RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 DNAJC14Q6Y2X3 702 aaPredicted RBP6.97□□□□□ -1.29
TRA2B-207ENST00000463328 PLCD3Q8N3E9 789 aa6.97□□□□□ -1.29
TRA2B-207ENST00000463328 SPOCK3Q9BQ16 436 aa6.97□□□□□ -1.29
TRA2B-207ENST00000463328 ZNF219Q9P2Y4 722 aaPredicted RBP6.97□□□□□ -1.29
TRA2B-207ENST00000463328 COG6Q9Y2V7 657 aa6.97□□□□□ -1.29
TRA2B-207ENST00000463328 ARHGAP5Q13017 1502 aa6.96□□□□□ -1.29
TRA2B-207ENST00000463328 UNC13BO14795 1591 aa6.96□□□□□ -1.29
TRA2B-207ENST00000463328 L3MBTL2Q969R5 705 aa6.96□□□□□ -1.3
TRA2B-207ENST00000463328 ARHGEF12Q9NZN5 1544 aa6.96□□□□□ -1.3
TRA2B-207ENST00000463328 UHRF1BP1Q6BDS2 1440 aa6.96□□□□□ -1.3
TRA2B-207ENST00000463328 KAT6BQ8WYB5 2073 aa6.96□□□□□ -1.3
TRA2B-207ENST00000463328 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.96□□□□□ -1.3
TRA2B-207ENST00000463328 SH3BP5O60239 455 aa6.96□□□□□ -1.3
TRA2B-207ENST00000463328 FAN1Q9Y2M0 1017 aa6.96□□□□□ -1.3
TRA2B-207ENST00000463328 SPATA31E1Q6ZUB1 1445 aa6.96□□□□□ -1.3
TRA2B-207ENST00000463328 TTC37Q6PGP7 1564 aa6.96□□□□□ -1.3
TRA2B-207ENST00000463328 U2SURPO15042 1029 aaKnown RBP6.95□□□□□ -1.3
TRA2B-207ENST00000463328 RTEL1-TNFRSF6BF6WH68 1400 aa6.95□□□□□ -1.3
TRA2B-207ENST00000463328 HNRNPMP52272 730 aaKnown RBP eCLIP6.95□□□□□ -1.3
TRA2B-207ENST00000463328 ZC3H6P61129 1189 aaKnown RBP6.95□□□□□ -1.3
TRA2B-207ENST00000463328 KCNH8Q96L42 1107 aa6.95□□□□□ -1.3
TRA2B-207ENST00000463328 EIF4G2P78344 907 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRA2B-207ENST00000463328 ZNF330Q9Y3S2 320 aaPredicted RBP6.94□□□□□ -1.3
TRA2B-207ENST00000463328 KIF15Q9NS87 1388 aa6.94□□□□□ -1.3
TRA2B-207ENST00000463328 ATP10AO60312 1499 aa6.94□□□□□ -1.3
TRA2B-207ENST00000463328 MAGI2Q86UL8 1455 aa6.94□□□□□ -1.3
TRA2B-207ENST00000463328 SSFA2P28290 1259 aa6.94□□□□□ -1.3
TRA2B-207ENST00000463328 RHBDL3P58872 404 aa6.94□□□□□ -1.3
TRA2B-207ENST00000463328 PARP9Q8IXQ6 854 aa6.94□□□□□ -1.3
TRA2B-207ENST00000463328 DUOX2Q9NRD8 1548 aa6.93□□□□□ -1.3
TRA2B-207ENST00000463328 DDX10Q13206 875 aaKnown RBP6.93□□□□□ -1.3
TRA2B-207ENST00000463328 CCDC184Q52MB2 194 aa6.93□□□□□ -1.3
TRA2B-207ENST00000463328 GPIHBP1Q8IV16 184 aa6.93□□□□□ -1.3
TRA2B-207ENST00000463328 SDR16C5Q8N3Y7 309 aa6.93□□□□□ -1.3
TRA2B-207ENST00000463328 IQGAP3Q86VI3 1631 aa6.93□□□□□ -1.3
TRA2B-207ENST00000463328 E2F4Q16254 413 aa6.93□□□□□ -1.3
TRA2B-207ENST00000463328 ERBINQ96RT1 1412 aa6.93□□□□□ -1.3
TRA2B-207ENST00000463328 TBC1D12O60347 775 aa6.92□□□□□ -1.3
TRA2B-207ENST00000463328 CCDC96Q2M329 555 aa6.92□□□□□ -1.3
TRA2B-207ENST00000463328 NUP155O75694 1391 aa6.92□□□□□ -1.3
TRA2B-207ENST00000463328 GOPCQ9HD26 462 aa6.92□□□□□ -1.3
TRA2B-207ENST00000463328 CHPF2Q9P2E5 772 aa6.92□□□□□ -1.3
TRA2B-207ENST00000463328 ASXL2Q76L83 1435 aa6.92□□□□□ -1.3
TRA2B-207ENST00000463328 ABCC1P33527 1531 aa6.92□□□□□ -1.3
TRA2B-207ENST00000463328 SYCP2Q9BX26 1530 aa6.92□□□□□ -1.3
TRA2B-207ENST00000463328 ABCA9Q8IUA7 1624 aa6.92□□□□□ -1.3
TRA2B-207ENST00000463328 HSPA5P11021 654 aaKnown RBP6.91□□□□□ -1.3
TRA2B-207ENST00000463328 FAM135AQ9P2D6 1515 aa6.91□□□□□ -1.3
TRA2B-207ENST00000463328 ANP32CO43423 234 aa6.91□□□□□ -1.3
TRA2B-207ENST00000463328 C11orf96Q7Z7L8 435 aa6.91□□□□□ -1.3
TRA2B-207ENST00000463328 ZNF622Q969S3 477 aaKnown RBP eCLIP6.91□□□□□ -1.3
TRA2B-207ENST00000463328 SPACA7Q96KW9 195 aa6.91□□□□□ -1.3
TRA2B-207ENST00000463328 METTL14Q9HCE5 456 aaKnown RBP6.91□□□□□ -1.3
TRA2B-207ENST00000463328 SH3BP1Q9Y3L3 701 aa6.91□□□□□ -1.3
TRA2B-207ENST00000463328 CLGNO14967 610 aa6.91□□□□□ -1.3
TRA2B-207ENST00000463328 EPB41L2O43491 1005 aaKnown RBP6.91□□□□□ -1.3
TRA2B-207ENST00000463328 ARID4AP29374 1257 aaPredicted RBP6.91□□□□□ -1.3
TRA2B-207ENST00000463328 NBPF8Q3BBV2 869 aa6.91□□□□□ -1.3
TRA2B-207ENST00000463328 EGFLAMQ63HQ2 1017 aa6.91□□□□□ -1.3
TRA2B-207ENST00000463328 TBC1D2Q9BYX2 928 aa6.91□□□□□ -1.3
TRA2B-207ENST00000463328 SPAG9O60271 1321 aaKnown RBP6.9□□□□□ -1.3
TRA2B-207ENST00000463328 BDNFP23560 247 aa6.9□□□□□ -1.3
TRA2B-207ENST00000463328 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.9□□□□□ -1.3
TRA2B-207ENST00000463328 MAGEC2Q9UBF1 373 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-207ENST00000463328 USTQ9Y2C2 406 aa6.9□□□□□ -1.3
TRA2B-207ENST00000463328 RALGAPBQ86X10 1494 aa6.9□□□□□ -1.31
TRA2B-207ENST00000463328 WASHC2AQ641Q2 1341 aa6.9□□□□□ -1.31
TRA2B-207ENST00000463328 RFX1P22670 979 aa6.9□□□□□ -1.31
TRA2B-207ENST00000463328 POLD1P28340 1107 aa6.9□□□□□ -1.31
TRA2B-207ENST00000463328 MLLT3P42568 568 aaPredicted RBP6.9□□□□□ -1.31
TRA2B-207ENST00000463328 NLGN1Q8N2Q7 840 aa6.9□□□□□ -1.31
TRA2B-207ENST00000463328 LNPKQ9C0E8 428 aa6.9□□□□□ -1.31
TRA2B-207ENST00000463328 CCDC7Q96M83 1385 aa6.89□□□□□ -1.31
TRA2B-207ENST00000463328 LAMC1P11047 1609 aa6.89□□□□□ -1.31
TRA2B-207ENST00000463328 CFAP74Q9C0B2 1584 aa6.89□□□□□ -1.31
TRA2B-207ENST00000463328 POM121CA8CG34 1229 aa6.89□□□□□ -1.31
TRA2B-207ENST00000463328 EXOC5O00471 708 aa6.89□□□□□ -1.31
TRA2B-207ENST00000463328 GYS2P54840 703 aa6.89□□□□□ -1.31
TRA2B-207ENST00000463328 SRPK2P78362 688 aaKnown RBP6.89□□□□□ -1.31
TRA2B-207ENST00000463328 CCDC181Q5TID7 509 aa6.89□□□□□ -1.31
TRA2B-207ENST00000463328 GIPC2Q8TF65 315 aa6.89□□□□□ -1.31
TRA2B-207ENST00000463328 STAC3Q96MF2 364 aa6.89□□□□□ -1.31
TRA2B-207ENST00000463328 GNL3LQ9NVN8 582 aaKnown RBP6.89□□□□□ -1.31
TRA2B-207ENST00000463328 FANCAO15360 1455 aa6.89□□□□□ -1.31
TRA2B-207ENST00000463328 CNTLNQ9NXG0 1405 aa6.89□□□□□ -1.31
TRA2B-207ENST00000463328 KDM5CP41229 1560 aa6.88□□□□□ -1.31
TRA2B-207ENST00000463328 NEURL4Q96JN8 1562 aa6.88□□□□□ -1.31
TRA2B-207ENST00000463328 ARMCX6Q7L4S7 300 aa6.88□□□□□ -1.31
TRA2B-207ENST00000463328 YTHDC1Q96MU7 727 aaKnown RBP6.88□□□□□ -1.31
TRA2B-207ENST00000463328 DEPDC5O75140 1603 aa6.88□□□□□ -1.31
TRA2B-207ENST00000463328 ERBB3P21860 1342 aa6.88□□□□□ -1.31
TRA2B-207ENST00000463328 PTPROQ16827 1216 aa6.88□□□□□ -1.31
TRA2B-207ENST00000463328 PBXIP1Q96AQ6 731 aa6.88□□□□□ -1.31
TRA2B-207ENST00000463328 PPP4CP60510 307 aa6.87□□□□□ -1.31
TRA2B-207ENST00000463328 TAGLNQ01995 201 aaKnown RBP6.87□□□□□ -1.31
TRA2B-207ENST00000463328 C4orf46Q504U0 113 aa6.87□□□□□ -1.31
TRA2B-207ENST00000463328 GET4Q7L5D6 327 aaPredicted RBP6.87□□□□□ -1.31
TRA2B-207ENST00000463328 BCL2L13Q9BXK5 485 aa6.87□□□□□ -1.31
TRA2B-207ENST00000463328 EIF2AK4Q9P2K8 1649 aaKnown RBP6.87□□□□□ -1.31
TRA2B-207ENST00000463328 CD109Q6YHK3 1445 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms