RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 VPS72Q15906 364 aa18.99■□□□□ 0.63
COMMD3-205ENST00000463688 ABTB2Q8N961 1025 aa18.99■□□□□ 0.63
COMMD3-205ENST00000463688 CCDC125Q86Z20 511 aa18.98■□□□□ 0.63
COMMD3-205ENST00000463688 CABP2Q9NPB3 220 aa18.98■□□□□ 0.63
COMMD3-205ENST00000463688 PPIP5K1Q6PFW1 1433 aa18.97■□□□□ 0.63
COMMD3-205ENST00000463688 USP32Q8NFA0 1604 aa18.97■□□□□ 0.63
COMMD3-205ENST00000463688 CABLES1Q8TDN4 633 aa18.97■□□□□ 0.63
COMMD3-205ENST00000463688 PRDM11Q9NQV5 511 aa18.97■□□□□ 0.63
COMMD3-205ENST00000463688 BCL9LQ86UU0 1499 aa18.96■□□□□ 0.63
COMMD3-205ENST00000463688 SLIT2O94813 1529 aa18.96■□□□□ 0.63
COMMD3-205ENST00000463688 CABP1Q9NZU7 370 aa18.96■□□□□ 0.63
COMMD3-205ENST00000463688 CCDC9Q9Y3X0 531 aaKnown RBP18.96■□□□□ 0.63
COMMD3-205ENST00000463688 FAM83GA6ND36 823 aa18.94■□□□□ 0.62
COMMD3-205ENST00000463688 RALGAPBQ86X10 1494 aa18.94■□□□□ 0.62
COMMD3-205ENST00000463688 TRPM1Q7Z4N2 1603 aa18.93■□□□□ 0.62
COMMD3-205ENST00000463688 PLEKHG5O94827 1062 aa18.92■□□□□ 0.62
COMMD3-205ENST00000463688 UPF1Q92900 1129 aaKnown RBP eCLIP18.92■□□□□ 0.62
COMMD3-205ENST00000463688 RGPD8O14715 1765 aaPredicted RBP18.92■□□□□ 0.62
COMMD3-205ENST00000463688 CDCA8Q53HL2 280 aa18.91■□□□□ 0.62
COMMD3-205ENST00000463688 BTG4Q9NY30 223 aa18.91■□□□□ 0.62
COMMD3-205ENST00000463688 RGS12O14924 1447 aa18.91■□□□□ 0.62
COMMD3-205ENST00000463688 TTC21AQ8NDW8 1320 aa18.91■□□□□ 0.62
COMMD3-205ENST00000463688 KCNH5Q8NCM2 988 aa18.91■□□□□ 0.62
COMMD3-205ENST00000463688 ONECUT3O60422 494 aaPredicted RBP18.9■□□□□ 0.62
COMMD3-205ENST00000463688 EVA1CP58658 441 aa18.9■□□□□ 0.62
COMMD3-205ENST00000463688 HDGFL2Q7Z4V5 671 aaPredicted RBP18.9■□□□□ 0.62
COMMD3-205ENST00000463688 TERF2IPQ9NYB0 399 aa18.9■□□□□ 0.62
COMMD3-205ENST00000463688 NINLQ9Y2I6 1382 aa18.89■□□□□ 0.61
COMMD3-205ENST00000463688 NLRP6P59044 892 aa18.89■□□□□ 0.61
COMMD3-205ENST00000463688 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
COMMD3-205ENST00000463688 USP6P35125 1406 aa18.88■□□□□ 0.61
COMMD3-205ENST00000463688 CPDO75976 1380 aa18.87■□□□□ 0.61
COMMD3-205ENST00000463688 MARF1Q9Y4F3 1742 aaKnown RBP18.87■□□□□ 0.61
COMMD3-205ENST00000463688 QRICH2Q9H0J4 1663 aa18.87■□□□□ 0.61
COMMD3-205ENST00000463688 GCP02774 474 aa18.87■□□□□ 0.61
COMMD3-205ENST00000463688 TRPM3Q9HCF6 1732 aaPredicted RBP18.87■□□□□ 0.61
COMMD3-205ENST00000463688 USP19O94966 1318 aa18.86■□□□□ 0.61
COMMD3-205ENST00000463688 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.86■□□□□ 0.61
COMMD3-205ENST00000463688 NWD2Q9ULI1 1742 aa18.85■□□□□ 0.61
COMMD3-205ENST00000463688 A0A0G2JS52 829 aa18.85■□□□□ 0.61
COMMD3-205ENST00000463688 MYT1Q01538 1121 aa18.85■□□□□ 0.61
COMMD3-205ENST00000463688 SF3B2Q13435 895 aaKnown RBP18.85■□□□□ 0.61
COMMD3-205ENST00000463688 SEPT12Q8IYM1 358 aa18.85■□□□□ 0.61
COMMD3-205ENST00000463688 ALS2Q96Q42 1657 aa18.85■□□□□ 0.61
COMMD3-205ENST00000463688 KIAA0232Q92628 1395 aa18.85■□□□□ 0.61
COMMD3-205ENST00000463688 ZC3H6P61129 1189 aaKnown RBP18.84■□□□□ 0.61
COMMD3-205ENST00000463688 TMF1P82094 1093 aa18.84■□□□□ 0.61
COMMD3-205ENST00000463688 TMC1Q8TDI8 760 aa18.84■□□□□ 0.61
COMMD3-205ENST00000463688 TOPAZ1Q8N9V7 1692 aa18.84■□□□□ 0.61
COMMD3-205ENST00000463688 C11orf95C9JLR9 678 aaPredicted RBP18.83■□□□□ 0.61
COMMD3-205ENST00000463688 NUTM2GQ5VZR2 741 aa18.83■□□□□ 0.61
COMMD3-205ENST00000463688 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.61
COMMD3-205ENST00000463688 COL14A1Q05707 1796 aaKnown RBP18.83■□□□□ 0.61
COMMD3-205ENST00000463688 KRT27Q7Z3Y8 459 aa18.83■□□□□ 0.6
COMMD3-205ENST00000463688 THRAP3Q9Y2W1 955 aaKnown RBP18.83■□□□□ 0.6
COMMD3-205ENST00000463688 SPATA31A5Q5VU36 1347 aa18.82■□□□□ 0.6
COMMD3-205ENST00000463688 TTC21BQ7Z4L5 1316 aa18.82■□□□□ 0.6
COMMD3-205ENST00000463688 SPATA31A7Q8IWB4 1347 aa18.82■□□□□ 0.6
COMMD3-205ENST00000463688 CCER1Q8TC90 406 aaPredicted RBP18.82■□□□□ 0.6
COMMD3-205ENST00000463688 ST20-MTHFSA0A0A6YYL1 179 aa18.81■□□□□ 0.6
COMMD3-205ENST00000463688 STRN4Q9NRL3 753 aa18.8■□□□□ 0.6
COMMD3-205ENST00000463688 CPSF1Q10570 1443 aaKnown RBP18.79■□□□□ 0.6
COMMD3-205ENST00000463688 AATKQ6ZMQ8 1374 aa18.78■□□□□ 0.6
COMMD3-205ENST00000463688 SSH2Q76I76 1423 aa18.78■□□□□ 0.6
COMMD3-205ENST00000463688 CHRNA2Q15822 529 aa18.78■□□□□ 0.6
COMMD3-205ENST00000463688 FAM98CQ17RN3 349 aaKnown RBP18.78■□□□□ 0.6
COMMD3-205ENST00000463688 BARGINQ6ZT62 677 aa18.78■□□□□ 0.6
COMMD3-205ENST00000463688 SPATA31A1Q5TZJ5 1347 aa18.77■□□□□ 0.6
COMMD3-205ENST00000463688 PIAS4Q8N2W9 510 aaPredicted RBP18.76■□□□□ 0.59
COMMD3-205ENST00000463688 TCP11L2Q8N4U5 519 aa18.76■□□□□ 0.59
COMMD3-205ENST00000463688 CDCA7Q9BWT1 371 aaPredicted RBP18.76■□□□□ 0.59
COMMD3-205ENST00000463688 USP47Q96K76 1375 aa18.76■□□□□ 0.59
COMMD3-205ENST00000463688 TESK2Q96S53 571 aa18.75■□□□□ 0.59
COMMD3-205ENST00000463688 ABCA3Q99758 1704 aa18.75■□□□□ 0.59
COMMD3-205ENST00000463688 BLMP54132 1417 aaPredicted RBP18.74■□□□□ 0.59
COMMD3-205ENST00000463688 EDC4Q6P2E9 1401 aaKnown RBP18.74■□□□□ 0.59
COMMD3-205ENST00000463688 PLCH1Q4KWH8 1693 aa18.74■□□□□ 0.59
COMMD3-205ENST00000463688 PDE3BQ13370 1112 aa18.74■□□□□ 0.59
COMMD3-205ENST00000463688 SLC12A5Q9H2X9 1139 aa18.74■□□□□ 0.59
COMMD3-205ENST00000463688 USP31Q70CQ4 1352 aa18.73■□□□□ 0.59
COMMD3-205ENST00000463688 FAM196AQ6ZSG2 479 aa18.73■□□□□ 0.59
COMMD3-205ENST00000463688 GLI3P10071 1580 aa18.72■□□□□ 0.59
COMMD3-205ENST00000463688 ARHGEF25Q86VW2 580 aa18.72■□□□□ 0.59
COMMD3-205ENST00000463688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.72■□□□□ 0.59
COMMD3-205ENST00000463688 ZBTB7CA1YPR0 619 aa18.71■□□□□ 0.59
COMMD3-205ENST00000463688 ZRANB1Q9UGI0 708 aa18.71■□□□□ 0.59
COMMD3-205ENST00000463688 BAG6P46379 1132 aa18.7■□□□□ 0.58
COMMD3-205ENST00000463688 TOM1L2Q6ZVM7 507 aa18.7■□□□□ 0.58
COMMD3-205ENST00000463688 SLIT3O75094 1523 aa18.69■□□□□ 0.58
COMMD3-205ENST00000463688 CSB-PGBD3P0DP91 1061 aa18.69■□□□□ 0.58
COMMD3-205ENST00000463688 COG3Q96JB2 828 aa18.69■□□□□ 0.58
COMMD3-205ENST00000463688 USP35Q9P2H5 1018 aa18.69■□□□□ 0.58
COMMD3-205ENST00000463688 CRB1P82279 1406 aa18.68■□□□□ 0.58
COMMD3-205ENST00000463688 LARP1Q6PKG0 1096 aaKnown RBP18.68■□□□□ 0.58
COMMD3-205ENST00000463688 PHRF1Q9P1Y6 1649 aaKnown RBP18.68■□□□□ 0.58
COMMD3-205ENST00000463688 NRKQ7Z2Y5 1582 aa18.68■□□□□ 0.58
COMMD3-205ENST00000463688 EIF4G2P78344 907 aaKnown RBP eCLIP18.67■□□□□ 0.58
COMMD3-205ENST00000463688 ANKRD36BQ8N2N9 1353 aa18.67■□□□□ 0.58
COMMD3-205ENST00000463688 WDR17Q8IZU2 1322 aa18.67■□□□□ 0.58
COMMD3-205ENST00000463688 CRYBG1Q9Y4K1 1723 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms