RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 EIF3AQ14152 1382 aaKnown RBP16.09■□□□□ 0.17
CBX3-205ENST00000462165 GPRASP1Q5JY77 1395 aa16.09■□□□□ 0.17
CBX3-205ENST00000462165 TULP4Q9NRJ4 1543 aa16.09■□□□□ 0.17
CBX3-205ENST00000462165 THSD7AQ9UPZ6 1657 aa16.08■□□□□ 0.17
CBX3-205ENST00000462165 PSDA5PKW4 1024 aaPredicted RBP16.07■□□□□ 0.16
CBX3-205ENST00000462165 HRCP23327 699 aa16.07■□□□□ 0.16
CBX3-205ENST00000462165 PRR36Q9H6K5 1346 aa16.07■□□□□ 0.16
CBX3-205ENST00000462165 TNS1Q9HBL0 1735 aaKnown RBP16.07■□□□□ 0.16
CBX3-205ENST00000462165 SPATA31A5Q5VU36 1347 aa16.06■□□□□ 0.16
CBX3-205ENST00000462165 SPATA31A7Q8IWB4 1347 aa16.06■□□□□ 0.16
CBX3-205ENST00000462165 HIRIP3Q9BW71 556 aaPredicted RBP16.06■□□□□ 0.16
CBX3-205ENST00000462165 ITSN1Q15811 1721 aa16.05■□□□□ 0.16
CBX3-205ENST00000462165 DISP2A7MBM2 1401 aa16.05■□□□□ 0.16
CBX3-205ENST00000462165 EN1Q05925 392 aaPredicted RBP16.05■□□□□ 0.16
CBX3-205ENST00000462165 TRAK1Q9UPV9 953 aa16.05■□□□□ 0.16
CBX3-205ENST00000462165 MINK1Q8N4C8 1332 aaPredicted RBP16.04■□□□□ 0.16
CBX3-205ENST00000462165 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
CBX3-205ENST00000462165 PHRF1Q9P1Y6 1649 aaKnown RBP16.02■□□□□ 0.16
CBX3-205ENST00000462165 FAM182BQ5T319 152 aa16.02■□□□□ 0.16
CBX3-205ENST00000462165 ARHGEF28Q8N1W1 1705 aaKnown RBP16.02■□□□□ 0.15
CBX3-205ENST00000462165 NGDNQ8NEJ9 315 aaKnown RBP16.01■□□□□ 0.15
CBX3-205ENST00000462165 PRDM11Q9NQV5 511 aa16.01■□□□□ 0.15
CBX3-205ENST00000462165 ATP7BP35670 1465 aa16■□□□□ 0.15
CBX3-205ENST00000462165 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
CBX3-205ENST00000462165 SPATA31A1Q5TZJ5 1347 aa15.99■□□□□ 0.15
CBX3-205ENST00000462165 R3HDM1Q15032 1099 aaKnown RBP15.99■□□□□ 0.15
CBX3-205ENST00000462165 KIAA0232Q92628 1395 aa15.99■□□□□ 0.15
CBX3-205ENST00000462165 EZH2Q15910 746 aaKnown RBP15.98■□□□□ 0.15
CBX3-205ENST00000462165 STAC3Q96MF2 364 aa15.98■□□□□ 0.15
CBX3-205ENST00000462165 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
CBX3-205ENST00000462165 FAM196AQ6ZSG2 479 aa15.97■□□□□ 0.15
CBX3-205ENST00000462165 DCAF11Q8TEB1 546 aa15.97■□□□□ 0.15
CBX3-205ENST00000462165 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
CBX3-205ENST00000462165 TOPAZ1Q8N9V7 1692 aa15.96■□□□□ 0.15
CBX3-205ENST00000462165 RREB1Q92766 1687 aa15.96■□□□□ 0.15
CBX3-205ENST00000462165 NUDT16Q96DE0 195 aaKnown RBP15.96■□□□□ 0.15
CBX3-205ENST00000462165 CAMKK2Q96RR4 588 aa15.96■□□□□ 0.15
CBX3-205ENST00000462165 TRIM37O94972 964 aa15.95■□□□□ 0.14
CBX3-205ENST00000462165 CHRNA2Q15822 529 aa15.95■□□□□ 0.14
CBX3-205ENST00000462165 PARD3Q8TEW0 1356 aa15.95■□□□□ 0.14
CBX3-205ENST00000462165 STRN4Q9NRL3 753 aa15.94■□□□□ 0.14
CBX3-205ENST00000462165 POLR3AO14802 1390 aaPredicted RBP15.94■□□□□ 0.14
CBX3-205ENST00000462165 NRKQ7Z2Y5 1582 aa15.93■□□□□ 0.14
CBX3-205ENST00000462165 BARGINQ6ZT62 677 aa15.93■□□□□ 0.14
CBX3-205ENST00000462165 NUP188Q5SRE5 1749 aa15.93■□□□□ 0.14
CBX3-205ENST00000462165 SSH2Q76I76 1423 aa15.93■□□□□ 0.14
CBX3-205ENST00000462165 LMO7Q8WWI1 1683 aa15.92■□□□□ 0.14
CBX3-205ENST00000462165 ZC3H6P61129 1189 aaKnown RBP15.92■□□□□ 0.14
CBX3-205ENST00000462165 APBA3O96018 575 aa15.91■□□□□ 0.14
CBX3-205ENST00000462165 CAMTA1Q9Y6Y1 1673 aa15.91■□□□□ 0.14
CBX3-205ENST00000462165 ACEP12821 1306 aa15.91■□□□□ 0.14
CBX3-205ENST00000462165 NBPF8Q3BBV2 869 aa15.9■□□□□ 0.14
CBX3-205ENST00000462165 NUTM2GQ5VZR2 741 aa15.9■□□□□ 0.14
CBX3-205ENST00000462165 CDK19Q9BWU1 502 aa15.9■□□□□ 0.14
CBX3-205ENST00000462165 KIAA1210Q9ULL0 1709 aa15.9■□□□□ 0.14
CBX3-205ENST00000462165 CPDO75976 1380 aa15.89■□□□□ 0.13
CBX3-205ENST00000462165 PARP4Q9UKK3 1724 aaKnown RBP15.89■□□□□ 0.13
CBX3-205ENST00000462165 EVA1CP58658 441 aa15.89■□□□□ 0.13
CBX3-205ENST00000462165 PDE3BQ13370 1112 aa15.89■□□□□ 0.13
CBX3-205ENST00000462165 USP35Q9P2H5 1018 aa15.89■□□□□ 0.13
CBX3-205ENST00000462165 CCDC61Q9Y6R9 512 aa15.89■□□□□ 0.13
CBX3-205ENST00000462165 PLEKHG3A1L390 1219 aa15.88■□□□□ 0.13
CBX3-205ENST00000462165 LARP1Q6PKG0 1096 aaKnown RBP15.87■□□□□ 0.13
CBX3-205ENST00000462165 TCP11L2Q8N4U5 519 aa15.87■□□□□ 0.13
CBX3-205ENST00000462165 THRAP3Q9Y2W1 955 aaKnown RBP15.87■□□□□ 0.13
CBX3-205ENST00000462165 USP19O94966 1318 aa15.87■□□□□ 0.13
CBX3-205ENST00000462165 ABTB2Q8N961 1025 aa15.86■□□□□ 0.13
CBX3-205ENST00000462165 NBPF14Q5TI25 921 aa15.85■□□□□ 0.13
CBX3-205ENST00000462165 RGPD3A6NKT7 1758 aaPredicted RBP15.85■□□□□ 0.13
CBX3-205ENST00000462165 RGPD4Q7Z3J3 1758 aa15.85■□□□□ 0.13
CBX3-205ENST00000462165 SBF2Q86WG5 1849 aa15.84■□□□□ 0.13
CBX3-205ENST00000462165 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
CBX3-205ENST00000462165 COL5A2P05997 1499 aaPredicted RBP15.84■□□□□ 0.13
CBX3-205ENST00000462165 PEAK1Q9H792 1746 aa15.83■□□□□ 0.13
CBX3-205ENST00000462165 C11orf95C9JLR9 678 aaPredicted RBP15.83■□□□□ 0.12
CBX3-205ENST00000462165 GCP02774 474 aa15.83■□□□□ 0.12
CBX3-205ENST00000462165 NLRP13Q86W25 1043 aa15.83■□□□□ 0.12
CBX3-205ENST00000462165 BRD4O60885 1362 aaPredicted RBP15.82■□□□□ 0.12
CBX3-205ENST00000462165 CRB1P82279 1406 aa15.81■□□□□ 0.12
CBX3-205ENST00000462165 PPIP5K1Q6PFW1 1433 aa15.81■□□□□ 0.12
CBX3-205ENST00000462165 OVOS2A0A0G2JMS6 1433 aa15.8■□□□□ 0.12
CBX3-205ENST00000462165 OVOS2A0A0J9YW53 1432 aa15.8■□□□□ 0.12
CBX3-205ENST00000462165 OVOS2Q6IE36 1432 aa15.8■□□□□ 0.12
CBX3-205ENST00000462165 WNK3Q9BYP7 1800 aa15.8■□□□□ 0.12
CBX3-205ENST00000462165 LRRC37A3O60309 1634 aa15.79■□□□□ 0.12
CBX3-205ENST00000462165 KCNQ2O43526 872 aa15.79■□□□□ 0.12
CBX3-205ENST00000462165 SPON1Q9HCB6 807 aa15.79■□□□□ 0.12
CBX3-205ENST00000462165 SLIT3O75094 1523 aa15.78■□□□□ 0.12
CBX3-205ENST00000462165 AATKQ6ZMQ8 1374 aa15.78■□□□□ 0.12
CBX3-205ENST00000462165 COL18A1P39060 1754 aa15.78■□□□□ 0.12
CBX3-205ENST00000462165 YY1P25490 414 aa15.78■□□□□ 0.12
CBX3-205ENST00000462165 SRPK2P78362 688 aaKnown RBP15.78■□□□□ 0.12
CBX3-205ENST00000462165 NBPF1Q3BBV0 1214 aa15.78■□□□□ 0.12
CBX3-205ENST00000462165 QRICH2Q9H0J4 1663 aa15.78■□□□□ 0.12
CBX3-205ENST00000462165 CENPJQ9HC77 1338 aaPredicted RBP15.77■□□□□ 0.12
CBX3-205ENST00000462165 PLSCR1O15162 318 aa15.77■□□□□ 0.12
CBX3-205ENST00000462165 PPP1R1BQ9UD71 204 aaPredicted RBP15.77■□□□□ 0.12
CBX3-205ENST00000462165 CASZ1Q86V15 1759 aa15.77■□□□□ 0.11
CBX3-205ENST00000462165 USP6P35125 1406 aa15.77■□□□□ 0.11
CBX3-205ENST00000462165 NINLQ9Y2I6 1382 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms