RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 MRPL58Q14197 206 aaKnown RBP4.84□□□□□ -1.63
SMC4-203ENST00000462668 CSPP1Q1MSJ5 1256 aa4.84□□□□□ -1.63
SMC4-203ENST00000462668 PER1O15534 1290 aaPredicted RBP4.84□□□□□ -1.63
SMC4-203ENST00000462668 SALL2Q9Y467 1007 aaPredicted RBP4.84□□□□□ -1.64
SMC4-203ENST00000462668 FBXO45P0C2W1 286 aa4.83□□□□□ -1.64
SMC4-203ENST00000462668 PNMA3Q9UL41 463 aa4.83□□□□□ -1.64
SMC4-203ENST00000462668 KHSRPQ92945 711 aaKnown RBP eCLIP4.83□□□□□ -1.649e-7■■□□□ 14.4
SMC4-203ENST00000462668 COL26A1Q96A83 441 aa4.83□□□□□ -1.64
SMC4-203ENST00000462668 USP17L5A8MUK1 530 aa4.83□□□□□ -1.64
SMC4-203ENST00000462668 POTEIP0CG38 1075 aa4.83□□□□□ -1.64
SMC4-203ENST00000462668 PACS2Q86VP3 889 aa4.82□□□□□ -1.64
SMC4-203ENST00000462668 ZBED2Q9BTP6 218 aa4.82□□□□□ -1.64
SMC4-203ENST00000462668 ZBBXA8MT70 800 aa4.82□□□□□ -1.64
SMC4-203ENST00000462668 RETREG3Q86VR2 466 aa4.82□□□□□ -1.64
SMC4-203ENST00000462668 DRC1Q96MC2 740 aa4.82□□□□□ -1.64
SMC4-203ENST00000462668 LHX6Q9UPM6 363 aa4.82□□□□□ -1.64
SMC4-203ENST00000462668 ZBTB7BO15156 539 aaPredicted RBP4.82□□□□□ -1.64
SMC4-203ENST00000462668 PPP4R3BQ5MIZ7 849 aa4.82□□□□□ -1.64
SMC4-203ENST00000462668 C3orf67Q6ZVT6 689 aa4.82□□□□□ -1.64
SMC4-203ENST00000462668 ASB16Q96NS5 453 aa4.82□□□□□ -1.64
SMC4-203ENST00000462668 SREK1Q8WXA9 508 aaKnown RBP4.81□□□□□ -1.64
SMC4-203ENST00000462668 ATP5J2-PTCD1G3V325 749 aa4.81□□□□□ -1.64
SMC4-203ENST00000462668 PNMA1Q8ND90 353 aa4.81□□□□□ -1.64
SMC4-203ENST00000462668 NUDT7P0C024 238 aa4.81□□□□□ -1.64
SMC4-203ENST00000462668 MORN1Q5T089 497 aa4.81□□□□□ -1.64
SMC4-203ENST00000462668 SPATA32Q96LK8 384 aa4.81□□□□□ -1.64
SMC4-203ENST00000462668 GABBR2O75899 941 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 PTPREP23469 700 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 ANKMY2Q8IV38 441 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 CEP126Q9P2H0 1117 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 FKBPLQ9UIM3 349 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 CLDN10P78369 228 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 ARSIQ5FYB1 569 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 ZC3H6P61129 1189 aaKnown RBP4.8□□□□□ -1.64
SMC4-203ENST00000462668 ARHGAP4P98171 946 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 THAP11Q96EK4 314 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 M0R2N6 131 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 ICMTO60725 284 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 IGHA2P01877 340 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 DOK7Q18PE1 504 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 CDCA8Q53HL2 280 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 BCL2L13Q9BXK5 485 aa4.8□□□□□ -1.64
SMC4-203ENST00000462668 CXXC1Q9P0U4 656 aaPredicted RBP4.8□□□□□ -1.64
SMC4-203ENST00000462668 ANKRD33BA6NCL7 494 aa4.79□□□□□ -1.64
SMC4-203ENST00000462668 MARSP56192 900 aaKnown RBP4.79□□□□□ -1.64
SMC4-203ENST00000462668 MAP7D1Q3KQU3 841 aa4.79□□□□□ -1.64
SMC4-203ENST00000462668 GPKOWQ92917 476 aaPredicted RBP eCLIP4.79□□□□□ -1.645e-16■□□□□ 8.4
SMC4-203ENST00000462668 METRNQ9UJH8 293 aa4.79□□□□□ -1.64
SMC4-203ENST00000462668 SEC24BO95487 1268 aa4.79□□□□□ -1.64
SMC4-203ENST00000462668 LARGE2Q8N3Y3 721 aa4.79□□□□□ -1.64
SMC4-203ENST00000462668 SLC43A3Q8NBI5 491 aa4.79□□□□□ -1.64
SMC4-203ENST00000462668 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.79□□□□□ -1.64
SMC4-203ENST00000462668 POTEJP0CG39 1038 aa4.79□□□□□ -1.64
SMC4-203ENST00000462668 RAD51AP2Q09MP3 1159 aa4.79□□□□□ -1.64
SMC4-203ENST00000462668 BHMG1C9JSJ3 638 aaPredicted RBP4.78□□□□□ -1.64
SMC4-203ENST00000462668 ATP6V1AP38606 617 aa4.78□□□□□ -1.64
SMC4-203ENST00000462668 RDH13Q8NBN7 331 aa4.78□□□□□ -1.64
SMC4-203ENST00000462668 ATP2B4P23634 1241 aa4.78□□□□□ -1.64
SMC4-203ENST00000462668 SWT1Q5T5J6 900 aaKnown RBP4.78□□□□□ -1.64
SMC4-203ENST00000462668 FAM200AQ8TCP9 573 aa4.78□□□□□ -1.64
SMC4-203ENST00000462668 SERPINB4P48594 390 aa4.78□□□□□ -1.64
SMC4-203ENST00000462668 UBXN4Q92575 508 aa4.77□□□□□ -1.65
SMC4-203ENST00000462668 MKRN1Q9UHC7 482 aaKnown RBP4.77□□□□□ -1.65
SMC4-203ENST00000462668 FUT2Q10981 343 aa4.77□□□□□ -1.65
SMC4-203ENST00000462668 LAPTM4BQ86VI4 370 aa4.77□□□□□ -1.65
SMC4-203ENST00000462668 METTL16Q86W50 562 aaKnown RBP4.77□□□□□ -1.65
SMC4-203ENST00000462668 WEE1P30291 646 aa4.77□□□□□ -1.65
SMC4-203ENST00000462668 FMR1Q06787 632 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMC4-203ENST00000462668 ARMC5Q96C12 935 aa4.77□□□□□ -1.65
SMC4-203ENST00000462668 RABGEF1Q9UJ41 708 aa4.77□□□□□ -1.65
SMC4-203ENST00000462668 PTPRNQ16849 979 aa4.77□□□□□ -1.65
SMC4-203ENST00000462668 GRIPAP1Q4V328 841 aa4.77□□□□□ -1.65
SMC4-203ENST00000462668 PDXDC2PQ6P474 469 aa4.77□□□□□ -1.65
SMC4-203ENST00000462668 PLPP7Q8NBV4 271 aa4.77□□□□□ -1.65
SMC4-203ENST00000462668 ATP1B4Q9UN42 357 aaPredicted RBP4.77□□□□□ -1.65
SMC4-203ENST00000462668 ACTN4O43707 911 aaKnown RBP4.76□□□□□ -1.65
SMC4-203ENST00000462668 PROX2Q3B8N5 592 aa4.76□□□□□ -1.65
SMC4-203ENST00000462668 RGL4Q8IZJ4 473 aa4.76□□□□□ -1.65
SMC4-203ENST00000462668 ZNF592Q92610 1267 aa4.76□□□□□ -1.65
SMC4-203ENST00000462668 USP35Q9P2H5 1018 aa4.76□□□□□ -1.65
SMC4-203ENST00000462668 BRICD5Q6PL45 260 aa4.76□□□□□ -1.65
SMC4-203ENST00000462668 GIPC2Q8TF65 315 aa4.76□□□□□ -1.65
SMC4-203ENST00000462668 GMLQ99445 158 aa4.76□□□□□ -1.65
SMC4-203ENST00000462668 KIAA1468Q9P260 1216 aa4.76□□□□□ -1.65
SMC4-203ENST00000462668 DSC3Q14574 896 aa4.75□□□□□ -1.65
SMC4-203ENST00000462668 CUEDC1Q9NWM3 386 aaPredicted RBP4.75□□□□□ -1.65
SMC4-203ENST00000462668 C21orf2O43822 256 aa4.75□□□□□ -1.65
SMC4-203ENST00000462668 SH3BP5LQ7L8J4 393 aa4.75□□□□□ -1.65
SMC4-203ENST00000462668 TINF2Q9BSI4 451 aa4.75□□□□□ -1.65
SMC4-203ENST00000462668 SKIP12755 728 aa4.75□□□□□ -1.65
SMC4-203ENST00000462668 NCOA4Q13772 614 aa4.75□□□□□ -1.65
SMC4-203ENST00000462668 POTEEQ6S8J3 1075 aa4.75□□□□□ -1.65
SMC4-203ENST00000462668 POTEAQ6S8J7 498 aa4.75□□□□□ -1.65
SMC4-203ENST00000462668 SYMPKQ92797 1274 aaKnown RBP4.75□□□□□ -1.65
SMC4-203ENST00000462668 DCTN4Q9UJW0 460 aa4.75□□□□□ -1.65
SMC4-203ENST00000462668 HOXB1P14653 301 aaPredicted RBP4.74□□□□□ -1.65
SMC4-203ENST00000462668 Q3C1V9 767 aa4.74□□□□□ -1.65
SMC4-203ENST00000462668 RBCK1Q9BYM8 510 aa4.74□□□□□ -1.65
SMC4-203ENST00000462668 PCDHGA11Q9Y5H2 935 aa4.74□□□□□ -1.65
SMC4-203ENST00000462668 MSS51Q4VC12 460 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms