RNA–Protein interactions for RNA: ENST00000466477.5

LCLAT1-206, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-206ENST00000466477 GLI3P10071 1580 aa21.57■■□□□ 1.04
LCLAT1-206ENST00000466477 GJD4Q96KN9 370 aaPredicted RBP21.57■■□□□ 1.04
LCLAT1-206ENST00000466477 NBPF8Q3BBV2 869 aa21.56■■□□□ 1.04
LCLAT1-206ENST00000466477 ACEP12821 1306 aa21.55■■□□□ 1.04
LCLAT1-206ENST00000466477 FAM83GA6ND36 823 aa21.55■■□□□ 1.04
LCLAT1-206ENST00000466477 PPIP5K1Q6PFW1 1433 aa21.55■■□□□ 1.04
LCLAT1-206ENST00000466477 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.54■■□□□ 1.04
LCLAT1-206ENST00000466477 TRIM26Q12899 539 aaPredicted RBP21.53■■□□□ 1.04
LCLAT1-206ENST00000466477 CCDC61Q9Y6R9 512 aa21.53■■□□□ 1.04
LCLAT1-206ENST00000466477 ATAD2Q6PL18 1390 aa21.52■■□□□ 1.04
LCLAT1-206ENST00000466477 BTG4Q9NY30 223 aa21.52■■□□□ 1.04
LCLAT1-206ENST00000466477 A0A0G2JS52 829 aa21.51■■□□□ 1.03
LCLAT1-206ENST00000466477 MYT1Q01538 1121 aa21.51■■□□□ 1.03
LCLAT1-206ENST00000466477 TONSLQ96HA7 1378 aa21.5■■□□□ 1.03
LCLAT1-206ENST00000466477 CRYBG1Q9Y4K1 1723 aa21.5■■□□□ 1.03
LCLAT1-206ENST00000466477 CHRNA2Q15822 529 aa21.5■■□□□ 1.03
LCLAT1-206ENST00000466477 POLR3AO14802 1390 aaPredicted RBP21.49■■□□□ 1.03
LCLAT1-206ENST00000466477 ZC3H6P61129 1189 aaKnown RBP21.49■■□□□ 1.03
LCLAT1-206ENST00000466477 PRDM11Q9NQV5 511 aa21.49■■□□□ 1.03
LCLAT1-206ENST00000466477 KIAA0232Q92628 1395 aa21.48■■□□□ 1.03
LCLAT1-206ENST00000466477 PHRF1Q9P1Y6 1649 aaKnown RBP21.48■■□□□ 1.03
LCLAT1-206ENST00000466477 VPS72Q15906 364 aa21.48■■□□□ 1.03
LCLAT1-206ENST00000466477 NRAPQ86VF7 1730 aa21.48■■□□□ 1.03
LCLAT1-206ENST00000466477 CABP1Q9NZU7 370 aa21.47■■□□□ 1.03
LCLAT1-206ENST00000466477 PLEKHG3A1L390 1219 aa21.46■■□□□ 1.03
LCLAT1-206ENST00000466477 ZBTB7CA1YPR0 619 aa21.46■■□□□ 1.03
LCLAT1-206ENST00000466477 SEPT12Q8IYM1 358 aa21.46■■□□□ 1.03
LCLAT1-206ENST00000466477 NWD2Q9ULI1 1742 aa21.46■■□□□ 1.03
LCLAT1-206ENST00000466477 EP400Q96L91 3159 aa21.45■■□□□ 1.02
LCLAT1-206ENST00000466477 FAM98CQ17RN3 349 aaKnown RBP21.45■■□□□ 1.02
LCLAT1-206ENST00000466477 ABTB2Q8N961 1025 aa21.45■■□□□ 1.02
LCLAT1-206ENST00000466477 COL14A1Q05707 1796 aaKnown RBP21.45■■□□□ 1.02
LCLAT1-206ENST00000466477 STRN4Q9NRL3 753 aa21.44■■□□□ 1.02
LCLAT1-206ENST00000466477 CARD11Q9BXL7 1154 aa21.43■■□□□ 1.02
LCLAT1-206ENST00000466477 EVC2Q86UK5 1308 aa21.43■■□□□ 1.02
LCLAT1-206ENST00000466477 NRKQ7Z2Y5 1582 aa21.43■■□□□ 1.02
LCLAT1-206ENST00000466477 USP6P35125 1406 aa21.39■■□□□ 1.02
LCLAT1-206ENST00000466477 BRWD3Q6RI45 1802 aa21.39■■□□□ 1.02
LCLAT1-206ENST00000466477 FAM182BQ5T319 152 aa21.39■■□□□ 1.01
LCLAT1-206ENST00000466477 USP35Q9P2H5 1018 aa21.39■■□□□ 1.01
LCLAT1-206ENST00000466477 SOX12O15370 315 aa21.38■■□□□ 1.01
LCLAT1-206ENST00000466477 USP19O94966 1318 aa21.35■■□□□ 1.01
LCLAT1-206ENST00000466477 SPATA31A5Q5VU36 1347 aa21.35■■□□□ 1.01
LCLAT1-206ENST00000466477 SPATA31A7Q8IWB4 1347 aa21.35■■□□□ 1.01
LCLAT1-206ENST00000466477 NLRP6P59044 892 aa21.35■■□□□ 1.01
LCLAT1-206ENST00000466477 KRT27Q7Z3Y8 459 aa21.35■■□□□ 1.01
LCLAT1-206ENST00000466477 PIK3C2AO00443 1686 aa21.34■■□□□ 1.01
LCLAT1-206ENST00000466477 DEFB132Q7Z7B7 95 aa21.33■■□□□ 1.01
LCLAT1-206ENST00000466477 NLRP13Q86W25 1043 aa21.33■■□□□ 1.01
LCLAT1-206ENST00000466477 PCGF6Q9BYE7 350 aa21.32■■□□□ 1
LCLAT1-206ENST00000466477 CAMTA1Q9Y6Y1 1673 aa21.31■■□□□ 1
LCLAT1-206ENST00000466477 SSH2Q76I76 1423 aa21.31■■□□□ 1
LCLAT1-206ENST00000466477 GCP02774 474 aa21.31■■□□□ 1
LCLAT1-206ENST00000466477 EVA1CP58658 441 aa21.31■■□□□ 1
LCLAT1-206ENST00000466477 LARP1Q6PKG0 1096 aaKnown RBP21.31■■□□□ 1
LCLAT1-206ENST00000466477 TMC1Q8TDI8 760 aa21.31■■□□□ 1
LCLAT1-206ENST00000466477 SPATA31A1Q5TZJ5 1347 aa21.29■■□□□ 1
LCLAT1-206ENST00000466477 TTC21BQ7Z4L5 1316 aa21.29■■□□□ 1
LCLAT1-206ENST00000466477 BLMP54132 1417 aaPredicted RBP21.29■■□□□ 1
LCLAT1-206ENST00000466477 ONECUT3O60422 494 aaPredicted RBP21.29■■□□□ 1
LCLAT1-206ENST00000466477 ZRANB1Q9UGI0 708 aa21.29■■□□□ 1
LCLAT1-206ENST00000466477 LMO7Q8WWI1 1683 aa21.28■■□□□ 1
LCLAT1-206ENST00000466477 KTN1Q86UP2 1357 aaKnown RBP21.28■■□□□ 1
LCLAT1-206ENST00000466477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.28■■□□□ 1
LCLAT1-206ENST00000466477 SLIT3O75094 1523 aa21.28■■□□□ 1
LCLAT1-206ENST00000466477 THSD7AQ9UPZ6 1657 aa21.28■■□□□ 1
LCLAT1-206ENST00000466477 CPDO75976 1380 aa21.27■■□□□ 1
LCLAT1-206ENST00000466477 COL5A2P05997 1499 aaPredicted RBP21.26■□□□□ 0.99
LCLAT1-206ENST00000466477 AKAP12Q02952 1782 aa21.25■□□□□ 0.99
LCLAT1-206ENST00000466477 SBNO2Q9Y2G9 1366 aa21.25■□□□□ 0.99
LCLAT1-206ENST00000466477 SF3B2Q13435 895 aaKnown RBP21.25■□□□□ 0.99
LCLAT1-206ENST00000466477 CPSF1Q10570 1443 aaKnown RBP21.24■□□□□ 0.99
LCLAT1-206ENST00000466477 ST20-MTHFSA0A0A6YYL1 179 aa21.24■□□□□ 0.99
LCLAT1-206ENST00000466477 SLC12A5Q9H2X9 1139 aa21.24■□□□□ 0.99
LCLAT1-206ENST00000466477 CD163L1Q9NR16 1453 aa21.24■□□□□ 0.99
LCLAT1-206ENST00000466477 BRD4O60885 1362 aaPredicted RBP21.23■□□□□ 0.99
LCLAT1-206ENST00000466477 NME9Q86XW9 330 aa21.23■□□□□ 0.99
LCLAT1-206ENST00000466477 CCDC125Q86Z20 511 aa21.22■□□□□ 0.99
LCLAT1-206ENST00000466477 MON2Q7Z3U7 1717 aa21.21■□□□□ 0.99
LCLAT1-206ENST00000466477 ZNF692Q9BU19 519 aaPredicted RBP21.2■□□□□ 0.98
LCLAT1-206ENST00000466477 AXIN2Q9Y2T1 843 aa21.2■□□□□ 0.98
LCLAT1-206ENST00000466477 TCP11L2Q8N4U5 519 aa21.19■□□□□ 0.98
LCLAT1-206ENST00000466477 TESK2Q96S53 571 aa21.19■□□□□ 0.98
LCLAT1-206ENST00000466477 TTC21AQ8NDW8 1320 aa21.19■□□□□ 0.98
LCLAT1-206ENST00000466477 A0A1W2PP64 1363 aa21.19■□□□□ 0.98
LCLAT1-206ENST00000466477 HDGFL2Q7Z4V5 671 aaPredicted RBP21.18■□□□□ 0.98
LCLAT1-206ENST00000466477 USP47Q96K76 1375 aa21.18■□□□□ 0.98
LCLAT1-206ENST00000466477 TOM1L2Q6ZVM7 507 aa21.17■□□□□ 0.98
LCLAT1-206ENST00000466477 AATKQ6ZMQ8 1374 aa21.17■□□□□ 0.98
LCLAT1-206ENST00000466477 NFAT5O94916 1531 aa21.17■□□□□ 0.98
LCLAT1-206ENST00000466477 CRB1P82279 1406 aa21.16■□□□□ 0.98
LCLAT1-206ENST00000466477 TRIM37O94972 964 aa21.16■□□□□ 0.98
LCLAT1-206ENST00000466477 EN1Q05925 392 aaPredicted RBP21.16■□□□□ 0.98
LCLAT1-206ENST00000466477 SRCAPQ6ZRS2 3230 aa21.16■□□□□ 0.98
LCLAT1-206ENST00000466477 CSB-PGBD3P0DP91 1061 aa21.15■□□□□ 0.98
LCLAT1-206ENST00000466477 BAG6P46379 1132 aa21.15■□□□□ 0.98
LCLAT1-206ENST00000466477 PDE3BQ13370 1112 aa21.15■□□□□ 0.98
LCLAT1-206ENST00000466477 BARGINQ6ZT62 677 aa21.14■□□□□ 0.97
LCLAT1-206ENST00000466477 ARHGEF25Q86VW2 580 aa21.14■□□□□ 0.97
LCLAT1-206ENST00000466477 COL18A1P39060 1754 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms