RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 MED14O60244 1454 aa24.2■■□□□ 1.46
TSPAN4-210ENST00000464987 RGS3P49796 1198 aa24.2■■□□□ 1.46
TSPAN4-210ENST00000464987 DLC1Q96QB1 1528 aa24.18■■□□□ 1.46
TSPAN4-210ENST00000464987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.18■■□□□ 1.46
TSPAN4-210ENST00000464987 RLBP1P12271 317 aa24.18■■□□□ 1.46
TSPAN4-210ENST00000464987 NBR1Q14596 966 aa24.18■■□□□ 1.46
TSPAN4-210ENST00000464987 TSR2Q969E8 191 aaKnown RBP24.16■■□□□ 1.46
TSPAN4-210ENST00000464987 TMPOP42166 694 aaKnown RBP24.16■■□□□ 1.46
TSPAN4-210ENST00000464987 CLUAP1Q96AJ1 413 aa24.16■■□□□ 1.46
TSPAN4-210ENST00000464987 METP08581 1390 aa24.16■■□□□ 1.46
TSPAN4-210ENST00000464987 TRIM35Q9UPQ4 493 aa24.15■■□□□ 1.46
TSPAN4-210ENST00000464987 MAP2P11137 1827 aaKnown RBP24.15■■□□□ 1.46
TSPAN4-210ENST00000464987 ZMYM3Q14202 1370 aa24.15■■□□□ 1.46
TSPAN4-210ENST00000464987 C8orf34Q49A92 452 aa24.15■■□□□ 1.46
TSPAN4-210ENST00000464987 MYH16Q9H6N6 1097 aa24.14■■□□□ 1.45
TSPAN4-210ENST00000464987 NCBP3Q53F19 620 aaKnown RBP24.12■■□□□ 1.45
TSPAN4-210ENST00000464987 DIAPH1O60610 1272 aaKnown RBP24.12■■□□□ 1.45
TSPAN4-210ENST00000464987 TXNDC2Q86VQ3 553 aa24.12■■□□□ 1.45
TSPAN4-210ENST00000464987 PNPLA6Q8IY17 1366 aa24.12■■□□□ 1.45
TSPAN4-210ENST00000464987 NCKAP5LQ9HCH0 1330 aa24.1■■□□□ 1.45
TSPAN4-210ENST00000464987 MAPK8IP3Q9UPT6 1336 aa24.1■■□□□ 1.45
TSPAN4-210ENST00000464987 PPM1GO15355 546 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-210ENST00000464987 FAM161AQ3B820 660 aa24.1■■□□□ 1.45
TSPAN4-210ENST00000464987 ATP7BP35670 1465 aa24.1■■□□□ 1.45
TSPAN4-210ENST00000464987 ESF1Q9H501 851 aaKnown RBP24.09■■□□□ 1.45
TSPAN4-210ENST00000464987 POLKQ9UBT6 870 aa24.08■■□□□ 1.45
TSPAN4-210ENST00000464987 EXOSC9Q06265 439 aaKnown RBP24.08■■□□□ 1.45
TSPAN4-210ENST00000464987 WASLO00401 505 aaPredicted RBP24.07■■□□□ 1.44
TSPAN4-210ENST00000464987 RIPK4P57078 832 aa24.07■■□□□ 1.44
TSPAN4-210ENST00000464987 PCDHB15Q9Y5E8 787 aa24.07■■□□□ 1.44
TSPAN4-210ENST00000464987 ZRANB1Q9UGI0 708 aa24.07■■□□□ 1.44
TSPAN4-210ENST00000464987 PPIP5K1Q6PFW1 1433 aa24.07■■□□□ 1.44
TSPAN4-210ENST00000464987 LRRC7Q96NW7 1537 aa24.06■■□□□ 1.44
TSPAN4-210ENST00000464987 CPSF1Q10570 1443 aaKnown RBP24.05■■□□□ 1.44
TSPAN4-210ENST00000464987 NME9Q86XW9 330 aa24.04■■□□□ 1.44
TSPAN4-210ENST00000464987 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.04■■□□□ 1.44
TSPAN4-210ENST00000464987 VIRMAQ69YN4 1812 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-210ENST00000464987 EMILIN1Q9Y6C2 1016 aa24.03■■□□□ 1.44
TSPAN4-210ENST00000464987 KNDC1Q76NI1 1749 aa24.03■■□□□ 1.44
TSPAN4-210ENST00000464987 UBR1Q8IWV7 1749 aa24.03■■□□□ 1.44
TSPAN4-210ENST00000464987 CDC42BPGQ6DT37 1551 aa24.02■■□□□ 1.44
TSPAN4-210ENST00000464987 TNRQ92752 1358 aa24.01■■□□□ 1.43
TSPAN4-210ENST00000464987 PRKAR2BP31323 418 aa24.01■■□□□ 1.43
TSPAN4-210ENST00000464987 NUDT16Q96DE0 195 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-210ENST00000464987 RSPH6AQ9H0K4 717 aa24.01■■□□□ 1.43
TSPAN4-210ENST00000464987 SSH1Q8WYL5 1049 aa24■■□□□ 1.43
TSPAN4-210ENST00000464987 CPS1P31327 1500 aa24■■□□□ 1.43
TSPAN4-210ENST00000464987 HMOX1P09601 288 aa24■■□□□ 1.43
TSPAN4-210ENST00000464987 ZKSCAN2Q63HK3 967 aa24■■□□□ 1.43
TSPAN4-210ENST00000464987 SMC4Q9NTJ3 1288 aa24■■□□□ 1.43
TSPAN4-210ENST00000464987 LAS1LQ9Y4W2 734 aaKnown RBP24■■□□□ 1.43
TSPAN4-210ENST00000464987 EDC4Q6P2E9 1401 aaKnown RBP24■■□□□ 1.43
TSPAN4-210ENST00000464987 FAM135BQ49AJ0 1406 aa23.99■■□□□ 1.43
TSPAN4-210ENST00000464987 MON2Q7Z3U7 1717 aa23.99■■□□□ 1.43
TSPAN4-210ENST00000464987 FCHSD2O94868 740 aa23.99■■□□□ 1.43
TSPAN4-210ENST00000464987 MVPQ14764 893 aaKnown RBP23.98■■□□□ 1.43
TSPAN4-210ENST00000464987 PHACTR3Q96KR7 559 aa23.98■■□□□ 1.43
TSPAN4-210ENST00000464987 SLC4A3P48751 1232 aa23.97■■□□□ 1.43
TSPAN4-210ENST00000464987 DZIP1LQ8IYY4 767 aaKnown RBP23.97■■□□□ 1.43
TSPAN4-210ENST00000464987 AKAP12Q02952 1782 aa23.97■■□□□ 1.43
TSPAN4-210ENST00000464987 TECPR2O15040 1411 aa23.96■■□□□ 1.43
TSPAN4-210ENST00000464987 CT47B1P0C2W7 299 aaPredicted RBP23.96■■□□□ 1.43
TSPAN4-210ENST00000464987 TRIM27P14373 513 aa23.96■■□□□ 1.43
TSPAN4-210ENST00000464987 IL16Q14005 1332 aa23.96■■□□□ 1.43
TSPAN4-210ENST00000464987 PRR36Q9H6K5 1346 aa23.96■■□□□ 1.43
TSPAN4-210ENST00000464987 TMEM2Q9UHN6 1383 aa23.96■■□□□ 1.43
TSPAN4-210ENST00000464987 FTSJ3Q8IY81 847 aaKnown RBP23.96■■□□□ 1.43
TSPAN4-210ENST00000464987 PMFBP1Q8TBY8 1022 aa23.96■■□□□ 1.43
TSPAN4-210ENST00000464987 ITSN1Q15811 1721 aa23.95■■□□□ 1.42
TSPAN4-210ENST00000464987 ROBO2Q9HCK4 1378 aa23.95■■□□□ 1.42
TSPAN4-210ENST00000464987 PNNQ9H307 717 aaKnown RBP23.95■■□□□ 1.42
TSPAN4-210ENST00000464987 CCDC61Q9Y6R9 512 aa23.95■■□□□ 1.42
TSPAN4-210ENST00000464987 RRS1Q15050 365 aaKnown RBP23.94■■□□□ 1.42
TSPAN4-210ENST00000464987 DDRGK1Q96HY6 314 aa23.94■■□□□ 1.42
TSPAN4-210ENST00000464987 THUMPD2Q9BTF0 503 aaKnown RBP23.94■■□□□ 1.42
TSPAN4-210ENST00000464987 C3P01024 1663 aa23.93■■□□□ 1.42
TSPAN4-210ENST00000464987 DLG5Q8TDM6 1919 aa23.93■■□□□ 1.42
TSPAN4-210ENST00000464987 IL13P35225 146 aa23.93■■□□□ 1.42
TSPAN4-210ENST00000464987 NOB1Q9ULX3 412 aaKnown RBP23.93■■□□□ 1.42
TSPAN4-210ENST00000464987 ADAMTS13Q76LX8 1427 aa23.93■■□□□ 1.42
TSPAN4-210ENST00000464987 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.93■■□□□ 1.42
TSPAN4-210ENST00000464987 AAMPQ13685 434 aa23.92■■□□□ 1.42
TSPAN4-210ENST00000464987 LTKP29376 864 aa23.92■■□□□ 1.42
TSPAN4-210ENST00000464987 CEBPAP49715 358 aaPredicted RBP23.92■■□□□ 1.42
TSPAN4-210ENST00000464987 HDGFP51858 240 aaKnown RBP23.92■■□□□ 1.42
TSPAN4-210ENST00000464987 PDZRN3Q9UPQ7 1066 aa23.92■■□□□ 1.42
TSPAN4-210ENST00000464987 SEC24BO95487 1268 aa23.91■■□□□ 1.42
TSPAN4-210ENST00000464987 SIRT1Q96EB6 747 aa23.91■■□□□ 1.42
TSPAN4-210ENST00000464987 NUTM2FA1L443 756 aa23.9■■□□□ 1.42
TSPAN4-210ENST00000464987 ATF7IPQ6VMQ6 1270 aa23.9■■□□□ 1.42
TSPAN4-210ENST00000464987 CDK12Q9NYV4 1490 aaPredicted RBP23.9■■□□□ 1.42
TSPAN4-210ENST00000464987 COG3Q96JB2 828 aa23.9■■□□□ 1.42
TSPAN4-210ENST00000464987 DEKP35659 375 aaKnown RBP23.89■■□□□ 1.41
TSPAN4-210ENST00000464987 NFE2L2Q16236 605 aa23.88■■□□□ 1.41
TSPAN4-210ENST00000464987 USP19O94966 1318 aa23.88■■□□□ 1.41
TSPAN4-210ENST00000464987 AATKQ6ZMQ8 1374 aa23.88■■□□□ 1.41
TSPAN4-210ENST00000464987 ITPRIPQ8IWB1 547 aa23.88■■□□□ 1.41
TSPAN4-210ENST00000464987 RWDD1Q9H446 243 aaPredicted RBP23.88■■□□□ 1.41
TSPAN4-210ENST00000464987 NEFMP07197 916 aa23.87■■□□□ 1.41
TSPAN4-210ENST00000464987 TMEM57Q8N5G2 664 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms