RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 CASZ1Q86V15 1759 aa16.68■□□□□ 0.26
SSR3-202ENST00000463503 SBF2Q86WG5 1849 aa16.68■□□□□ 0.26
SSR3-202ENST00000463503 PARD3Q8TEW0 1356 aa16.67■□□□□ 0.26
SSR3-202ENST00000463503 SIRT1Q96EB6 747 aa16.66■□□□□ 0.26
SSR3-202ENST00000463503 CAMKK2Q96RR4 588 aa16.66■□□□□ 0.26
SSR3-202ENST00000463503 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
SSR3-202ENST00000463503 PARP4Q9UKK3 1724 aaKnown RBP16.66■□□□□ 0.26
SSR3-202ENST00000463503 TULP4Q9NRJ4 1543 aa16.65■□□□□ 0.26
SSR3-202ENST00000463503 ADGRB1O14514 1584 aa16.65■□□□□ 0.26
SSR3-202ENST00000463503 YY1P25490 414 aa16.65■□□□□ 0.26
SSR3-202ENST00000463503 LMOD2Q6P5Q4 547 aa16.65■□□□□ 0.26
SSR3-202ENST00000463503 LMO7Q8WWI1 1683 aa16.64■□□□□ 0.25
SSR3-202ENST00000463503 PEAK1Q9H792 1746 aa16.64■□□□□ 0.25
SSR3-202ENST00000463503 TOPAZ1Q8N9V7 1692 aa16.63■□□□□ 0.25
SSR3-202ENST00000463503 NRKQ7Z2Y5 1582 aa16.63■□□□□ 0.25
SSR3-202ENST00000463503 WNK3Q9BYP7 1800 aa16.62■□□□□ 0.25
SSR3-202ENST00000463503 ARHGEF28Q8N1W1 1705 aaKnown RBP16.62■□□□□ 0.25
SSR3-202ENST00000463503 CHD4Q14839 1912 aa16.61■□□□□ 0.25
SSR3-202ENST00000463503 RGL3Q3MIN7 710 aa16.61■□□□□ 0.25
SSR3-202ENST00000463503 PMFBP1Q8TBY8 1022 aa16.61■□□□□ 0.25
SSR3-202ENST00000463503 MYOM1P52179 1685 aa16.6■□□□□ 0.25
SSR3-202ENST00000463503 SPATA31A1Q5TZJ5 1347 aa16.6■□□□□ 0.25
SSR3-202ENST00000463503 TRIM37O94972 964 aa16.59■□□□□ 0.25
SSR3-202ENST00000463503 PRAM1Q96QH2 718 aa16.59■□□□□ 0.25
SSR3-202ENST00000463503 C14orf93Q9H972 538 aaKnown RBP16.59■□□□□ 0.25
SSR3-202ENST00000463503 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
SSR3-202ENST00000463503 PRR36Q9H6K5 1346 aa16.58■□□□□ 0.24
SSR3-202ENST00000463503 NINLQ9Y2I6 1382 aa16.58■□□□□ 0.24
SSR3-202ENST00000463503 LRRC37A3O60309 1634 aa16.57■□□□□ 0.24
SSR3-202ENST00000463503 DHX57Q6P158 1386 aaKnown RBP16.57■□□□□ 0.24
SSR3-202ENST00000463503 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
SSR3-202ENST00000463503 FAM196AQ6ZSG2 479 aa16.57■□□□□ 0.24
SSR3-202ENST00000463503 ATP7BP35670 1465 aa16.56■□□□□ 0.24
SSR3-202ENST00000463503 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
SSR3-202ENST00000463503 GPRASP1Q5JY77 1395 aa16.55■□□□□ 0.24
SSR3-202ENST00000463503 CFAP70Q5T0N1 1121 aa16.55■□□□□ 0.24
SSR3-202ENST00000463503 PRDM11Q9NQV5 511 aa16.55■□□□□ 0.24
SSR3-202ENST00000463503 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
SSR3-202ENST00000463503 AKAP12Q02952 1782 aa16.54■□□□□ 0.24
SSR3-202ENST00000463503 APBA3O96018 575 aa16.54■□□□□ 0.24
SSR3-202ENST00000463503 EIF3AQ14152 1382 aaKnown RBP16.53■□□□□ 0.24
SSR3-202ENST00000463503 TRIM26Q12899 539 aaPredicted RBP16.53■□□□□ 0.24
SSR3-202ENST00000463503 GOLGB1Q14789 3259 aaKnown RBP16.52■□□□□ 0.23
SSR3-202ENST00000463503 CEP350Q5VT06 3117 aa16.51■□□□□ 0.23
SSR3-202ENST00000463503 CHRNA2Q15822 529 aa16.5■□□□□ 0.23
SSR3-202ENST00000463503 HIRIP3Q9BW71 556 aaPredicted RBP16.5■□□□□ 0.23
SSR3-202ENST00000463503 BARGINQ6ZT62 677 aa16.49■□□□□ 0.23
SSR3-202ENST00000463503 SPON1Q9HCB6 807 aa16.49■□□□□ 0.23
SSR3-202ENST00000463503 KCNQ2O43526 872 aa16.48■□□□□ 0.23
SSR3-202ENST00000463503 STRN4Q9NRL3 753 aa16.48■□□□□ 0.23
SSR3-202ENST00000463503 NBPF8Q3BBV2 869 aa16.47■□□□□ 0.23
SSR3-202ENST00000463503 NBPF14Q5TI25 921 aa16.47■□□□□ 0.23
SSR3-202ENST00000463503 MPHOSPH9Q99550 1183 aa16.47■□□□□ 0.23
SSR3-202ENST00000463503 POGKQ9P215 609 aa16.47■□□□□ 0.23
SSR3-202ENST00000463503 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
SSR3-202ENST00000463503 MINK1Q8N4C8 1332 aaPredicted RBP16.46■□□□□ 0.23
SSR3-202ENST00000463503 COL5A2P05997 1499 aaPredicted RBP16.46■□□□□ 0.23
SSR3-202ENST00000463503 COL18A1P39060 1754 aa16.46■□□□□ 0.22
SSR3-202ENST00000463503 WASLO00401 505 aaPredicted RBP16.45■□□□□ 0.22
SSR3-202ENST00000463503 PAK3O75914 559 aaPredicted RBP16.45■□□□□ 0.22
SSR3-202ENST00000463503 USP35Q9P2H5 1018 aa16.45■□□□□ 0.22
SSR3-202ENST00000463503 OVOS2A0A0G2JMS6 1433 aa16.45■□□□□ 0.22
SSR3-202ENST00000463503 OVOS2A0A0J9YW53 1432 aa16.45■□□□□ 0.22
SSR3-202ENST00000463503 OVOS2Q6IE36 1432 aa16.45■□□□□ 0.22
SSR3-202ENST00000463503 RGPD5Q99666 1765 aa16.44■□□□□ 0.22
SSR3-202ENST00000463503 CPDO75976 1380 aa16.44■□□□□ 0.22
SSR3-202ENST00000463503 PDE3BQ13370 1112 aa16.44■□□□□ 0.22
SSR3-202ENST00000463503 ANO8Q9HCE9 1232 aaPredicted RBP16.44■□□□□ 0.22
SSR3-202ENST00000463503 POLR3AO14802 1390 aaPredicted RBP16.43■□□□□ 0.22
SSR3-202ENST00000463503 LARP1Q6PKG0 1096 aaKnown RBP16.43■□□□□ 0.22
SSR3-202ENST00000463503 NGDNQ8NEJ9 315 aaKnown RBP16.43■□□□□ 0.22
SSR3-202ENST00000463503 ZC3H6P61129 1189 aaKnown RBP16.42■□□□□ 0.22
SSR3-202ENST00000463503 ZNF784Q8NCA9 323 aaPredicted RBP16.42■□□□□ 0.22
SSR3-202ENST00000463503 TRAK1Q9UPV9 953 aa16.42■□□□□ 0.22
SSR3-202ENST00000463503 TCP11L2Q8N4U5 519 aa16.41■□□□□ 0.22
SSR3-202ENST00000463503 PDGFDQ9GZP0 370 aaPredicted RBP16.41■□□□□ 0.22
SSR3-202ENST00000463503 USP19O94966 1318 aa16.41■□□□□ 0.22
SSR3-202ENST00000463503 PAPPAQ13219 1627 aa16.41■□□□□ 0.22
SSR3-202ENST00000463503 DCAF8L1A6NGE4 600 aa16.39■□□□□ 0.21
SSR3-202ENST00000463503 PIK3C2AO00443 1686 aa16.39■□□□□ 0.21
SSR3-202ENST00000463503 COL24A1Q17RW2 1714 aa16.39■□□□□ 0.21
SSR3-202ENST00000463503 CRB1P82279 1406 aa16.38■□□□□ 0.21
SSR3-202ENST00000463503 NHSQ6T4R5 1651 aa16.38■□□□□ 0.21
SSR3-202ENST00000463503 PTGER2P43116 358 aa16.38■□□□□ 0.21
SSR3-202ENST00000463503 NUTM2GQ5VZR2 741 aa16.38■□□□□ 0.21
SSR3-202ENST00000463503 THRAP3Q9Y2W1 955 aaKnown RBP16.38■□□□□ 0.21
SSR3-202ENST00000463503 KIAA1210Q9ULL0 1709 aa16.38■□□□□ 0.21
SSR3-202ENST00000463503 SLIT3O75094 1523 aa16.38■□□□□ 0.21
SSR3-202ENST00000463503 QSER1Q2KHR3 1735 aa16.36■□□□□ 0.21
SSR3-202ENST00000463503 PLSCR1O15162 318 aa16.36■□□□□ 0.21
SSR3-202ENST00000463503 PTF1AQ7RTS3 328 aa16.36■□□□□ 0.21
SSR3-202ENST00000463503 NUDT16Q96DE0 195 aaKnown RBP16.36■□□□□ 0.21
SSR3-202ENST00000463503 QRICH2Q9H0J4 1663 aa16.36■□□□□ 0.21
SSR3-202ENST00000463503 EVA1CP58658 441 aa16.35■□□□□ 0.21
SSR3-202ENST00000463503 TUBGCP6Q96RT7 1819 aa16.35■□□□□ 0.21
SSR3-202ENST00000463503 BCL9O00512 1426 aa16.35■□□□□ 0.21
SSR3-202ENST00000463503 SHANK3Q9BYB0 1731 aa16.34■□□□□ 0.21
SSR3-202ENST00000463503 ACEP12821 1306 aa16.34■□□□□ 0.21
SSR3-202ENST00000463503 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.2
SSR3-202ENST00000463503 C11orf95C9JLR9 678 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms