RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 VPS72Q15906 364 aa31.37■■■□□ 2.61
EDEM1-205ENST00000465187 SIN3AQ96ST3 1273 aa31.37■■■□□ 2.61
EDEM1-205ENST00000465187 PHRF1Q9P1Y6 1649 aaKnown RBP31.37■■■□□ 2.61
EDEM1-205ENST00000465187 QRICH2Q9H0J4 1663 aa31.35■■■□□ 2.61
EDEM1-205ENST00000465187 CCDC9Q9Y3X0 531 aaKnown RBP31.35■■■□□ 2.61
EDEM1-205ENST00000465187 SEPT12Q8IYM1 358 aa31.33■■■□□ 2.61
EDEM1-205ENST00000465187 L3MBTL2Q969R5 705 aa31.33■■■□□ 2.61
EDEM1-205ENST00000465187 NUTM2GQ5VZR2 741 aa31.32■■■□□ 2.6
EDEM1-205ENST00000465187 BTG4Q9NY30 223 aa31.32■■■□□ 2.6
EDEM1-205ENST00000465187 TRPM1Q7Z4N2 1603 aa31.31■■■□□ 2.6
EDEM1-205ENST00000465187 ACEP12821 1306 aa31.29■■■□□ 2.6
EDEM1-205ENST00000465187 POLR3AO14802 1390 aaPredicted RBP31.29■■■□□ 2.6
EDEM1-205ENST00000465187 ONECUT3O60422 494 aaPredicted RBP31.25■■■□□ 2.59
EDEM1-205ENST00000465187 NBPF8Q3BBV2 869 aa31.25■■■□□ 2.59
EDEM1-205ENST00000465187 CENPJQ9HC77 1338 aaPredicted RBP31.24■■■□□ 2.59
EDEM1-205ENST00000465187 NEUROD1Q13562 356 aa31.24■■■□□ 2.59
EDEM1-205ENST00000465187 CHRNA2Q15822 529 aa31.24■■■□□ 2.59
EDEM1-205ENST00000465187 CABP2Q9NPB3 220 aa31.24■■■□□ 2.59
EDEM1-205ENST00000465187 CCDC61Q9Y6R9 512 aa31.24■■■□□ 2.59
EDEM1-205ENST00000465187 KIAA0232Q92628 1395 aa31.23■■■□□ 2.59
EDEM1-205ENST00000465187 FAM98CQ17RN3 349 aaKnown RBP31.23■■■□□ 2.59
EDEM1-205ENST00000465187 NRKQ7Z2Y5 1582 aa31.22■■■□□ 2.59
EDEM1-205ENST00000465187 PLEKHG3A1L390 1219 aa31.22■■■□□ 2.59
EDEM1-205ENST00000465187 PRDM11Q9NQV5 511 aa31.21■■■□□ 2.59
EDEM1-205ENST00000465187 PPIP5K1Q6PFW1 1433 aa31.21■■■□□ 2.59
EDEM1-205ENST00000465187 SRPK2P78362 688 aaKnown RBP31.2■■■□□ 2.59
EDEM1-205ENST00000465187 BLMP54132 1417 aaPredicted RBP31.19■■■□□ 2.58
EDEM1-205ENST00000465187 A0A0G2JS52 829 aa31.19■■■□□ 2.58
EDEM1-205ENST00000465187 ZC3H6P61129 1189 aaKnown RBP31.19■■■□□ 2.58
EDEM1-205ENST00000465187 MYT1Q01538 1121 aa31.19■■■□□ 2.58
EDEM1-205ENST00000465187 DEFB132Q7Z7B7 95 aa31.19■■■□□ 2.58
EDEM1-205ENST00000465187 THSD7AQ9UPZ6 1657 aa31.18■■■□□ 2.58
EDEM1-205ENST00000465187 KRT27Q7Z3Y8 459 aa31.17■■■□□ 2.58
EDEM1-205ENST00000465187 SPATA31A5Q5VU36 1347 aa31.17■■■□□ 2.58
EDEM1-205ENST00000465187 SPATA31A7Q8IWB4 1347 aa31.17■■■□□ 2.58
EDEM1-205ENST00000465187 FAM182BQ5T319 152 aa31.16■■■□□ 2.58
EDEM1-205ENST00000465187 CCDC125Q86Z20 511 aa31.16■■■□□ 2.58
EDEM1-205ENST00000465187 ABTB2Q8N961 1025 aa31.12■■■□□ 2.57
EDEM1-205ENST00000465187 STRN4Q9NRL3 753 aa31.12■■■□□ 2.57
EDEM1-205ENST00000465187 LMO7Q8WWI1 1683 aa31.12■■■□□ 2.57
EDEM1-205ENST00000465187 CAMTA1Q9Y6Y1 1673 aa31.1■■■□□ 2.57
EDEM1-205ENST00000465187 SRCAPQ6ZRS2 3230 aa31.1■■■□□ 2.57
EDEM1-205ENST00000465187 CABP1Q9NZU7 370 aa31.1■■■□□ 2.57
EDEM1-205ENST00000465187 USP19O94966 1318 aa31.09■■■□□ 2.57
EDEM1-205ENST00000465187 ROCK2O75116 1388 aaKnown RBP31.08■■■□□ 2.57
EDEM1-205ENST00000465187 PIK3C2AO00443 1686 aa31.07■■■□□ 2.56
EDEM1-205ENST00000465187 SPATA31A1Q5TZJ5 1347 aa31.07■■■□□ 2.56
EDEM1-205ENST00000465187 ZRANB1Q9UGI0 708 aa31.07■■■□□ 2.56
EDEM1-205ENST00000465187 USP6P35125 1406 aa31.07■■■□□ 2.56
EDEM1-205ENST00000465187 SSH2Q76I76 1423 aa31.04■■■□□ 2.56
EDEM1-205ENST00000465187 AKAP12Q02952 1782 aa31.04■■■□□ 2.56
EDEM1-205ENST00000465187 TNS1Q9HBL0 1735 aaKnown RBP31.04■■■□□ 2.56
EDEM1-205ENST00000465187 USP35Q9P2H5 1018 aa31.03■■■□□ 2.56
EDEM1-205ENST00000465187 RGPD1P0DJD0 1748 aa31.01■■■□□ 2.56
EDEM1-205ENST00000465187 TRIM26Q12899 539 aaPredicted RBP31.01■■■□□ 2.55
EDEM1-205ENST00000465187 CPDO75976 1380 aa31.01■■■□□ 2.55
EDEM1-205ENST00000465187 GCP02774 474 aa31■■■□□ 2.55
EDEM1-205ENST00000465187 LARP1Q6PKG0 1096 aaKnown RBP31■■■□□ 2.55
EDEM1-205ENST00000465187 EVC2Q86UK5 1308 aa30.99■■■□□ 2.55
EDEM1-205ENST00000465187 SF3B2Q13435 895 aaKnown RBP30.99■■■□□ 2.55
EDEM1-205ENST00000465187 SLIT3O75094 1523 aa30.98■■■□□ 2.55
EDEM1-205ENST00000465187 NLRP13Q86W25 1043 aa30.98■■■□□ 2.55
EDEM1-205ENST00000465187 ZBTB7CA1YPR0 619 aa30.96■■■□□ 2.55
EDEM1-205ENST00000465187 COL18A1P39060 1754 aa30.95■■■□□ 2.55
EDEM1-205ENST00000465187 EVA1CP58658 441 aa30.95■■■□□ 2.55
EDEM1-205ENST00000465187 COL5A2P05997 1499 aaPredicted RBP30.95■■■□□ 2.54
EDEM1-205ENST00000465187 NLRP6P59044 892 aa30.94■■■□□ 2.54
EDEM1-205ENST00000465187 RGPD5Q99666 1765 aa30.94■■■□□ 2.54
EDEM1-205ENST00000465187 BRD4O60885 1362 aaPredicted RBP30.92■■■□□ 2.54
EDEM1-205ENST00000465187 EN1Q05925 392 aaPredicted RBP30.91■■■□□ 2.54
EDEM1-205ENST00000465187 MON2Q7Z3U7 1717 aa30.9■■■□□ 2.54
EDEM1-205ENST00000465187 BAG6P46379 1132 aa30.88■■■□□ 2.53
EDEM1-205ENST00000465187 TTC21BQ7Z4L5 1316 aa30.88■■■□□ 2.53
EDEM1-205ENST00000465187 BARGINQ6ZT62 677 aa30.87■■■□□ 2.53
EDEM1-205ENST00000465187 CPSF1Q10570 1443 aaKnown RBP30.87■■■□□ 2.53
EDEM1-205ENST00000465187 PARP4Q9UKK3 1724 aaKnown RBP30.87■■■□□ 2.53
EDEM1-205ENST00000465187 PSDA5PKW4 1024 aaPredicted RBP30.86■■■□□ 2.53
EDEM1-205ENST00000465187 CARD11Q9BXL7 1154 aa30.86■■■□□ 2.53
EDEM1-205ENST00000465187 TRIM37O94972 964 aa30.85■■■□□ 2.53
EDEM1-205ENST00000465187 TCP11L2Q8N4U5 519 aa30.85■■■□□ 2.53
EDEM1-205ENST00000465187 SOX12O15370 315 aa30.84■■■□□ 2.53
EDEM1-205ENST00000465187 AXIN2Q9Y2T1 843 aa30.84■■■□□ 2.53
EDEM1-205ENST00000465187 WNK3Q9BYP7 1800 aa30.84■■■□□ 2.53
EDEM1-205ENST00000465187 CD163L1Q9NR16 1453 aa30.83■■■□□ 2.53
EDEM1-205ENST00000465187 AATKQ6ZMQ8 1374 aa30.83■■■□□ 2.53
EDEM1-205ENST00000465187 TONSLQ96HA7 1378 aa30.83■■■□□ 2.53
EDEM1-205ENST00000465187 LRRC37A3O60309 1634 aa30.82■■■□□ 2.52
EDEM1-205ENST00000465187 NFAT5O94916 1531 aa30.82■■■□□ 2.52
EDEM1-205ENST00000465187 CRB1P82279 1406 aa30.81■■■□□ 2.52
EDEM1-205ENST00000465187 KTN1Q86UP2 1357 aaKnown RBP30.81■■■□□ 2.52
EDEM1-205ENST00000465187 EZH2Q15910 746 aaKnown RBP30.81■■■□□ 2.52
EDEM1-205ENST00000465187 DISP2A7MBM2 1401 aa30.81■■■□□ 2.52
EDEM1-205ENST00000465187 SBNO2Q9Y2G9 1366 aa30.8■■■□□ 2.52
EDEM1-205ENST00000465187 FAM196AQ6ZSG2 479 aa30.78■■■□□ 2.52
EDEM1-205ENST00000465187 ZNF692Q9BU19 519 aaPredicted RBP30.78■■■□□ 2.52
EDEM1-205ENST00000465187 PEAK1Q9H792 1746 aa30.78■■■□□ 2.52
EDEM1-205ENST00000465187 PDE3BQ13370 1112 aa30.77■■■□□ 2.52
EDEM1-205ENST00000465187 RREB1Q92766 1687 aa30.75■■■□□ 2.51
EDEM1-205ENST00000465187 ARHGEF25Q86VW2 580 aa30.75■■■□□ 2.51
EDEM1-205ENST00000465187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms