RNA–Protein interactions for RNA: ENST00000464699.5

KRTCAP3-205, Transcript of keratinocyte associated protein 3, humanhuman

TSL 3

Gene KRTCAP3, Length 724 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-205ENST00000464699 FNBP4Q8N3X1 1017 aaPredicted RBP35.7■■■■□ 3.31
KRTCAP3-205ENST00000464699 ALS2Q96Q42 1657 aa35.7■■■■□ 3.31
KRTCAP3-205ENST00000464699 MARF1Q9Y4F3 1742 aaKnown RBP35.69■■■■□ 3.3
KRTCAP3-205ENST00000464699 ATRNO75882 1429 aa35.69■■■■□ 3.3
KRTCAP3-205ENST00000464699 PLEKHG5O94827 1062 aa35.69■■■■□ 3.3
KRTCAP3-205ENST00000464699 USP21Q9UK80 565 aa35.69■■■■□ 3.3
KRTCAP3-205ENST00000464699 ATAD2Q6PL18 1390 aa35.68■■■■□ 3.3
KRTCAP3-205ENST00000464699 CABLES1Q8TDN4 633 aa35.68■■■■□ 3.3
KRTCAP3-205ENST00000464699 TRPC5Q9UL62 973 aaPredicted RBP35.68■■■■□ 3.3
KRTCAP3-205ENST00000464699 ST20-MTHFSA0A0A6YYL1 179 aa35.67■■■■□ 3.3
KRTCAP3-205ENST00000464699 HAP1P54257 671 aaPredicted RBP35.66■■■■□ 3.3
KRTCAP3-205ENST00000464699 USP47Q96K76 1375 aa35.62■■■■□ 3.29
KRTCAP3-205ENST00000464699 TESK2Q96S53 571 aa35.61■■■■□ 3.29
KRTCAP3-205ENST00000464699 ABCA3Q99758 1704 aa35.6■■■■□ 3.29
KRTCAP3-205ENST00000464699 BCL9LQ86UU0 1499 aa35.58■■■■□ 3.29
KRTCAP3-205ENST00000464699 SLC24A1O60721 1099 aa35.57■■■■□ 3.28
KRTCAP3-205ENST00000464699 BRD4O60885 1362 aaPredicted RBP35.54■■■■□ 3.28
KRTCAP3-205ENST00000464699 ABTB2Q8N961 1025 aa35.54■■■■□ 3.28
KRTCAP3-205ENST00000464699 USP6P35125 1406 aa35.53■■■■□ 3.28
KRTCAP3-205ENST00000464699 NUTM2GQ5VZR2 741 aa35.53■■■■□ 3.28
KRTCAP3-205ENST00000464699 PUS7Q96PZ0 661 aaKnown RBP35.53■■■■□ 3.28
KRTCAP3-205ENST00000464699 ZNF692Q9BU19 519 aaPredicted RBP35.53■■■■□ 3.28
KRTCAP3-205ENST00000464699 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.53■■■■□ 3.28
KRTCAP3-205ENST00000464699 AKAP12Q02952 1782 aa35.52■■■■□ 3.28
KRTCAP3-205ENST00000464699 CRYBG1Q9Y4K1 1723 aa35.51■■■■□ 3.27
KRTCAP3-205ENST00000464699 EP400Q96L91 3159 aa35.49■■■■□ 3.27
KRTCAP3-205ENST00000464699 TMC1Q8TDI8 760 aa35.49■■■■□ 3.27
KRTCAP3-205ENST00000464699 CPSF1Q10570 1443 aaKnown RBP35.46■■■■□ 3.27
KRTCAP3-205ENST00000464699 TMF1P82094 1093 aa35.45■■■■□ 3.27
KRTCAP3-205ENST00000464699 SLC12A5Q9H2X9 1139 aa35.45■■■■□ 3.27
KRTCAP3-205ENST00000464699 SSH2Q76I76 1423 aa35.45■■■■□ 3.27
KRTCAP3-205ENST00000464699 SLIT2O94813 1529 aa35.45■■■■□ 3.27
KRTCAP3-205ENST00000464699 SRCAPQ6ZRS2 3230 aa35.44■■■■□ 3.26
KRTCAP3-205ENST00000464699 FAM83GA6ND36 823 aa35.44■■■■□ 3.26
KRTCAP3-205ENST00000464699 NLRP13Q86W25 1043 aa35.44■■■■□ 3.26
KRTCAP3-205ENST00000464699 KTN1Q86UP2 1357 aaKnown RBP35.43■■■■□ 3.26
KRTCAP3-205ENST00000464699 PHRF1Q9P1Y6 1649 aaKnown RBP35.43■■■■□ 3.26
KRTCAP3-205ENST00000464699 UNC5CLQ8IV45 518 aa35.42■■■■□ 3.26
KRTCAP3-205ENST00000464699 GJD4Q96KN9 370 aaPredicted RBP35.42■■■■□ 3.26
KRTCAP3-205ENST00000464699 TTC21BQ7Z4L5 1316 aa35.41■■■■□ 3.26
KRTCAP3-205ENST00000464699 PLCH1Q4KWH8 1693 aa35.41■■■■□ 3.26
KRTCAP3-205ENST00000464699 GLI3P10071 1580 aa35.41■■■■□ 3.26
KRTCAP3-205ENST00000464699 NLRP6P59044 892 aa35.39■■■■□ 3.26
KRTCAP3-205ENST00000464699 HDGFL2Q7Z4V5 671 aaPredicted RBP35.39■■■■□ 3.26
KRTCAP3-205ENST00000464699 CCDC125Q86Z20 511 aa35.39■■■■□ 3.26
KRTCAP3-205ENST00000464699 MON2Q7Z3U7 1717 aa35.39■■■■□ 3.26
KRTCAP3-205ENST00000464699 NWD2Q9ULI1 1742 aa35.39■■■■□ 3.26
KRTCAP3-205ENST00000464699 CD163L1Q9NR16 1453 aa35.38■■■■□ 3.25
KRTCAP3-205ENST00000464699 USP19O94966 1318 aa35.37■■■■□ 3.25
KRTCAP3-205ENST00000464699 PRDM11Q9NQV5 511 aa35.37■■■■□ 3.25
KRTCAP3-205ENST00000464699 TERF2IPQ9NYB0 399 aa35.37■■■■□ 3.25
KRTCAP3-205ENST00000464699 COL14A1Q05707 1796 aaKnown RBP35.37■■■■□ 3.25
KRTCAP3-205ENST00000464699 TTC21AQ8NDW8 1320 aa35.36■■■■□ 3.25
KRTCAP3-205ENST00000464699 ZC3H6P61129 1189 aaKnown RBP35.36■■■■□ 3.25
KRTCAP3-205ENST00000464699 PIK3C2AO00443 1686 aa35.36■■■■□ 3.25
KRTCAP3-205ENST00000464699 NRKQ7Z2Y5 1582 aa35.34■■■■□ 3.25
KRTCAP3-205ENST00000464699 EIF4G2P78344 907 aaKnown RBP eCLIP35.34■■■■□ 3.25
KRTCAP3-205ENST00000464699 CDCA8Q53HL2 280 aa35.34■■■■□ 3.25
KRTCAP3-205ENST00000464699 ZRANB1Q9UGI0 708 aa35.34■■■■□ 3.25
KRTCAP3-205ENST00000464699 KIAA0232Q92628 1395 aa35.34■■■■□ 3.25
KRTCAP3-205ENST00000464699 NINLQ9Y2I6 1382 aa35.34■■■■□ 3.25
KRTCAP3-205ENST00000464699 GCP02774 474 aa35.32■■■■□ 3.24
KRTCAP3-205ENST00000464699 BTG4Q9NY30 223 aa35.32■■■■□ 3.24
KRTCAP3-205ENST00000464699 A0A1W2PP64 1363 aa35.3■■■■□ 3.24
KRTCAP3-205ENST00000464699 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.3■■■■□ 3.24
KRTCAP3-205ENST00000464699 CHRNA2Q15822 529 aa35.29■■■■□ 3.24
KRTCAP3-205ENST00000464699 HSPA5P11021 654 aaKnown RBP35.28■■■■□ 3.24
KRTCAP3-205ENST00000464699 VPS72Q15906 364 aa35.28■■■■□ 3.24
KRTCAP3-205ENST00000464699 BRWD3Q6RI45 1802 aa35.27■■■■□ 3.24
KRTCAP3-205ENST00000464699 NRAPQ86VF7 1730 aa35.27■■■■□ 3.24
KRTCAP3-205ENST00000464699 BLMP54132 1417 aaPredicted RBP35.26■■■■□ 3.24
KRTCAP3-205ENST00000464699 SLIT3O75094 1523 aa35.26■■■■□ 3.23
KRTCAP3-205ENST00000464699 EDC4Q6P2E9 1401 aaKnown RBP35.25■■■■□ 3.23
KRTCAP3-205ENST00000464699 CCDC9Q9Y3X0 531 aaKnown RBP35.25■■■■□ 3.23
KRTCAP3-205ENST00000464699 CPDO75976 1380 aa35.25■■■■□ 3.23
KRTCAP3-205ENST00000464699 NME9Q86XW9 330 aa35.22■■■■□ 3.23
KRTCAP3-205ENST00000464699 ANKRD36BQ8N2N9 1353 aa35.2■■■■□ 3.23
KRTCAP3-205ENST00000464699 USP31Q70CQ4 1352 aa35.19■■■■□ 3.22
KRTCAP3-205ENST00000464699 KCNH5Q8NCM2 988 aa35.19■■■■□ 3.22
KRTCAP3-205ENST00000464699 ZBTB7CA1YPR0 619 aa35.18■■■■□ 3.22
KRTCAP3-205ENST00000464699 SOX12O15370 315 aa35.16■■■■□ 3.22
KRTCAP3-205ENST00000464699 STRN4Q9NRL3 753 aa35.15■■■■□ 3.22
KRTCAP3-205ENST00000464699 USP54Q70EL1 1684 aa35.14■■■■□ 3.22
KRTCAP3-205ENST00000464699 CAMTA1Q9Y6Y1 1673 aa35.14■■■■□ 3.22
KRTCAP3-205ENST00000464699 EVA1CP58658 441 aa35.14■■■■□ 3.22
KRTCAP3-205ENST00000464699 LMO7Q8WWI1 1683 aa35.14■■■■□ 3.22
KRTCAP3-205ENST00000464699 SEPT12Q8IYM1 358 aa35.13■■■■□ 3.21
KRTCAP3-205ENST00000464699 POLR3GLQ9BT43 218 aa35.13■■■■□ 3.21
KRTCAP3-205ENST00000464699 MYOM1P52179 1685 aa35.13■■■■□ 3.21
KRTCAP3-205ENST00000464699 ONECUT3O60422 494 aaPredicted RBP35.12■■■■□ 3.21
KRTCAP3-205ENST00000464699 SPATA31A5Q5VU36 1347 aa35.1■■■■□ 3.21
KRTCAP3-205ENST00000464699 SPATA31A7Q8IWB4 1347 aa35.1■■■■□ 3.21
KRTCAP3-205ENST00000464699 ARHGEF25Q86VW2 580 aa35.1■■■■□ 3.21
KRTCAP3-205ENST00000464699 AATKQ6ZMQ8 1374 aa35.1■■■■□ 3.21
KRTCAP3-205ENST00000464699 NFAT5O94916 1531 aa35.08■■■■□ 3.21
KRTCAP3-205ENST00000464699 COL18A1P39060 1754 aa35.08■■■■□ 3.21
KRTCAP3-205ENST00000464699 DEFB132Q7Z7B7 95 aa35.07■■■■□ 3.2
KRTCAP3-205ENST00000464699 FAM98CQ17RN3 349 aaKnown RBP35.05■■■■□ 3.2
KRTCAP3-205ENST00000464699 OVOS2A0A0J9YW53 1432 aa35.05■■■■□ 3.2
KRTCAP3-205ENST00000464699 OVOS2Q6IE36 1432 aa35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms