RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 PPP2R1AP30153 589 aa8.23□□□□□ -1.09
SIK3-207ENST00000465421 DDIT3P35638 169 aa8.23□□□□□ -1.09
SIK3-207ENST00000465421 TMF1P82094 1093 aa8.23□□□□□ -1.09
SIK3-207ENST00000465421 PDE3AQ14432 1141 aa8.23□□□□□ -1.09
SIK3-207ENST00000465421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.23□□□□□ -1.09
SIK3-207ENST00000465421 MYH16Q9H6N6 1097 aa8.23□□□□□ -1.09
SIK3-207ENST00000465421 CCDC146Q8IYE0 955 aa8.22□□□□□ -1.09
SIK3-207ENST00000465421 CLUAP1Q96AJ1 413 aa8.22□□□□□ -1.09
SIK3-207ENST00000465421 CHMP5Q9NZZ3 219 aa8.22□□□□□ -1.09
SIK3-207ENST00000465421 SPATA31D1Q6ZQQ2 1576 aa8.21□□□□□ -1.1
SIK3-207ENST00000465421 KNDC1Q76NI1 1749 aa8.21□□□□□ -1.1
SIK3-207ENST00000465421 CANXP27824 592 aaKnown RBP8.2□□□□□ -1.1
SIK3-207ENST00000465421 TMEM132AQ24JP5 1023 aa8.2□□□□□ -1.1
SIK3-207ENST00000465421 PUS7Q96PZ0 661 aaKnown RBP8.2□□□□□ -1.1
SIK3-207ENST00000465421 GAS2L3Q86XJ1 694 aa8.2□□□□□ -1.1
SIK3-207ENST00000465421 PLCB2Q00722 1185 aa8.2□□□□□ -1.1
SIK3-207ENST00000465421 NEUROD2Q15784 382 aa8.2□□□□□ -1.1
SIK3-207ENST00000465421 CDCA8Q53HL2 280 aa8.2□□□□□ -1.1
SIK3-207ENST00000465421 TULP4Q9NRJ4 1543 aa8.2□□□□□ -1.1
SIK3-207ENST00000465421 DDX11L8A8MPP1 907 aa8.19□□□□□ -1.1
SIK3-207ENST00000465421 WDR43Q15061 677 aaKnown RBP eCLIP8.19□□□□□ -1.1
SIK3-207ENST00000465421 TERF1P54274 439 aa8.19□□□□□ -1.1
SIK3-207ENST00000465421 UPF2Q9HAU5 1272 aaKnown RBP8.19□□□□□ -1.1
SIK3-207ENST00000465421 DLC1Q96QB1 1528 aa8.19□□□□□ -1.1
SIK3-207ENST00000465421 E9PSI1 815 aa8.19□□□□□ -1.1
SIK3-207ENST00000465421 RIPK4P57078 832 aa8.19□□□□□ -1.1
SIK3-207ENST00000465421 DMRT2Q9Y5R5 561 aa8.19□□□□□ -1.1
SIK3-207ENST00000465421 KIF3BO15066 747 aa8.18□□□□□ -1.1
SIK3-207ENST00000465421 KIAA1211Q6ZU35 1233 aa8.18□□□□□ -1.1
SIK3-207ENST00000465421 PPP1R9BQ96SB3 815 aa8.18□□□□□ -1.1
SIK3-207ENST00000465421 OFD1O75665 1012 aa8.17□□□□□ -1.1
SIK3-207ENST00000465421 PANK1Q8TE04 598 aa8.17□□□□□ -1.1
SIK3-207ENST00000465421 ADGRB2O60241 1585 aa8.17□□□□□ -1.1
SIK3-207ENST00000465421 COG6Q9Y2V7 657 aa8.17□□□□□ -1.1
SIK3-207ENST00000465421 PCDHB15Q9Y5E8 787 aa8.17□□□□□ -1.1
SIK3-207ENST00000465421 IQSEC2Q5JU85 1478 aa8.17□□□□□ -1.1
SIK3-207ENST00000465421 KIF20BQ96Q89 1820 aa8.17□□□□□ -1.1
SIK3-207ENST00000465421 YEATS2Q9ULM3 1422 aa8.17□□□□□ -1.1
SIK3-207ENST00000465421 PMFBP1Q8TBY8 1022 aa8.17□□□□□ -1.1
SIK3-207ENST00000465421 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
SIK3-207ENST00000465421 C14orf93Q9H972 538 aaKnown RBP8.16□□□□□ -1.1
SIK3-207ENST00000465421 MED14O60244 1454 aa8.16□□□□□ -1.1
SIK3-207ENST00000465421 ADGRF5Q8IZF2 1346 aa8.16□□□□□ -1.1
SIK3-207ENST00000465421 TRIM44Q96DX7 344 aaPredicted RBP8.16□□□□□ -1.1
SIK3-207ENST00000465421 NRXN3Q9Y4C0 1643 aa8.16□□□□□ -1.1
SIK3-207ENST00000465421 RAPGEF3O95398 923 aa8.16□□□□□ -1.1
SIK3-207ENST00000465421 C22orf23Q9BZE7 217 aa8.16□□□□□ -1.1
SIK3-207ENST00000465421 PTPRMP28827 1452 aa8.15□□□□□ -1.1
SIK3-207ENST00000465421 APAF1O14727 1248 aa8.15□□□□□ -1.1
SIK3-207ENST00000465421 BCL2L13Q9BXK5 485 aa8.15□□□□□ -1.1
SIK3-207ENST00000465421 TNNT2P45379 298 aaPredicted RBP8.15□□□□□ -1.1
SIK3-207ENST00000465421 CCDC173Q0VFZ6 552 aa8.15□□□□□ -1.1
SIK3-207ENST00000465421 NGEFQ8N5V2 710 aa8.15□□□□□ -1.1
SIK3-207ENST00000465421 BCCIPQ9P287 314 aaKnown RBP eCLIP8.15□□□□□ -1.1
SIK3-207ENST00000465421 ZSCAN30Q86W11 494 aa8.15□□□□□ -1.11
SIK3-207ENST00000465421 CDC42BPGQ6DT37 1551 aa8.14□□□□□ -1.11
SIK3-207ENST00000465421 TNPO1Q92973 898 aaKnown RBP8.14□□□□□ -1.11
SIK3-207ENST00000465421 POLR3AO14802 1390 aaPredicted RBP8.14□□□□□ -1.11
SIK3-207ENST00000465421 IBTKQ9P2D0 1353 aaPredicted RBP8.14□□□□□ -1.11
SIK3-207ENST00000465421 RLBP1P12271 317 aa8.14□□□□□ -1.11
SIK3-207ENST00000465421 SMC5Q8IY18 1101 aa8.14□□□□□ -1.11
SIK3-207ENST00000465421 KNSTRNQ9Y448 316 aa8.14□□□□□ -1.11
SIK3-207ENST00000465421 RBM10P98175 930 aaKnown RBP8.13□□□□□ -1.11
SIK3-207ENST00000465421 RAB3GAP1Q15042 981 aa8.13□□□□□ -1.11
SIK3-207ENST00000465421 SNX21Q969T3 373 aa8.13□□□□□ -1.11
SIK3-207ENST00000465421 ARID3AQ99856 593 aa8.13□□□□□ -1.11
SIK3-207ENST00000465421 SENP3Q9H4L4 574 aaPredicted RBP8.13□□□□□ -1.11
SIK3-207ENST00000465421 ALKQ9UM73 1620 aa8.13□□□□□ -1.11
SIK3-207ENST00000465421 NSD2O96028 1365 aa8.13□□□□□ -1.11
SIK3-207ENST00000465421 CFAP65Q6ZU64 1925 aaKnown RBP8.13□□□□□ -1.11
SIK3-207ENST00000465421 SKOR2Q2VWA4 1001 aaPredicted RBP8.13□□□□□ -1.11
SIK3-207ENST00000465421 DHX37Q8IY37 1157 aaKnown RBP8.13□□□□□ -1.11
SIK3-207ENST00000465421 MAP7D2Q96T17 732 aa8.13□□□□□ -1.11
SIK3-207ENST00000465421 RARSP54136 660 aaKnown RBP8.13□□□□□ -1.11
SIK3-207ENST00000465421 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.13□□□□□ -1.11
SIK3-207ENST00000465421 CIZ1Q9ULV3 898 aaPredicted RBP8.13□□□□□ -1.11
SIK3-207ENST00000465421 TRHP20396 242 aaPredicted RBP8.12□□□□□ -1.11
SIK3-207ENST00000465421 RBM25P49756 843 aaKnown RBP8.12□□□□□ -1.11
SIK3-207ENST00000465421 HAP1P54257 671 aaPredicted RBP8.12□□□□□ -1.11
SIK3-207ENST00000465421 SMAP1Q8IYB5 467 aaPredicted RBP8.12□□□□□ -1.11
SIK3-207ENST00000465421 TNNQ9UQP3 1299 aa8.12□□□□□ -1.11
SIK3-207ENST00000465421 RRP7AQ9Y3A4 280 aaKnown RBP8.12□□□□□ -1.11
SIK3-207ENST00000465421 CLEC17AQ6ZS10 378 aa8.12□□□□□ -1.11
SIK3-207ENST00000465421 WWC1Q8IX03 1113 aa8.12□□□□□ -1.11
SIK3-207ENST00000465421 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.12□□□□□ -1.11
SIK3-207ENST00000465421 COL3A1P02461 1466 aaPredicted RBP8.11□□□□□ -1.11
SIK3-207ENST00000465421 HSCBQ8IWL3 235 aa8.11□□□□□ -1.11
SIK3-207ENST00000465421 RWDD1Q9H446 243 aaPredicted RBP8.11□□□□□ -1.11
SIK3-207ENST00000465421 AKAP12Q02952 1782 aa8.11□□□□□ -1.11
SIK3-207ENST00000465421 ZNF500O60304 480 aaPredicted RBP8.11□□□□□ -1.11
SIK3-207ENST00000465421 PTMSP20962 102 aa8.11□□□□□ -1.11
SIK3-207ENST00000465421 HS1BP3Q53T59 392 aa8.11□□□□□ -1.11
SIK3-207ENST00000465421 CFAP70Q5T0N1 1121 aa8.11□□□□□ -1.11
SIK3-207ENST00000465421 FOXD4L1Q9NU39 408 aa8.11□□□□□ -1.11
SIK3-207ENST00000465421 MON2Q7Z3U7 1717 aa8.11□□□□□ -1.11
SIK3-207ENST00000465421 MFAP1P55081 439 aaKnown RBP8.1□□□□□ -1.11
SIK3-207ENST00000465421 PHF23Q9BUL5 403 aaPredicted RBP8.1□□□□□ -1.11
SIK3-207ENST00000465421 FER1L4A9Z1Z3 1794 aa8.1□□□□□ -1.11
SIK3-207ENST00000465421 RIMS1Q86UR5 1692 aaKnown RBP8.1□□□□□ -1.11
SIK3-207ENST00000465421 NASPP49321 788 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms