RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 PAK3O75914 559 aaPredicted RBP24.88■■□□□ 1.57
VPS52-214ENST00000463486 SLC12A5Q9H2X9 1139 aa24.88■■□□□ 1.57
VPS52-214ENST00000463486 BRD4O60885 1362 aaPredicted RBP24.88■■□□□ 1.57
VPS52-214ENST00000463486 C8orf37Q96NL8 207 aa24.87■■□□□ 1.57
VPS52-214ENST00000463486 FNBP4Q8N3X1 1017 aaPredicted RBP24.86■■□□□ 1.57
VPS52-214ENST00000463486 ZNF692Q9BU19 519 aaPredicted RBP24.86■■□□□ 1.57
VPS52-214ENST00000463486 ABCA3Q99758 1704 aa24.86■■□□□ 1.57
VPS52-214ENST00000463486 CRYBG1Q9Y4K1 1723 aa24.86■■□□□ 1.57
VPS52-214ENST00000463486 AFF2P51816 1311 aa24.86■■□□□ 1.57
VPS52-214ENST00000463486 TMF1P82094 1093 aa24.85■■□□□ 1.57
VPS52-214ENST00000463486 AKAP12Q02952 1782 aa24.85■■□□□ 1.57
VPS52-214ENST00000463486 HSPA5P11021 654 aaKnown RBP24.84■■□□□ 1.57
VPS52-214ENST00000463486 NGLY1Q96IV0 654 aa24.83■■□□□ 1.57
VPS52-214ENST00000463486 MARF1Q9Y4F3 1742 aaKnown RBP24.83■■□□□ 1.57
VPS52-214ENST00000463486 EIF4G2P78344 907 aaKnown RBP eCLIP24.82■■□□□ 1.56
VPS52-214ENST00000463486 PLEKHG5O94827 1062 aa24.81■■□□□ 1.56
VPS52-214ENST00000463486 NUTM2GQ5VZR2 741 aa24.81■■□□□ 1.56
VPS52-214ENST00000463486 ZNF772Q68DY9 489 aaPredicted RBP24.81■■□□□ 1.56
VPS52-214ENST00000463486 ABTB2Q8N961 1025 aa24.81■■□□□ 1.56
VPS52-214ENST00000463486 TMC1Q8TDI8 760 aa24.81■■□□□ 1.56
VPS52-214ENST00000463486 TTC21BQ7Z4L5 1316 aa24.81■■□□□ 1.56
VPS52-214ENST00000463486 USP19O94966 1318 aa24.8■■□□□ 1.56
VPS52-214ENST00000463486 NRKQ7Z2Y5 1582 aa24.8■■□□□ 1.56
VPS52-214ENST00000463486 KTN1Q86UP2 1357 aaKnown RBP24.8■■□□□ 1.56
VPS52-214ENST00000463486 BCL9LQ86UU0 1499 aa24.79■■□□□ 1.56
VPS52-214ENST00000463486 MON2Q7Z3U7 1717 aa24.78■■□□□ 1.56
VPS52-214ENST00000463486 SLIT2O94813 1529 aa24.78■■□□□ 1.56
VPS52-214ENST00000463486 FAM83GA6ND36 823 aa24.78■■□□□ 1.56
VPS52-214ENST00000463486 A0A1W2PP64 1363 aa24.78■■□□□ 1.56
VPS52-214ENST00000463486 NINLQ9Y2I6 1382 aa24.78■■□□□ 1.56
VPS52-214ENST00000463486 PIK3C2AO00443 1686 aa24.76■■□□□ 1.55
VPS52-214ENST00000463486 TTC21AQ8NDW8 1320 aa24.75■■□□□ 1.55
VPS52-214ENST00000463486 PHRF1Q9P1Y6 1649 aaKnown RBP24.75■■□□□ 1.55
VPS52-214ENST00000463486 HAP1P54257 671 aaPredicted RBP24.74■■□□□ 1.55
VPS52-214ENST00000463486 CDCA8Q53HL2 280 aa24.74■■□□□ 1.55
VPS52-214ENST00000463486 NLRP13Q86W25 1043 aa24.74■■□□□ 1.55
VPS52-214ENST00000463486 TERF2IPQ9NYB0 399 aa24.74■■□□□ 1.55
VPS52-214ENST00000463486 USP21Q9UK80 565 aa24.74■■□□□ 1.55
VPS52-214ENST00000463486 HDGFL2Q7Z4V5 671 aaPredicted RBP24.73■■□□□ 1.55
VPS52-214ENST00000463486 QTRT2Q9H974 415 aaKnown RBP24.73■■□□□ 1.55
VPS52-214ENST00000463486 C11orf95C9JLR9 678 aaPredicted RBP24.72■■□□□ 1.55
VPS52-214ENST00000463486 NLRP6P59044 892 aa24.72■■□□□ 1.55
VPS52-214ENST00000463486 EDC4Q6P2E9 1401 aaKnown RBP24.71■■□□□ 1.55
VPS52-214ENST00000463486 GCP02774 474 aa24.71■■□□□ 1.55
VPS52-214ENST00000463486 SLIT3O75094 1523 aa24.71■■□□□ 1.55
VPS52-214ENST00000463486 ATRNO75882 1429 aa24.7■■□□□ 1.55
VPS52-214ENST00000463486 ANKRD36BQ8N2N9 1353 aa24.7■■□□□ 1.55
VPS52-214ENST00000463486 ZRANB1Q9UGI0 708 aa24.7■■□□□ 1.54
VPS52-214ENST00000463486 USP31Q70CQ4 1352 aa24.69■■□□□ 1.54
VPS52-214ENST00000463486 KIAA0232Q92628 1395 aa24.69■■□□□ 1.54
VPS52-214ENST00000463486 UNC5CLQ8IV45 518 aa24.69■■□□□ 1.54
VPS52-214ENST00000463486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.69■■□□□ 1.54
VPS52-214ENST00000463486 MYOM1P52179 1685 aa24.69■■□□□ 1.54
VPS52-214ENST00000463486 CPDO75976 1380 aa24.68■■□□□ 1.54
VPS52-214ENST00000463486 NME9Q86XW9 330 aa24.68■■□□□ 1.54
VPS52-214ENST00000463486 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.67■■□□□ 1.54
VPS52-214ENST00000463486 PLCH1Q4KWH8 1693 aa24.67■■□□□ 1.54
VPS52-214ENST00000463486 ZC3H6P61129 1189 aaKnown RBP24.67■■□□□ 1.54
VPS52-214ENST00000463486 TRPC5Q9UL62 973 aaPredicted RBP24.67■■□□□ 1.54
VPS52-214ENST00000463486 COL14A1Q05707 1796 aaKnown RBP24.67■■□□□ 1.54
VPS52-214ENST00000463486 RXRBP28702 533 aa24.66■■□□□ 1.54
VPS52-214ENST00000463486 NWD2Q9ULI1 1742 aa24.66■■□□□ 1.54
VPS52-214ENST00000463486 RBM6P78332 1123 aaKnown RBP24.65■■□□□ 1.54
VPS52-214ENST00000463486 CARD14Q9BXL6 1004 aa24.65■■□□□ 1.54
VPS52-214ENST00000463486 PRDM11Q9NQV5 511 aa24.65■■□□□ 1.54
VPS52-214ENST00000463486 USP54Q70EL1 1684 aa24.65■■□□□ 1.54
VPS52-214ENST00000463486 BTG4Q9NY30 223 aa24.64■■□□□ 1.54
VPS52-214ENST00000463486 CHRNA2Q15822 529 aa24.63■■□□□ 1.53
VPS52-214ENST00000463486 NRAPQ86VF7 1730 aa24.62■■□□□ 1.53
VPS52-214ENST00000463486 VPS72Q15906 364 aa24.61■■□□□ 1.53
VPS52-214ENST00000463486 GJD4Q96KN9 370 aaPredicted RBP24.61■■□□□ 1.53
VPS52-214ENST00000463486 CDK12Q9NYV4 1490 aaPredicted RBP24.61■■□□□ 1.53
VPS52-214ENST00000463486 NFAT5O94916 1531 aa24.61■■□□□ 1.53
VPS52-214ENST00000463486 OVOS2A0A0J9YW53 1432 aa24.61■■□□□ 1.53
VPS52-214ENST00000463486 OVOS2Q6IE36 1432 aa24.61■■□□□ 1.53
VPS52-214ENST00000463486 LMO7Q8WWI1 1683 aa24.59■■□□□ 1.53
VPS52-214ENST00000463486 CAMTA1Q9Y6Y1 1673 aa24.59■■□□□ 1.53
VPS52-214ENST00000463486 ARHGEF25Q86VW2 580 aa24.59■■□□□ 1.53
VPS52-214ENST00000463486 KCNH5Q8NCM2 988 aa24.59■■□□□ 1.53
VPS52-214ENST00000463486 GLI3P10071 1580 aa24.59■■□□□ 1.53
VPS52-214ENST00000463486 SOCS7O14512 581 aa24.58■■□□□ 1.53
VPS52-214ENST00000463486 FYB1O15117 783 aa24.58■■□□□ 1.53
VPS52-214ENST00000463486 KIF7Q2M1P5 1343 aa24.57■■□□□ 1.52
VPS52-214ENST00000463486 COL18A1P39060 1754 aa24.57■■□□□ 1.52
VPS52-214ENST00000463486 AATKQ6ZMQ8 1374 aa24.56■■□□□ 1.52
VPS52-214ENST00000463486 RGS12O14924 1447 aa24.56■■□□□ 1.52
VPS52-214ENST00000463486 POLR3GLQ9BT43 218 aa24.54■■□□□ 1.52
VPS52-214ENST00000463486 AXIN2Q9Y2T1 843 aa24.54■■□□□ 1.52
VPS52-214ENST00000463486 ONECUT3O60422 494 aaPredicted RBP24.53■■□□□ 1.52
VPS52-214ENST00000463486 NSD3Q9BZ95 1437 aa24.52■■□□□ 1.52
VPS52-214ENST00000463486 SOX12O15370 315 aa24.52■■□□□ 1.52
VPS52-214ENST00000463486 SPATA31A5Q5VU36 1347 aa24.52■■□□□ 1.52
VPS52-214ENST00000463486 SPATA31A7Q8IWB4 1347 aa24.52■■□□□ 1.52
VPS52-214ENST00000463486 GGNBP2Q9H3C7 697 aa24.5■■□□□ 1.51
VPS52-214ENST00000463486 PANK3Q9H999 370 aa24.5■■□□□ 1.51
VPS52-214ENST00000463486 COL5A2P05997 1499 aaPredicted RBP24.5■■□□□ 1.51
VPS52-214ENST00000463486 COG3Q96JB2 828 aa24.49■■□□□ 1.51
VPS52-214ENST00000463486 FBLN1P23142 703 aa24.48■■□□□ 1.51
VPS52-214ENST00000463486 WASHC2AQ641Q2 1341 aa24.48■■□□□ 1.51
VPS52-214ENST00000463486 STRN4Q9NRL3 753 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms