RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 AMOTQ4VCS5 1084 aa14.62□□□□□ -0.07
RBM39-223ENST00000463004 IL16Q14005 1332 aa14.62□□□□□ -0.07
RBM39-223ENST00000463004 LRRFIP1Q32MZ4 808 aaKnown RBP14.62□□□□□ -0.07
RBM39-223ENST00000463004 FAM161AQ3B820 660 aa14.62□□□□□ -0.07
RBM39-223ENST00000463004 RBM19Q9Y4C8 960 aaKnown RBP14.62□□□□□ -0.07
RBM39-223ENST00000463004 FKBP5Q13451 457 aaPredicted RBP14.62□□□□□ -0.07
RBM39-223ENST00000463004 BCL2L13Q9BXK5 485 aa14.62□□□□□ -0.07
RBM39-223ENST00000463004 YEATS2Q9ULM3 1422 aa14.61□□□□□ -0.07
RBM39-223ENST00000463004 UNC13BO14795 1591 aa14.61□□□□□ -0.07
RBM39-223ENST00000463004 TWISTNBQ3B726 338 aaPredicted RBP14.61□□□□□ -0.07
RBM39-223ENST00000463004 NUTM2GQ5VZR2 741 aa14.61□□□□□ -0.07
RBM39-223ENST00000463004 SPATA31E1Q6ZUB1 1445 aa14.61□□□□□ -0.07
RBM39-223ENST00000463004 HSP90B1P14625 803 aaKnown RBP14.61□□□□□ -0.07
RBM39-223ENST00000463004 FGD1P98174 961 aa14.61□□□□□ -0.07
RBM39-223ENST00000463004 WWC1Q8IX03 1113 aa14.61□□□□□ -0.07
RBM39-223ENST00000463004 CROCC2H7BZ55 1655 aa14.6□□□□□ -0.07
RBM39-223ENST00000463004 C9orf78Q9NZ63 289 aaPredicted RBP14.6□□□□□ -0.07
RBM39-223ENST00000463004 TMEM2Q9UHN6 1383 aa14.6□□□□□ -0.07
RBM39-223ENST00000463004 PLIN1O60240 522 aa14.6□□□□□ -0.07
RBM39-223ENST00000463004 EXOSC9Q06265 439 aaKnown RBP14.6□□□□□ -0.07
RBM39-223ENST00000463004 TMX4Q9H1E5 349 aaPredicted RBP14.6□□□□□ -0.07
RBM39-223ENST00000463004 CHMP4CQ96CF2 233 aa14.6□□□□□ -0.07
RBM39-223ENST00000463004 IFT57Q9NWB7 429 aa14.59□□□□□ -0.07
RBM39-223ENST00000463004 PPIP5K1Q6PFW1 1433 aa14.59□□□□□ -0.07
RBM39-223ENST00000463004 GORABQ5T7V8 394 aa14.59□□□□□ -0.07
RBM39-223ENST00000463004 ZNF330Q9Y3S2 320 aaPredicted RBP14.59□□□□□ -0.07
RBM39-223ENST00000463004 ACEP12821 1306 aa14.59□□□□□ -0.07
RBM39-223ENST00000463004 NME9Q86XW9 330 aa14.58□□□□□ -0.08
RBM39-223ENST00000463004 CDCA7LQ96GN5 454 aa14.58□□□□□ -0.08
RBM39-223ENST00000463004 MSH6P52701 1360 aa14.58□□□□□ -0.08
RBM39-223ENST00000463004 EIF2S2P20042 333 aaKnown RBP14.58□□□□□ -0.08
RBM39-223ENST00000463004 ALDH1L2Q3SY69 923 aa14.58□□□□□ -0.08
RBM39-223ENST00000463004 ZNF530Q6P9A1 599 aaPredicted RBP14.58□□□□□ -0.08
RBM39-223ENST00000463004 PRDM11Q9NQV5 511 aa14.58□□□□□ -0.08
RBM39-223ENST00000463004 NLRP1Q9C000 1473 aa14.58□□□□□ -0.08
RBM39-223ENST00000463004 CCDC184Q52MB2 194 aa14.58□□□□□ -0.08
RBM39-223ENST00000463004 CCT4P50991 539 aaKnown RBP14.57□□□□□ -0.08
RBM39-223ENST00000463004 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
RBM39-223ENST00000463004 CCDC27Q2M243 656 aa14.56□□□□□ -0.08
RBM39-223ENST00000463004 EFCAB6Q5THR3 1501 aa14.56□□□□□ -0.08
RBM39-223ENST00000463004 GNAT3A8MTJ3 354 aa14.56□□□□□ -0.08
RBM39-223ENST00000463004 RRS1Q15050 365 aaKnown RBP14.56□□□□□ -0.08
RBM39-223ENST00000463004 ANKRD45Q5TZF3 282 aa14.56□□□□□ -0.08
RBM39-223ENST00000463004 APBB1O00213 710 aa14.56□□□□□ -0.08
RBM39-223ENST00000463004 KDM6BO15054 1643 aa14.55□□□□□ -0.08
RBM39-223ENST00000463004 ABCC3O15438 1527 aa14.55□□□□□ -0.08
RBM39-223ENST00000463004 NKTRP30414 1462 aaKnown RBP14.55□□□□□ -0.08
RBM39-223ENST00000463004 FYB1O15117 783 aa14.55□□□□□ -0.08
RBM39-223ENST00000463004 CHMP3Q9Y3E7 222 aa14.55□□□□□ -0.08
RBM39-223ENST00000463004 RUFY2Q8WXA3 655 aa14.55□□□□□ -0.08
RBM39-223ENST00000463004 GCC1Q96CN9 775 aa14.55□□□□□ -0.08
RBM39-223ENST00000463004 NPHP3Q7Z494 1330 aa14.55□□□□□ -0.08
RBM39-223ENST00000463004 ATF7IPQ6VMQ6 1270 aa14.54□□□□□ -0.08
RBM39-223ENST00000463004 CDC42BPBQ9Y5S2 1711 aa14.54□□□□□ -0.08
RBM39-223ENST00000463004 C19orf44Q9H6X5 657 aa14.54□□□□□ -0.08
RBM39-223ENST00000463004 MEX3CQ5U5Q3 659 aaKnown RBP14.54□□□□□ -0.08
RBM39-223ENST00000463004 ERVK-7P63135 1459 aa14.54□□□□□ -0.08
RBM39-223ENST00000463004 TRIM6-TRIM34B2RNG4 842 aa14.53□□□□□ -0.08
RBM39-223ENST00000463004 PER1O15534 1290 aaPredicted RBP14.53□□□□□ -0.08
RBM39-223ENST00000463004 KRT28Q7Z3Y7 464 aa14.53□□□□□ -0.08
RBM39-223ENST00000463004 LMTK2Q8IWU2 1503 aa14.53□□□□□ -0.08
RBM39-223ENST00000463004 EDC4Q6P2E9 1401 aaKnown RBP14.53□□□□□ -0.08
RBM39-223ENST00000463004 KIF1BO60333 1816 aa14.53□□□□□ -0.08
RBM39-223ENST00000463004 REC8O95072 547 aa14.53□□□□□ -0.08
RBM39-223ENST00000463004 GTF2E1P29083 439 aaPredicted RBP14.53□□□□□ -0.08
RBM39-223ENST00000463004 TOM1L2Q6ZVM7 507 aa14.53□□□□□ -0.08
RBM39-223ENST00000463004 UBTFL1P0CB47 393 aaPredicted RBP14.53□□□□□ -0.08
RBM39-223ENST00000463004 PDE4AP27815 886 aa14.52□□□□□ -0.08
RBM39-223ENST00000463004 HTATSF1O43719 755 aaKnown RBP14.52□□□□□ -0.09
RBM39-223ENST00000463004 NBR1Q14596 966 aa14.52□□□□□ -0.09
RBM39-223ENST00000463004 HDGFL1Q5TGJ6 251 aa14.52□□□□□ -0.09
RBM39-223ENST00000463004 RIC3Q7Z5B4 369 aa14.52□□□□□ -0.09
RBM39-223ENST00000463004 KCNA6P17658 529 aa14.51□□□□□ -0.09
RBM39-223ENST00000463004 G3BP1Q13283 466 aaKnown RBP eCLIP14.51□□□□□ -0.09
RBM39-223ENST00000463004 PLEKHG1Q9ULL1 1385 aa14.51□□□□□ -0.09
RBM39-223ENST00000463004 IPO9Q96P70 1041 aaKnown RBP14.51□□□□□ -0.09
RBM39-223ENST00000463004 TSHZ2Q9NRE2 1034 aa14.51□□□□□ -0.09
RBM39-223ENST00000463004 ST18O60284 1047 aa14.51□□□□□ -0.09
RBM39-223ENST00000463004 ERC2O15083 957 aa14.5□□□□□ -0.09
RBM39-223ENST00000463004 MVPQ14764 893 aaKnown RBP14.5□□□□□ -0.09
RBM39-223ENST00000463004 PRDM15P57071 1507 aaPredicted RBP14.5□□□□□ -0.09
RBM39-223ENST00000463004 CABP4P57796 275 aa14.5□□□□□ -0.09
RBM39-223ENST00000463004 ERC1Q8IUD2 1116 aa14.5□□□□□ -0.09
RBM39-223ENST00000463004 PANK1Q8TE04 598 aa14.5□□□□□ -0.09
RBM39-223ENST00000463004 ZRSR1Q15695 479 aaKnown RBP14.49□□□□□ -0.09
RBM39-223ENST00000463004 GBP4Q96PP9 640 aa14.49□□□□□ -0.09
RBM39-223ENST00000463004 EMILIN1Q9Y6C2 1016 aa14.49□□□□□ -0.09
RBM39-223ENST00000463004 PIK3R4Q99570 1358 aa14.49□□□□□ -0.09
RBM39-223ENST00000463004 FOXO3O43524 673 aa14.49□□□□□ -0.09
RBM39-223ENST00000463004 GLI2P10070 1586 aa14.49□□□□□ -0.09
RBM39-223ENST00000463004 MFAP1P55081 439 aaKnown RBP14.49□□□□□ -0.09
RBM39-223ENST00000463004 TAF7Q15545 349 aaPredicted RBP14.49□□□□□ -0.09
RBM39-223ENST00000463004 A0A1W2PP64 1363 aa14.48□□□□□ -0.09
RBM39-223ENST00000463004 FLT4P35916 1363 aa14.48□□□□□ -0.09
RBM39-223ENST00000463004 GNAI2P04899 355 aa14.48□□□□□ -0.09
RBM39-223ENST00000463004 IFIT2P09913 472 aaKnown RBP14.48□□□□□ -0.09
RBM39-223ENST00000463004 KIF3AQ9Y496 699 aa14.48□□□□□ -0.09
RBM39-223ENST00000463004 TSR2Q969E8 191 aaKnown RBP14.48□□□□□ -0.09
RBM39-223ENST00000463004 PLEKHG3A1L390 1219 aa14.47□□□□□ -0.09
RBM39-223ENST00000463004 NOB1Q9ULX3 412 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms