RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 LINC01559Q495D7 138 aa13.22□□□□□ -0.29
SSB-207ENST00000465871 RTL5Q5HYW3 569 aaPredicted RBP13.22□□□□□ -0.29
SSB-207ENST00000465871 EHBP1Q8NDI1 1231 aa13.22□□□□□ -0.29
SSB-207ENST00000465871 HELBQ8NG08 1087 aaPredicted RBP13.22□□□□□ -0.29
SSB-207ENST00000465871 AAASQ9NRG9 546 aa13.22□□□□□ -0.29
SSB-207ENST00000465871 MAP10Q9P2G4 905 aa13.22□□□□□ -0.29
SSB-207ENST00000465871 ST8SIA5O15466 376 aa13.21□□□□□ -0.29
SSB-207ENST00000465871 ZNF511Q8NB15 262 aa13.21□□□□□ -0.29
SSB-207ENST00000465871 BAP1Q92560 729 aa13.21□□□□□ -0.29
SSB-207ENST00000465871 J3QL48 77 aa13.2□□□□□ -0.3
SSB-207ENST00000465871 CTC1Q2NKJ3 1217 aa13.2□□□□□ -0.3
SSB-207ENST00000465871 SIAH2O43255 324 aa13.17□□□□□ -0.3
SSB-207ENST00000465871 SMCPP49901 116 aaPredicted RBP13.17□□□□□ -0.3
SSB-207ENST00000465871 ZNF787Q6DD87 383 aa13.17□□□□□ -0.3
SSB-207ENST00000465871 AXIN1O15169 862 aa13.16□□□□□ -0.3
SSB-207ENST00000465871 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSB-207ENST00000465871 ALDH1A1P00352 501 aa13.15□□□□□ -0.3
SSB-207ENST00000465871 NEUROD2Q15784 382 aa13.15□□□□□ -0.3
SSB-207ENST00000465871 PROCA1Q8NCQ7 364 aaPredicted RBP13.14□□□□□ -0.31
SSB-207ENST00000465871 VARSP26640 1264 aaKnown RBP13.13□□□□□ -0.31
SSB-207ENST00000465871 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
SSB-207ENST00000465871 HPS1Q92902 700 aa13.12□□□□□ -0.31
SSB-207ENST00000465871 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
SSB-207ENST00000465871 FBXO31Q5XUX0 539 aaPredicted RBP13.11□□□□□ -0.31
SSB-207ENST00000465871 ATP1B4Q9UN42 357 aaPredicted RBP13.11□□□□□ -0.31
SSB-207ENST00000465871 TLL2Q9Y6L7 1015 aa13.11□□□□□ -0.31
SSB-207ENST00000465871 CTDSPL2Q05D32 466 aa13.09□□□□□ -0.31
SSB-207ENST00000465871 ARMC2Q8NEN0 867 aa13.09□□□□□ -0.31
SSB-207ENST00000465871 DACH1Q9UI36 760 aa13.09□□□□□ -0.31
SSB-207ENST00000465871 WASF2Q9Y6W5 498 aa13.09□□□□□ -0.31
SSB-207ENST00000465871 MPNDQ8N594 471 aa13.08□□□□□ -0.32
SSB-207ENST00000465871 FOXJ1Q92949 421 aa13.08□□□□□ -0.32
SSB-207ENST00000465871 POTECB2RU33 542 aa13.07□□□□□ -0.32
SSB-207ENST00000465871 BRPF1P55201 1214 aaPredicted RBP13.07□□□□□ -0.32
SSB-207ENST00000465871 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
SSB-207ENST00000465871 GOPCQ9HD26 462 aa13.07□□□□□ -0.32
SSB-207ENST00000465871 FAM174AQ8TBP5 190 aa13.06□□□□□ -0.32
SSB-207ENST00000465871 BPHLQ86WA6 291 aaPredicted RBP13.05□□□□□ -0.32
SSB-207ENST00000465871 AGERQ15109 404 aa13.04□□□□□ -0.32
SSB-207ENST00000465871 C4orf48Q5BLP8 95 aa13.03□□□□□ -0.32
SSB-207ENST00000465871 LRRN4Q8WUT4 740 aa13.03□□□□□ -0.32
SSB-207ENST00000465871 IL27Q8NEV9 243 aa13.02□□□□□ -0.33
SSB-207ENST00000465871 GPKOWQ92917 476 aaPredicted RBP eCLIP13.02□□□□□ -0.332e-20■□□□□ 8.1
SSB-207ENST00000465871 PCMTD1Q96MG8 357 aaPredicted RBP13.02□□□□□ -0.33
SSB-207ENST00000465871 ATP13A2Q9NQ11 1180 aa13.02□□□□□ -0.33
SSB-207ENST00000465871 GMPR2Q9P2T1 348 aaKnown RBP13.02□□□□□ -0.33
SSB-207ENST00000465871 AP1G2O75843 785 aa13.01□□□□□ -0.33
SSB-207ENST00000465871 SH3RF1Q7Z6J0 888 aa13.01□□□□□ -0.33
SSB-207ENST00000465871 CDK15Q96Q40 435 aa13□□□□□ -0.33
SSB-207ENST00000465871 ADH1CP00326 375 aa12.99□□□□□ -0.33
SSB-207ENST00000465871 RFC5P40937 340 aa12.99□□□□□ -0.33
SSB-207ENST00000465871 NNTQ13423 1086 aa12.99□□□□□ -0.33
SSB-207ENST00000465871 SH3BP5LQ7L8J4 393 aa12.99□□□□□ -0.33
SSB-207ENST00000465871 C1QTNF2Q9BXJ5 285 aa12.98□□□□□ -0.33
SSB-207ENST00000465871 USP17L8P0C7I0 530 aa12.97□□□□□ -0.33
SSB-207ENST00000465871 NR6A1Q15406 480 aa12.97□□□□□ -0.33
SSB-207ENST00000465871 C11orf95C9JLR9 678 aaPredicted RBP12.96□□□□□ -0.33
SSB-207ENST00000465871 CAPN5O15484 640 aaPredicted RBP12.96□□□□□ -0.33
SSB-207ENST00000465871 ZNF775Q96BV0 537 aaPredicted RBP12.96□□□□□ -0.33
SSB-207ENST00000465871 FKBPLQ9UIM3 349 aa12.96□□□□□ -0.33
SSB-207ENST00000465871 ZC3H4Q9UPT8 1303 aaKnown RBP12.95□□□□□ -0.34
SSB-207ENST00000465871 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
SSB-207ENST00000465871 ARID5BQ14865 1188 aa12.95□□□□□ -0.34
SSB-207ENST00000465871 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
SSB-207ENST00000465871 SENP2Q9HC62 589 aa12.94□□□□□ -0.34
SSB-207ENST00000465871 PDXDC2PQ6P474 469 aa12.93□□□□□ -0.34
SSB-207ENST00000465871 HMX1Q9NP08 348 aaPredicted RBP12.93□□□□□ -0.34
SSB-207ENST00000465871 NR5A1Q13285 461 aa12.92□□□□□ -0.34
SSB-207ENST00000465871 TRIM47Q96LD4 638 aa12.92□□□□□ -0.34
SSB-207ENST00000465871 CARD14Q9BXL6 1004 aa12.92□□□□□ -0.34
SSB-207ENST00000465871 MAP4K5Q9Y4K4 846 aa12.92□□□□□ -0.34
SSB-207ENST00000465871 BMP1P13497 986 aa12.9□□□□□ -0.34
SSB-207ENST00000465871 TIMP2P16035 220 aa12.9□□□□□ -0.34
SSB-207ENST00000465871 ERFEQ4G0M1 354 aa12.9□□□□□ -0.34
SSB-207ENST00000465871 TMEM259Q4ZIN3 620 aa12.9□□□□□ -0.34
SSB-207ENST00000465871 KIFC2Q96AC6 838 aa12.9□□□□□ -0.34
SSB-207ENST00000465871 ARHGAP9Q9BRR9 750 aa12.9□□□□□ -0.34
SSB-207ENST00000465871 NR3C2P08235 984 aa12.89□□□□□ -0.35
SSB-207ENST00000465871 GRM5P41594 1212 aa12.89□□□□□ -0.35
SSB-207ENST00000465871 WDR4P57081 412 aaKnown RBP12.89□□□□□ -0.35
SSB-207ENST00000465871 PNMA1Q8ND90 353 aa12.89□□□□□ -0.35
SSB-207ENST00000465871 EPS8L1Q8TE68 723 aa12.89□□□□□ -0.35
SSB-207ENST00000465871 TRIM46Q7Z4K8 759 aa12.88□□□□□ -0.35
SSB-207ENST00000465871 KLF16Q9BXK1 252 aaPredicted RBP12.88□□□□□ -0.35
SSB-207ENST00000465871 SNRPBP14678 240 aaKnown RBP12.87□□□□□ -0.35
SSB-207ENST00000465871 FSHRP23945 695 aa12.87□□□□□ -0.35
SSB-207ENST00000465871 VASH1Q7L8A9 365 aaPredicted RBP12.87□□□□□ -0.35
SSB-207ENST00000465871 GPSM3Q9Y4H4 160 aa12.86□□□□□ -0.35
SSB-207ENST00000465871 PTK2Q05397 1052 aa12.85□□□□□ -0.35
SSB-207ENST00000465871 ZIC2O95409 532 aaPredicted RBP12.84□□□□□ -0.35
SSB-207ENST00000465871 ZBTB33Q86T24 672 aa12.84□□□□□ -0.35
SSB-207ENST00000465871 SLC10A4Q96EP9 437 aa12.84□□□□□ -0.35
SSB-207ENST00000465871 ITPKCQ96DU7 683 aa12.83□□□□□ -0.36
SSB-207ENST00000465871 OCSTAMPQ9BR26 566 aa12.83□□□□□ -0.36
SSB-207ENST00000465871 TRIM34Q9BYJ4 488 aa12.83□□□□□ -0.36
SSB-207ENST00000465871 ZFAND3Q9H8U3 227 aa12.82□□□□□ -0.36
SSB-207ENST00000465871 CDV3Q9UKY7 258 aaKnown RBP12.82□□□□□ -0.36
SSB-207ENST00000465871 MRPL14Q6P1L8 145 aaKnown RBP12.81□□□□□ -0.36
SSB-207ENST00000465871 CCDC116Q8IYX3 515 aa12.8□□□□□ -0.36
SSB-207ENST00000465871 ADAM32Q8TC27 787 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms