RNA–Protein interactions for RNA: ENST00000461801.1

FXR1-205, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 410 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-205ENST00000461801 SKIP12755 728 aa9.24□□□□□ -0.93
FXR1-205ENST00000461801 ELOAQ14241 798 aaKnown RBP9.24□□□□□ -0.93
FXR1-205ENST00000461801 USP17L2Q6R6M4 530 aa9.24□□□□□ -0.93
FXR1-205ENST00000461801 USP17L1Q7RTZ2 530 aa9.24□□□□□ -0.93
FXR1-205ENST00000461801 DEPDC4Q8N2C3 294 aa9.24□□□□□ -0.93
FXR1-205ENST00000461801 USP17L5A8MUK1 530 aa9.23□□□□□ -0.93
FXR1-205ENST00000461801 MRPL50Q8N5N7 158 aaKnown RBP9.23□□□□□ -0.93
FXR1-205ENST00000461801 NFATC2IPQ8NCF5 419 aa9.23□□□□□ -0.93
FXR1-205ENST00000461801 OTUD5Q96G74 571 aa9.23□□□□□ -0.93
FXR1-205ENST00000461801 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.23□□□□□ -0.93
FXR1-205ENST00000461801 ZNF687Q8N1G0 1237 aa9.22□□□□□ -0.93
FXR1-205ENST00000461801 THAP11Q96EK4 314 aa9.22□□□□□ -0.93
FXR1-205ENST00000461801 NOVA2Q9UNW9 492 aaKnown RBP9.22□□□□□ -0.93
FXR1-205ENST00000461801 GNEQ9Y223 722 aaKnown RBP9.22□□□□□ -0.93
FXR1-205ENST00000461801 JUNDP17535 347 aa9.21□□□□□ -0.94
FXR1-205ENST00000461801 APLP1P51693 650 aa9.21□□□□□ -0.94
FXR1-205ENST00000461801 SCUBE3Q8IX30 993 aa9.21□□□□□ -0.94
FXR1-205ENST00000461801 SALL2Q9Y467 1007 aaPredicted RBP9.21□□□□□ -0.94
FXR1-205ENST00000461801 PTPRNQ16849 979 aa9.2□□□□□ -0.94
FXR1-205ENST00000461801 CRTC2Q53ET0 693 aaPredicted RBP9.2□□□□□ -0.94
FXR1-205ENST00000461801 PHLDB3Q6NSJ2 640 aa9.2□□□□□ -0.94
FXR1-205ENST00000461801 PLEKHM2Q8IWE5 1019 aa9.2□□□□□ -0.94
FXR1-205ENST00000461801 MARVELD3Q96A59 401 aa9.2□□□□□ -0.94
FXR1-205ENST00000461801 SLAIN2Q9P270 581 aa9.2□□□□□ -0.94
FXR1-205ENST00000461801 ZC3H4Q9UPT8 1303 aaKnown RBP9.2□□□□□ -0.94
FXR1-205ENST00000461801 TK2O00142 265 aa9.19□□□□□ -0.94
FXR1-205ENST00000461801 CTHP32929 405 aa9.19□□□□□ -0.94
FXR1-205ENST00000461801 OCSTAMPQ9BR26 566 aa9.19□□□□□ -0.94
FXR1-205ENST00000461801 PRR14Q9BWN1 585 aa9.19□□□□□ -0.94
FXR1-205ENST00000461801 FAM205CA6NFA0 338 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 USP17L15C9J2P7 530 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 USP17L10C9JJH3 530 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 USP17L13C9JLJ4 530 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 USP17L12C9JPN9 530 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 USP17L11C9JVI0 530 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 USP17L21D6R901 530 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 USP17L18D6R9N7 530 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 USP17L22D6RA61 530 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 USP17L17D6RBQ6 530 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 USP17L19D6RCP7 530 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 USP17L20D6RJB6 530 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 FMNL1O95466 1100 aaPredicted RBP9.18□□□□□ -0.94
FXR1-205ENST00000461801 EMP3P54852 163 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 USP17L24Q0WX57 530 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 B4GALNT3Q6L9W6 998 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 TXNDC2Q86VQ3 553 aa9.18□□□□□ -0.94
FXR1-205ENST00000461801 MKRN1Q9UHC7 482 aaKnown RBP9.18□□□□□ -0.94
FXR1-205ENST00000461801 FAM196BA6NMK8 535 aa9.17□□□□□ -0.94
FXR1-205ENST00000461801 ST18O60284 1047 aa9.17□□□□□ -0.94
FXR1-205ENST00000461801 NCOA4Q13772 614 aa9.17□□□□□ -0.94
FXR1-205ENST00000461801 CEP126Q9P2H0 1117 aa9.17□□□□□ -0.94
FXR1-205ENST00000461801 BCAMP50895 628 aa9.16□□□□□ -0.94
FXR1-205ENST00000461801 PPP4CP60510 307 aa9.16□□□□□ -0.94
FXR1-205ENST00000461801 ADGRD1Q6QNK2 874 aa9.16□□□□□ -0.94
FXR1-205ENST00000461801 PHTF2Q8N3S3 785 aa9.16□□□□□ -0.94
FXR1-205ENST00000461801 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
FXR1-205ENST00000461801 PCDHB3Q9Y5E6 796 aa9.16□□□□□ -0.94
FXR1-205ENST00000461801 POTEB3A0JP26 581 aa9.15□□□□□ -0.94
FXR1-205ENST00000461801 SSFA2P28290 1259 aa9.15□□□□□ -0.94
FXR1-205ENST00000461801 FAM69CQ0P6D2 419 aa9.15□□□□□ -0.94
FXR1-205ENST00000461801 PTK7Q13308 1070 aa9.15□□□□□ -0.94
FXR1-205ENST00000461801 POTEBQ6S5H4 581 aa9.15□□□□□ -0.94
FXR1-205ENST00000461801 AMOTL2Q9Y2J4 779 aa9.15□□□□□ -0.94
FXR1-205ENST00000461801 PCDHB9Q9Y5E1 797 aa9.15□□□□□ -0.94
FXR1-205ENST00000461801 SOWAHBA6NEL2 793 aa9.14□□□□□ -0.95
FXR1-205ENST00000461801 E9PSI1 815 aa9.14□□□□□ -0.95
FXR1-205ENST00000461801 HRO43593 1189 aa9.14□□□□□ -0.95
FXR1-205ENST00000461801 NR1I2O75469 434 aa9.14□□□□□ -0.95
FXR1-205ENST00000461801 RASA1P20936 1047 aa9.14□□□□□ -0.95
FXR1-205ENST00000461801 KCNH2Q12809 1159 aa9.14□□□□□ -0.95
FXR1-205ENST00000461801 SLFNL1Q499Z3 407 aa9.14□□□□□ -0.95
FXR1-205ENST00000461801 PDXDC2PQ6P474 469 aa9.14□□□□□ -0.95
FXR1-205ENST00000461801 RNF135Q8IUD6 432 aa9.14□□□□□ -0.95
FXR1-205ENST00000461801 PLPP7Q8NBV4 271 aa9.14□□□□□ -0.95
FXR1-205ENST00000461801 ANKK1Q8NFD2 765 aa9.14□□□□□ -0.95
FXR1-205ENST00000461801 CCER1Q8TC90 406 aaPredicted RBP9.14□□□□□ -0.95
FXR1-205ENST00000461801 CCNYL3P0C7X3 344 aa9.13□□□□□ -0.95
FXR1-205ENST00000461801 PTK2Q05397 1052 aa9.13□□□□□ -0.95
FXR1-205ENST00000461801 LARP1Q6PKG0 1096 aaKnown RBP9.13□□□□□ -0.95
FXR1-205ENST00000461801 FAM160A2Q8N612 972 aaPredicted RBP9.13□□□□□ -0.95
FXR1-205ENST00000461801 NUDT12Q9BQG2 462 aa9.13□□□□□ -0.95
FXR1-205ENST00000461801 PRDM9Q9NQV7 894 aa9.13□□□□□ -0.95
FXR1-205ENST00000461801 EVA1BQ9NVM1 165 aa9.13□□□□□ -0.95
FXR1-205ENST00000461801 GPSM3Q9Y4H4 160 aa9.13□□□□□ -0.95
FXR1-205ENST00000461801 DXOO77932 396 aaKnown RBP9.12□□□□□ -0.95
FXR1-205ENST00000461801 MSS51Q4VC12 460 aa9.12□□□□□ -0.95
FXR1-205ENST00000461801 TSR3Q9UJK0 312 aaKnown RBP9.12□□□□□ -0.95
FXR1-205ENST00000461801 ATP5J2-PTCD1G3V325 749 aa9.11□□□□□ -0.95
FXR1-205ENST00000461801 LSM11P83369 360 aaKnown RBP eCLIP9.11□□□□□ -0.95
FXR1-205ENST00000461801 TSGA10IPQ3SY00 556 aa9.11□□□□□ -0.95
FXR1-205ENST00000461801 ANKMY2Q8IV38 441 aa9.11□□□□□ -0.95
FXR1-205ENST00000461801 ADAM32Q8TC27 787 aa9.11□□□□□ -0.95
FXR1-205ENST00000461801 FAM200AQ8TCP9 573 aa9.11□□□□□ -0.95
FXR1-205ENST00000461801 CLP1Q92989 425 aaKnown RBP9.11□□□□□ -0.95
FXR1-205ENST00000461801 HS3ST6Q96QI5 342 aa9.11□□□□□ -0.95
FXR1-205ENST00000461801 SCNN1AP37088 669 aa9.1□□□□□ -0.95
FXR1-205ENST00000461801 GPKOWQ92917 476 aaPredicted RBP eCLIP9.1□□□□□ -0.95
FXR1-205ENST00000461801 CHIC2Q9UKJ5 165 aa9.1□□□□□ -0.95
FXR1-205ENST00000461801 GOLGA8CPA6NN73 597 aa9.09□□□□□ -0.95
FXR1-205ENST00000461801 ARID4AP29374 1257 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms