206ENST00000466742 PIK3R4Q99570 1358 aa19.57■□□□□ 0.72
ABCF3-206ENST00000466742 TRAK2O60296 914 aa19.57■□□□□ 0.72
ABCF3-206ENST00000466742 PTCH1Q13635 1447 aa19.57■□□□□ 0.72
ABCF3-206ENST00000466742 MTERF4Q7Z6M4 381 aaKnown RBP19.57■□□□□ 0.72
ABCF3-206ENST00000466742 BBXQ8WY36 941 aaPredicted RBP19.57■□□□□ 0.72
ABCF3-206ENST00000466742 AMOTL2Q9Y2J4 779 aa19.57■□□□□ 0.72
ABCF3-206ENST00000466742 NCLP19338 710 aaKnown RBP19.56■□□□□ 0.72
ABCF3-206ENST00000466742 C20orf194Q5TEA3 1177 aa19.56■□□□□ 0.72
ABCF3-206ENST00000466742 CABP1Q9NZU7 370 aa19.56■□□□□ 0.72
ABCF3-206ENST00000466742 HDGFL2Q7Z4V5 671 aaPredicted RBP19.55■□□□□ 0.72
ABCF3-206ENST00000466742 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.54■□□□□ 0.72
ABCF3-206ENST00000466742 MORC1Q86VD1 984 aa19.54■□□□□ 0.72
ABCF3-206ENST00000466742 ATP7BP35670 1465 aa19.54■□□□□ 0.72
ABCF3-206ENST00000466742 GTF2E1P29083 439 aaPredicted RBP19.54■□□□□ 0.72
ABCF3-206ENST00000466742 ADGRB2O60241 1585 aa19.54■□□□□ 0.72
ABCF3-206ENST00000466742 DMTNQ08495 405 aa19.52■□□□□ 0.71
ABCF3-206ENST00000466742 NUDT16Q96DE0 195 aaKnown RBP19.51■□□□□ 0.71
ABCF3-206ENST00000466742 CCDC61Q9Y6R9 512 aa19.51■□□□□ 0.71
ABCF3-206ENST00000466742 BLMP54132 1417 aaPredicted RBP19.5■□□□□ 0.71
ABCF3-206ENST00000466742 POLR3AO14802 1390 aaPredicted RBP19.5■□□□□ 0.71
ABCF3-206ENST00000466742 FAM13BQ9NYF5 915 aa19.5■□□□□ 0.71
ABCF3-206ENST00000466742 ZHX1Q9UKY1 873 aaPredicted RBP19.5■□□□□ 0.71
ABCF3-206ENST00000466742 PPIP5K1Q6PFW1 1433 aa19.49■□□□□ 0.71
ABCF3-206ENST00000466742 CPSF1Q10570 1443 aaKnown RBP19.49■□□□□ 0.71
ABCF3-206ENST00000466742 XRN1Q8IZH2 1706 aaKnown RBP19.49■□□□□ 0.71
ABCF3-206ENST00000466742 SEC24BO95487 1268 aa19.48■□□□□ 0.71
ABCF3-206ENST00000466742 ZSCAN30Q86W11 494 aa19.48■□□□□ 0.71
ABCF3-206ENST00000466742 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.48■□□□□ 0.71
ABCF3-206ENST00000466742 NAP1L2Q9ULW6 460 aaPredicted RBP19.48■□□□□ 0.71
ABCF3-206ENST00000466742 TBC1D2Q9BYX2 928 aa19.48■□□□□ 0.71
ABCF3-206ENST00000466742 FYB1O15117 783 aa19.47■□□□□ 0.71
ABCF3-206ENST00000466742 CANXP27824 592 aaKnown RBP19.47■□□□□ 0.71
ABCF3-206ENST00000466742 WDR43Q15061 677 aaKnown RBP eCLIP19.47■□□□□ 0.71
ABCF3-206ENST00000466742 ADAMTS8Q9UP79 889 aa19.47■□□□□ 0.71
ABCF3-206ENST00000466742 PRR36Q9H6K5 1346 aa19.47■□□□□ 0.71
ABCF3-206ENST00000466742 TAF7LQ5H9L4 462 aa19.46■□□□□ 0.71
ABCF3-206ENST00000466742 PPP1R9BQ96SB3 815 aa19.46■□□□□ 0.71
ABCF3-206ENST00000466742 DDX11L8A8MPP1 907 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms