RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 SLC24A1O60721 1099 aa12.44□□□□□ -0.42
NUDCD3-204ENST00000464812 CDCA8Q53HL2 280 aa12.44□□□□□ -0.42
NUDCD3-204ENST00000464812 SLC12A5Q9H2X9 1139 aa12.44□□□□□ -0.42
NUDCD3-204ENST00000464812 ABCA3Q99758 1704 aa12.44□□□□□ -0.42
NUDCD3-204ENST00000464812 CPSF1Q10570 1443 aaKnown RBP12.44□□□□□ -0.42
NUDCD3-204ENST00000464812 NINLQ9Y2I6 1382 aa12.43□□□□□ -0.42
NUDCD3-204ENST00000464812 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
NUDCD3-204ENST00000464812 PMFBP1Q8TBY8 1022 aa12.43□□□□□ -0.42
NUDCD3-204ENST00000464812 PHF8Q9UPP1 1060 aa12.43□□□□□ -0.42
NUDCD3-204ENST00000464812 ANKRD36BQ8N2N9 1353 aa12.43□□□□□ -0.42
NUDCD3-204ENST00000464812 PIK3C2AO00443 1686 aa12.42□□□□□ -0.42
NUDCD3-204ENST00000464812 POTEAQ6S8J7 498 aa12.42□□□□□ -0.42
NUDCD3-204ENST00000464812 TMC1Q8TDI8 760 aa12.41□□□□□ -0.42
NUDCD3-204ENST00000464812 NSD3Q9BZ95 1437 aa12.41□□□□□ -0.42
NUDCD3-204ENST00000464812 CABP1Q9NZU7 370 aa12.41□□□□□ -0.42
NUDCD3-204ENST00000464812 USP54Q70EL1 1684 aa12.41□□□□□ -0.42
NUDCD3-204ENST00000464812 POLR3AO14802 1390 aaPredicted RBP12.41□□□□□ -0.42
NUDCD3-204ENST00000464812 SPATA31A3Q5VYP0 1347 aa12.4□□□□□ -0.42
NUDCD3-204ENST00000464812 NPHP3Q7Z494 1330 aa12.4□□□□□ -0.42
NUDCD3-204ENST00000464812 LRRC59Q96AG4 307 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-204ENST00000464812 CARD14Q9BXL6 1004 aa12.4□□□□□ -0.42
NUDCD3-204ENST00000464812 PANK3Q9H999 370 aa12.4□□□□□ -0.42
NUDCD3-204ENST00000464812 CCDC61Q9Y6R9 512 aa12.4□□□□□ -0.42
NUDCD3-204ENST00000464812 SPATA31A6Q5VVP1 1343 aa12.39□□□□□ -0.43
NUDCD3-204ENST00000464812 USP6P35125 1406 aa12.39□□□□□ -0.43
NUDCD3-204ENST00000464812 KRT28Q7Z3Y7 464 aa12.39□□□□□ -0.43
NUDCD3-204ENST00000464812 RNF39Q9H2S5 420 aa12.39□□□□□ -0.43
NUDCD3-204ENST00000464812 ACEP12821 1306 aa12.38□□□□□ -0.43
NUDCD3-204ENST00000464812 TNS3Q68CZ2 1445 aa12.38□□□□□ -0.43
NUDCD3-204ENST00000464812 SSH2Q76I76 1423 aa12.38□□□□□ -0.43
NUDCD3-204ENST00000464812 PLEKHG3A1L390 1219 aa12.38□□□□□ -0.43
NUDCD3-204ENST00000464812 PER1O15534 1290 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-204ENST00000464812 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
NUDCD3-204ENST00000464812 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
NUDCD3-204ENST00000464812 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
NUDCD3-204ENST00000464812 SBNO1A3KN83 1393 aa12.37□□□□□ -0.43
NUDCD3-204ENST00000464812 KTN1Q86UP2 1357 aaKnown RBP12.37□□□□□ -0.43
NUDCD3-204ENST00000464812 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
NUDCD3-204ENST00000464812 DIEXFQ68CQ4 756 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-204ENST00000464812 CABLES1Q8TDN4 633 aa12.36□□□□□ -0.43
NUDCD3-204ENST00000464812 AMER1Q5JTC6 1135 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-204ENST00000464812 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
NUDCD3-204ENST00000464812 PHRF1Q9P1Y6 1649 aaKnown RBP12.33□□□□□ -0.43
NUDCD3-204ENST00000464812 HDGFL2Q7Z4V5 671 aaPredicted RBP12.33□□□□□ -0.44
NUDCD3-204ENST00000464812 TERF2IPQ9NYB0 399 aa12.33□□□□□ -0.44
NUDCD3-204ENST00000464812 OVOS2A0A0J9YW53 1432 aa12.32□□□□□ -0.44
NUDCD3-204ENST00000464812 OVOS2Q6IE36 1432 aa12.32□□□□□ -0.44
NUDCD3-204ENST00000464812 ADAMTS2O95450 1211 aa12.32□□□□□ -0.44
NUDCD3-204ENST00000464812 NGDNQ8NEJ9 315 aaKnown RBP12.32□□□□□ -0.44
NUDCD3-204ENST00000464812 CNKSR2Q8WXI2 1034 aa12.32□□□□□ -0.44
NUDCD3-204ENST00000464812 AFF2P51816 1311 aa12.32□□□□□ -0.44
NUDCD3-204ENST00000464812 SLIT2O94813 1529 aa12.32□□□□□ -0.44
NUDCD3-204ENST00000464812 NPC1L1Q9UHC9 1359 aa12.31□□□□□ -0.44
NUDCD3-204ENST00000464812 PSME1Q06323 249 aa12.31□□□□□ -0.44
NUDCD3-204ENST00000464812 TTC21BQ7Z4L5 1316 aa12.31□□□□□ -0.44
NUDCD3-204ENST00000464812 NRAPQ86VF7 1730 aa12.31□□□□□ -0.44
NUDCD3-204ENST00000464812 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
NUDCD3-204ENST00000464812 PLCH1Q4KWH8 1693 aa12.3□□□□□ -0.44
NUDCD3-204ENST00000464812 CNGB1Q14028 1251 aaPredicted RBP12.3□□□□□ -0.44
NUDCD3-204ENST00000464812 NME9Q86XW9 330 aa12.3□□□□□ -0.44
NUDCD3-204ENST00000464812 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.3□□□□□ -0.443e-6■■□□□ 14.4
NUDCD3-204ENST00000464812 FNBP4Q8N3X1 1017 aaPredicted RBP12.3□□□□□ -0.44
NUDCD3-204ENST00000464812 C8orf37Q96NL8 207 aa12.3□□□□□ -0.44
NUDCD3-204ENST00000464812 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
NUDCD3-204ENST00000464812 LTN1O94822 1766 aa12.3□□□□□ -0.44
NUDCD3-204ENST00000464812 MAP2P11137 1827 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-204ENST00000464812 PEAK1Q9H792 1746 aa12.29□□□□□ -0.44
NUDCD3-204ENST00000464812 SLIT3O75094 1523 aa12.29□□□□□ -0.44
NUDCD3-204ENST00000464812 CC2D1BQ5T0F9 858 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-204ENST00000464812 KNSTRNQ9Y448 316 aa12.29□□□□□ -0.44
NUDCD3-204ENST00000464812 NSD2O96028 1365 aa12.29□□□□□ -0.44
NUDCD3-204ENST00000464812 GLI3P10071 1580 aa12.28□□□□□ -0.44
NUDCD3-204ENST00000464812 FYB1O15117 783 aa12.28□□□□□ -0.44
NUDCD3-204ENST00000464812 PLEKHG5O94827 1062 aa12.28□□□□□ -0.44
NUDCD3-204ENST00000464812 NUTM2GQ5VZR2 741 aa12.28□□□□□ -0.44
NUDCD3-204ENST00000464812 ZNF692Q9BU19 519 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-204ENST00000464812 CGNL1Q0VF96 1302 aa12.28□□□□□ -0.44
NUDCD3-204ENST00000464812 BRD4O60885 1362 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-204ENST00000464812 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-204ENST00000464812 ATRNO75882 1429 aa12.28□□□□□ -0.44
NUDCD3-204ENST00000464812 NFAT5O94916 1531 aa12.27□□□□□ -0.44
NUDCD3-204ENST00000464812 GGNBP2Q9H3C7 697 aa12.27□□□□□ -0.45
NUDCD3-204ENST00000464812 PRKRIP1Q9H875 184 aaPredicted RBP12.27□□□□□ -0.45
NUDCD3-204ENST00000464812 RNF216Q9NWF9 866 aaPredicted RBP12.27□□□□□ -0.45
NUDCD3-204ENST00000464812 USP19O94966 1318 aa12.27□□□□□ -0.45
NUDCD3-204ENST00000464812 TTC21AQ8NDW8 1320 aa12.27□□□□□ -0.45
NUDCD3-204ENST00000464812 ARHGEF10O15013 1369 aa12.27□□□□□ -0.45
NUDCD3-204ENST00000464812 LMO7Q8WWI1 1683 aa12.26□□□□□ -0.45
NUDCD3-204ENST00000464812 FAM83GA6ND36 823 aa12.26□□□□□ -0.45
NUDCD3-204ENST00000464812 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
NUDCD3-204ENST00000464812 COL18A1P39060 1754 aa12.25□□□□□ -0.45
NUDCD3-204ENST00000464812 MEX3CQ5U5Q3 659 aaKnown RBP12.25□□□□□ -0.45
NUDCD3-204ENST00000464812 MIER1Q8N108 512 aa12.25□□□□□ -0.45
NUDCD3-204ENST00000464812 RGS12O14924 1447 aa12.25□□□□□ -0.45
NUDCD3-204ENST00000464812 NWD2Q9ULI1 1742 aa12.25□□□□□ -0.45
NUDCD3-204ENST00000464812 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
NUDCD3-204ENST00000464812 LMOD2Q6P5Q4 547 aa12.24□□□□□ -0.45
NUDCD3-204ENST00000464812 NGLY1Q96IV0 654 aa12.24□□□□□ -0.45
NUDCD3-204ENST00000464812 RGPD5Q99666 1765 aa12.24□□□□□ -0.45
NUDCD3-204ENST00000464812 COL14A1Q05707 1796 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms