RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 GGCXP38435 758 aa9.15□□□□□ -0.94
VPS36-202ENST00000462289 CDK11AQ9UQ88 783 aaPredicted RBP9.15□□□□□ -0.94
VPS36-202ENST00000462289 KDM6BO15054 1643 aa9.15□□□□□ -0.94
VPS36-202ENST00000462289 ZMYM4Q5VZL5 1548 aa9.14□□□□□ -0.95
VPS36-202ENST00000462289 GPATCH8Q9UKJ3 1502 aaKnown RBP9.14□□□□□ -0.95
VPS36-202ENST00000462289 ITSN2Q9NZM3 1697 aa9.13□□□□□ -0.95
VPS36-202ENST00000462289 KDM5CP41229 1560 aa9.12□□□□□ -0.95
VPS36-202ENST00000462289 ABCC1P33527 1531 aa9.12□□□□□ -0.95
VPS36-202ENST00000462289 ARID3CA6NKF2 412 aa9.12□□□□□ -0.95
VPS36-202ENST00000462289 FANCAO15360 1455 aa9.12□□□□□ -0.95
VPS36-202ENST00000462289 SAMD9LQ8IVG5 1584 aa9.12□□□□□ -0.95
VPS36-202ENST00000462289 NCOA2Q15596 1464 aa9.11□□□□□ -0.95
VPS36-202ENST00000462289 Q6ZNB5 142 aa9.11□□□□□ -0.95
VPS36-202ENST00000462289 VSIG10Q8N0Z9 540 aa9.11□□□□□ -0.95
VPS36-202ENST00000462289 DAXXQ9UER7 740 aaPredicted RBP9.11□□□□□ -0.95
VPS36-202ENST00000462289 TLL1O43897 1013 aa9.1□□□□□ -0.95
VPS36-202ENST00000462289 RSPH4AQ5TD94 716 aa9.1□□□□□ -0.95
VPS36-202ENST00000462289 GPIHBP1Q8IV16 184 aa9.1□□□□□ -0.95
VPS36-202ENST00000462289 AKNAQ7Z591 1439 aa9.1□□□□□ -0.95
VPS36-202ENST00000462289 MTUS2Q5JR59 1369 aa9.1□□□□□ -0.95
VPS36-202ENST00000462289 KIAA1107Q9UPP5 1409 aa9.09□□□□□ -0.95
VPS36-202ENST00000462289 RNF223E7ERA6 249 aa9.09□□□□□ -0.95
VPS36-202ENST00000462289 ARHGEF12Q9NZN5 1544 aa9.09□□□□□ -0.95
VPS36-202ENST00000462289 POGZQ7Z3K3 1410 aa9.08□□□□□ -0.96
VPS36-202ENST00000462289 NRG2O14511 850 aaPredicted RBP9.08□□□□□ -0.96
VPS36-202ENST00000462289 GFRA3O60609 400 aa9.08□□□□□ -0.96
VPS36-202ENST00000462289 NR1I2O75469 434 aa9.08□□□□□ -0.96
VPS36-202ENST00000462289 PHOX2BQ99453 314 aa9.08□□□□□ -0.96
VPS36-202ENST00000462289 MBD5Q9P267 1494 aa9.08□□□□□ -0.96
VPS36-202ENST00000462289 LCE2BO14633 110 aa9.07□□□□□ -0.96
VPS36-202ENST00000462289 ADH1BP00325 375 aa9.07□□□□□ -0.96
VPS36-202ENST00000462289 KANK4Q5T7N3 995 aaPredicted RBP9.07□□□□□ -0.96
VPS36-202ENST00000462289 ANKLE1Q8NAG6 615 aa9.07□□□□□ -0.96
VPS36-202ENST00000462289 EMID1Q96A84 441 aaPredicted RBP9.07□□□□□ -0.96
VPS36-202ENST00000462289 ADGRL1O94910 1474 aa9.07□□□□□ -0.96
VPS36-202ENST00000462289 MAGI2Q86UL8 1455 aa9.07□□□□□ -0.96
VPS36-202ENST00000462289 ARHGEF5Q12774 1597 aa9.07□□□□□ -0.96
VPS36-202ENST00000462289 REREQ9P2R6 1566 aa9.07□□□□□ -0.96
VPS36-202ENST00000462289 MIA2Q96PC5 1412 aa9.06□□□□□ -0.96
VPS36-202ENST00000462289 ARHGAP5Q13017 1502 aa9.06□□□□□ -0.96
VPS36-202ENST00000462289 ARHGEF40Q8TER5 1519 aa9.06□□□□□ -0.96
VPS36-202ENST00000462289 SCUBE3Q8IX30 993 aa9.06□□□□□ -0.96
VPS36-202ENST00000462289 DENND4BO75064 1496 aaPredicted RBP9.06□□□□□ -0.96
VPS36-202ENST00000462289 PLEKHH2Q8IVE3 1493 aa9.06□□□□□ -0.96
VPS36-202ENST00000462289 KIDINS220Q9ULH0 1771 aa9.05□□□□□ -0.96
VPS36-202ENST00000462289 INO80Q9ULG1 1556 aaPredicted RBP9.05□□□□□ -0.96
VPS36-202ENST00000462289 TCOF1Q13428 1488 aaKnown RBP9.05□□□□□ -0.96
VPS36-202ENST00000462289 ZNF518AQ6AHZ1 1483 aa9.05□□□□□ -0.96
VPS36-202ENST00000462289 MLH3Q9UHC1 1453 aa9.05□□□□□ -0.96
VPS36-202ENST00000462289 S1PR4O95977 384 aa9.05□□□□□ -0.96
VPS36-202ENST00000462289 MYOM3Q5VTT5 1437 aa9.05□□□□□ -0.96
VPS36-202ENST00000462289 EFCAB2Q5VUJ9 269 aa9.04□□□□□ -0.96
VPS36-202ENST00000462289 ATP1B4Q9UN42 357 aaPredicted RBP9.04□□□□□ -0.96
VPS36-202ENST00000462289 SIGLEC1Q9BZZ2 1709 aa9.04□□□□□ -0.96
VPS36-202ENST00000462289 SYCP2Q9BX26 1530 aa9.04□□□□□ -0.96
VPS36-202ENST00000462289 SCAPERQ9BY12 1400 aa9.04□□□□□ -0.96
VPS36-202ENST00000462289 HECW2Q9P2P5 1572 aa9.03□□□□□ -0.96
VPS36-202ENST00000462289 CCNB3Q8WWL7 1395 aa9.03□□□□□ -0.96
VPS36-202ENST00000462289 PUS10Q3MIT2 529 aaKnown RBP9.03□□□□□ -0.96
VPS36-202ENST00000462289 SULF1Q8IWU6 871 aa9.03□□□□□ -0.96
VPS36-202ENST00000462289 NLRP7Q8WX94 980 aa9.03□□□□□ -0.96
VPS36-202ENST00000462289 MAST1Q9Y2H9 1570 aa9.03□□□□□ -0.96
VPS36-202ENST00000462289 CAMSAP2Q08AD1 1489 aa9.02□□□□□ -0.96
VPS36-202ENST00000462289 CROCC2H7BZ55 1655 aa9.02□□□□□ -0.97
VPS36-202ENST00000462289 DDX11L8A8MPP1 907 aa9.02□□□□□ -0.97
VPS36-202ENST00000462289 SLC19A1P41440 591 aa9.02□□□□□ -0.97
VPS36-202ENST00000462289 MORN1Q5T089 497 aa9.02□□□□□ -0.97
VPS36-202ENST00000462289 RDH13Q8NBN7 331 aa9.02□□□□□ -0.97
VPS36-202ENST00000462289 TRAPPC8Q9Y2L5 1435 aa9.02□□□□□ -0.97
VPS36-202ENST00000462289 PLXNC1O60486 1568 aa9.02□□□□□ -0.97
VPS36-202ENST00000462289 BCORL1Q5H9F3 1711 aa9.02□□□□□ -0.97
VPS36-202ENST00000462289 ZFYVE16Q7Z3T8 1539 aa9.01□□□□□ -0.97
VPS36-202ENST00000462289 PPEF1O14829 653 aaPredicted RBP9.01□□□□□ -0.97
VPS36-202ENST00000462289 GCGRP47871 477 aa9.01□□□□□ -0.97
VPS36-202ENST00000462289 MAP2K5Q13163 448 aa9.01□□□□□ -0.97
VPS36-202ENST00000462289 TRAF7Q6Q0C0 670 aa9.01□□□□□ -0.97
VPS36-202ENST00000462289 SLC6A16Q9GZN6 736 aa9.01□□□□□ -0.97
VPS36-202ENST00000462289 PDZRN3Q9UPQ7 1066 aa9.01□□□□□ -0.97
VPS36-202ENST00000462289 DIP2CQ9Y2E4 1556 aa9.01□□□□□ -0.97
VPS36-202ENST00000462289 ABCA6Q8N139 1617 aa9.01□□□□□ -0.97
VPS36-202ENST00000462289 PTPN23Q9H3S7 1636 aa9.01□□□□□ -0.97
VPS36-202ENST00000462289 RTEL1-TNFRSF6BF6WH68 1400 aa9□□□□□ -0.97
VPS36-202ENST00000462289 FGD6Q6ZV73 1430 aa9□□□□□ -0.97
VPS36-202ENST00000462289 ATP6V1AP38606 617 aa9□□□□□ -0.97
VPS36-202ENST00000462289 FUT2Q10981 343 aa9□□□□□ -0.97
VPS36-202ENST00000462289 SPRYD7Q5W111 196 aa9□□□□□ -0.97
VPS36-202ENST00000462289 TRIM67Q6ZTA4 783 aa9□□□□□ -0.97
VPS36-202ENST00000462289 THAP11Q96EK4 314 aa9□□□□□ -0.97
VPS36-202ENST00000462289 DNMT1P26358 1616 aaKnown RBP9□□□□□ -0.97
VPS36-202ENST00000462289 AGLP35573 1532 aa9□□□□□ -0.97
VPS36-202ENST00000462289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS36-202ENST00000462289 TULP1O00294 542 aaPredicted RBP8.99□□□□□ -0.97
VPS36-202ENST00000462289 ZNF598Q86UK7 904 aaKnown RBP8.99□□□□□ -0.97
VPS36-202ENST00000462289 SPSB2Q99619 263 aa8.99□□□□□ -0.97
VPS36-202ENST00000462289 SHANK2Q9UPX8 1470 aa8.99□□□□□ -0.97
VPS36-202ENST00000462289 ADGBQ8N7X0 1667 aa8.99□□□□□ -0.97
VPS36-202ENST00000462289 YEATS2Q9ULM3 1422 aa8.98□□□□□ -0.97
VPS36-202ENST00000462289 ADAMTSL3P82987 1691 aa8.98□□□□□ -0.97
VPS36-202ENST00000462289 CCDC141Q6ZP82 1450 aa8.98□□□□□ -0.97
VPS36-202ENST00000462289 RAPGEF3O95398 923 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 1567.6 ms