RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 NALCNQ8IZF0 1738 aa28.08■■■□□ 2.09
PPP1R3F-203ENST00000466508 ZNF335Q9H4Z2 1342 aaPredicted RBP28.06■■■□□ 2.08
PPP1R3F-203ENST00000466508 NUTM2FA1L443 756 aa28.06■■■□□ 2.08
PPP1R3F-203ENST00000466508 FKBP8Q14318 412 aa28.06■■■□□ 2.08
PPP1R3F-203ENST00000466508 ILDR1Q86SU0 546 aaPredicted RBP28.05■■■□□ 2.08
PPP1R3F-203ENST00000466508 ANKARQ7Z5J8 1434 aa28.05■■■□□ 2.08
PPP1R3F-203ENST00000466508 ACEP12821 1306 aa28.04■■■□□ 2.08
PPP1R3F-203ENST00000466508 LTBP4Q8N2S1 1624 aa28.04■■■□□ 2.08
PPP1R3F-203ENST00000466508 COL3A1P02461 1466 aaPredicted RBP28.03■■■□□ 2.08
PPP1R3F-203ENST00000466508 NWD1Q149M9 1564 aa28.03■■■□□ 2.08
PPP1R3F-203ENST00000466508 MAP2P11137 1827 aaKnown RBP28.02■■■□□ 2.08
PPP1R3F-203ENST00000466508 USP6P35125 1406 aa28.02■■■□□ 2.08
PPP1R3F-203ENST00000466508 NME9Q86XW9 330 aa28.02■■■□□ 2.08
PPP1R3F-203ENST00000466508 CCDC146Q8IYE0 955 aa28.02■■■□□ 2.08
PPP1R3F-203ENST00000466508 FBXO41Q8TF61 875 aa28.02■■■□□ 2.08
PPP1R3F-203ENST00000466508 PNPLA6Q8IY17 1366 aa27.98■■■□□ 2.07
PPP1R3F-203ENST00000466508 ADGRL3Q9HAR2 1447 aa27.97■■■□□ 2.07
PPP1R3F-203ENST00000466508 NGEFQ8N5V2 710 aa27.96■■■□□ 2.07
PPP1R3F-203ENST00000466508 COG3Q96JB2 828 aa27.96■■■□□ 2.07
PPP1R3F-203ENST00000466508 TTC21BQ7Z4L5 1316 aa27.96■■■□□ 2.07
PPP1R3F-203ENST00000466508 ZNF521Q96K83 1311 aa27.96■■■□□ 2.07
PPP1R3F-203ENST00000466508 SSH2Q76I76 1423 aa27.96■■■□□ 2.07
PPP1R3F-203ENST00000466508 APAF1O14727 1248 aa27.95■■■□□ 2.07
PPP1R3F-203ENST00000466508 AATKQ6ZMQ8 1374 aa27.95■■■□□ 2.07
PPP1R3F-203ENST00000466508 CDCA7LQ96GN5 454 aa27.93■■■□□ 2.06
PPP1R3F-203ENST00000466508 ZRANB1Q9UGI0 708 aa27.93■■■□□ 2.06
PPP1R3F-203ENST00000466508 POLKQ9UBT6 870 aa27.93■■■□□ 2.06
PPP1R3F-203ENST00000466508 PMFBP1Q8TBY8 1022 aa27.92■■■□□ 2.06
PPP1R3F-203ENST00000466508 IQSEC2Q5JU85 1478 aa27.92■■■□□ 2.06
PPP1R3F-203ENST00000466508 OVOS2A0A0J9YW53 1432 aa27.91■■■□□ 2.06
PPP1R3F-203ENST00000466508 OVOS2Q6IE36 1432 aa27.91■■■□□ 2.06
PPP1R3F-203ENST00000466508 RUNDC1Q96C34 613 aa27.91■■■□□ 2.06
PPP1R3F-203ENST00000466508 U2AF1L5P0DN76 240 aaPredicted RBP27.9■■■□□ 2.06
PPP1R3F-203ENST00000466508 U2AF1Q01081 240 aaKnown RBP eCLIP27.9■■■□□ 2.06
PPP1R3F-203ENST00000466508 NGDNQ8NEJ9 315 aaKnown RBP27.9■■■□□ 2.06
PPP1R3F-203ENST00000466508 CDK12Q9NYV4 1490 aaPredicted RBP27.9■■■□□ 2.06
PPP1R3F-203ENST00000466508 TTC21AQ8NDW8 1320 aa27.89■■■□□ 2.06
PPP1R3F-203ENST00000466508 RNF123Q5XPI4 1314 aa27.89■■■□□ 2.05
PPP1R3F-203ENST00000466508 DIAPH1O60610 1272 aaKnown RBP27.87■■■□□ 2.05
PPP1R3F-203ENST00000466508 FBLN1P23142 703 aa27.87■■■□□ 2.05
PPP1R3F-203ENST00000466508 RBM33Q96EV2 1170 aaKnown RBP27.87■■■□□ 2.05
PPP1R3F-203ENST00000466508 GOLGA2Q08379 1002 aa27.86■■■□□ 2.05
PPP1R3F-203ENST00000466508 PIK3C2AO00443 1686 aa27.84■■■□□ 2.05
PPP1R3F-203ENST00000466508 U2SURPO15042 1029 aaKnown RBP27.84■■■□□ 2.05
PPP1R3F-203ENST00000466508 EMILIN1Q9Y6C2 1016 aa27.84■■■□□ 2.05
PPP1R3F-203ENST00000466508 PPM1GO15355 546 aaPredicted RBP27.83■■■□□ 2.05
PPP1R3F-203ENST00000466508 IRX6P78412 446 aaPredicted RBP27.83■■■□□ 2.05
PPP1R3F-203ENST00000466508 ERICH6BQ5W0A0 696 aa27.83■■■□□ 2.04
PPP1R3F-203ENST00000466508 TCP11L2Q8N4U5 519 aa27.83■■■□□ 2.04
PPP1R3F-203ENST00000466508 USP31Q70CQ4 1352 aa27.82■■■□□ 2.04
PPP1R3F-203ENST00000466508 RCAN3Q9UKA8 241 aa27.81■■■□□ 2.04
PPP1R3F-203ENST00000466508 C14orf37Q86TY3 774 aa27.81■■■□□ 2.04
PPP1R3F-203ENST00000466508 NCBP3Q53F19 620 aaKnown RBP27.8■■■□□ 2.04
PPP1R3F-203ENST00000466508 DUSP27Q5VZP5 1158 aa27.8■■■□□ 2.04
PPP1R3F-203ENST00000466508 STRCP1A6NGW2 1772 aa27.8■■■□□ 2.04
PPP1R3F-203ENST00000466508 USP54Q70EL1 1684 aa27.8■■■□□ 2.04
PPP1R3F-203ENST00000466508 PHF8Q9UPP1 1060 aa27.79■■■□□ 2.04
PPP1R3F-203ENST00000466508 SLFN5Q08AF3 891 aa27.78■■■□□ 2.04
PPP1R3F-203ENST00000466508 RRS1Q15050 365 aaKnown RBP27.78■■■□□ 2.04
PPP1R3F-203ENST00000466508 PROSER2Q86WR7 435 aaPredicted RBP27.78■■■□□ 2.04
PPP1R3F-203ENST00000466508 WWC1Q8IX03 1113 aa27.78■■■□□ 2.04
PPP1R3F-203ENST00000466508 PLEKHF1Q96S99 279 aa27.78■■■□□ 2.04
PPP1R3F-203ENST00000466508 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
PPP1R3F-203ENST00000466508 MARF1Q9Y4F3 1742 aaKnown RBP27.76■■■□□ 2.03
PPP1R3F-203ENST00000466508 CCDC27Q2M243 656 aa27.76■■■□□ 2.03
PPP1R3F-203ENST00000466508 TRMT2AQ8IZ69 625 aaKnown RBP27.76■■■□□ 2.03
PPP1R3F-203ENST00000466508 LRRC7Q96NW7 1537 aa27.76■■■□□ 2.03
PPP1R3F-203ENST00000466508 PNNQ9H307 717 aaKnown RBP27.75■■■□□ 2.03
PPP1R3F-203ENST00000466508 E9PSI1 815 aa27.74■■■□□ 2.03
PPP1R3F-203ENST00000466508 RRP7AQ9Y3A4 280 aaKnown RBP27.74■■■□□ 2.03
PPP1R3F-203ENST00000466508 IL13P35225 146 aa27.74■■■□□ 2.03
PPP1R3F-203ENST00000466508 FCHSD2O94868 740 aa27.73■■■□□ 2.03
PPP1R3F-203ENST00000466508 NEUROD2Q15784 382 aa27.73■■■□□ 2.03
PPP1R3F-203ENST00000466508 PEAK1Q9H792 1746 aa27.73■■■□□ 2.03
PPP1R3F-203ENST00000466508 MAPK8IP3Q9UPT6 1336 aa27.72■■■□□ 2.03
PPP1R3F-203ENST00000466508 UBAP1LF5GYI3 381 aa27.72■■■□□ 2.03
PPP1R3F-203ENST00000466508 SPINK5Q9NQ38 1064 aaPredicted RBP27.72■■■□□ 2.03
PPP1R3F-203ENST00000466508 ESCO1Q5FWF5 840 aa27.71■■■□□ 2.03
PPP1R3F-203ENST00000466508 RRP1P56182 461 aaKnown RBP27.7■■■□□ 2.03
PPP1R3F-203ENST00000466508 C19orf44Q9H6X5 657 aa27.7■■■□□ 2.03
PPP1R3F-203ENST00000466508 NCOA3Q9Y6Q9 1424 aa27.7■■■□□ 2.02
PPP1R3F-203ENST00000466508 RSPH6AQ9H0K4 717 aa27.69■■■□□ 2.02
PPP1R3F-203ENST00000466508 WDR63Q8IWG1 891 aa27.68■■■□□ 2.02
PPP1R3F-203ENST00000466508 TMEM94Q12767 1356 aa27.67■■■□□ 2.02
PPP1R3F-203ENST00000466508 KIF1AQ12756 1690 aa27.67■■■□□ 2.02
PPP1R3F-203ENST00000466508 TMPOP42166 694 aaKnown RBP27.67■■■□□ 2.02
PPP1R3F-203ENST00000466508 NLRP6P59044 892 aa27.67■■■□□ 2.02
PPP1R3F-203ENST00000466508 DCCP43146 1447 aa27.66■■■□□ 2.02
PPP1R3F-203ENST00000466508 ABTB2Q8N961 1025 aa27.66■■■□□ 2.02
PPP1R3F-203ENST00000466508 PAK3O75914 559 aaPredicted RBP27.65■■■□□ 2.02
PPP1R3F-203ENST00000466508 TOM1O60784 492 aa27.64■■■□□ 2.02
PPP1R3F-203ENST00000466508 PRKAR2BP31323 418 aa27.64■■■□□ 2.02
PPP1R3F-203ENST00000466508 MAP3K19Q56UN5 1328 aa27.64■■■□□ 2.02
PPP1R3F-203ENST00000466508 C1orf167Q5SNV9 1468 aa27.64■■■□□ 2.01
PPP1R3F-203ENST00000466508 SOX12O15370 315 aa27.64■■■□□ 2.01
PPP1R3F-203ENST00000466508 SBNO1A3KN83 1393 aa27.63■■■□□ 2.01
PPP1R3F-203ENST00000466508 RGPD1P0DJD0 1748 aa27.63■■■□□ 2.01
PPP1R3F-203ENST00000466508 PSME1Q06323 249 aa27.63■■■□□ 2.01
PPP1R3F-203ENST00000466508 ORAI2Q96SN7 254 aa27.63■■■□□ 2.01
PPP1R3F-203ENST00000466508 PPP4R2Q9NY27 417 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms