RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 PMFBP1Q8TBY8 1022 aa17.45■□□□□ 0.38
PCYT1A-213ENST00000460827 ANKARQ7Z5J8 1434 aa17.45■□□□□ 0.38
PCYT1A-213ENST00000460827 SPATA31A5Q5VU36 1347 aa17.45■□□□□ 0.38
PCYT1A-213ENST00000460827 SPATA31A7Q8IWB4 1347 aa17.45■□□□□ 0.38
PCYT1A-213ENST00000460827 SAFB2Q14151 953 aaKnown RBP eCLIP17.44■□□□□ 0.38
PCYT1A-213ENST00000460827 PRAM1Q96QH2 718 aa17.44■□□□□ 0.38
PCYT1A-213ENST00000460827 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
PCYT1A-213ENST00000460827 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
PCYT1A-213ENST00000460827 CRYBG1Q9Y4K1 1723 aa17.44■□□□□ 0.38
PCYT1A-213ENST00000460827 CFAP70Q5T0N1 1121 aa17.43■□□□□ 0.38
PCYT1A-213ENST00000460827 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
PCYT1A-213ENST00000460827 ADGRB2O60241 1585 aa17.42■□□□□ 0.38
PCYT1A-213ENST00000460827 EZH2Q15910 746 aaKnown RBP17.41■□□□□ 0.38
PCYT1A-213ENST00000460827 MPHOSPH9Q99550 1183 aa17.41■□□□□ 0.38
PCYT1A-213ENST00000460827 DLC1Q96QB1 1528 aa17.41■□□□□ 0.38
PCYT1A-213ENST00000460827 CAMKK2Q96RR4 588 aa17.4■□□□□ 0.38
PCYT1A-213ENST00000460827 ACIN1Q9UKV3 1341 aaKnown RBP17.39■□□□□ 0.37
PCYT1A-213ENST00000460827 PRR36Q9H6K5 1346 aa17.38■□□□□ 0.37
PCYT1A-213ENST00000460827 TRIM37O94972 964 aa17.37■□□□□ 0.37
PCYT1A-213ENST00000460827 UTRNP46939 3433 aa17.37■□□□□ 0.37
PCYT1A-213ENST00000460827 GPRASP1Q5JY77 1395 aa17.37■□□□□ 0.37
PCYT1A-213ENST00000460827 POGKQ9P215 609 aa17.36■□□□□ 0.37
PCYT1A-213ENST00000460827 SPATA31A1Q5TZJ5 1347 aa17.36■□□□□ 0.37
PCYT1A-213ENST00000460827 ADGRB1O14514 1584 aa17.36■□□□□ 0.37
PCYT1A-213ENST00000460827 RREB1Q92766 1687 aa17.36■□□□□ 0.37
PCYT1A-213ENST00000460827 FAM196AQ6ZSG2 479 aa17.35■□□□□ 0.37
PCYT1A-213ENST00000460827 HIRIP3Q9BW71 556 aaPredicted RBP17.35■□□□□ 0.37
PCYT1A-213ENST00000460827 PRDM11Q9NQV5 511 aa17.35■□□□□ 0.37
PCYT1A-213ENST00000460827 PARD3Q8TEW0 1356 aa17.34■□□□□ 0.37
PCYT1A-213ENST00000460827 TULP4Q9NRJ4 1543 aa17.34■□□□□ 0.37
PCYT1A-213ENST00000460827 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.37
PCYT1A-213ENST00000460827 KIAA0232Q92628 1395 aa17.32■□□□□ 0.36
PCYT1A-213ENST00000460827 APBA3O96018 575 aa17.32■□□□□ 0.36
PCYT1A-213ENST00000460827 YY1P25490 414 aa17.32■□□□□ 0.36
PCYT1A-213ENST00000460827 EIF3AQ14152 1382 aaKnown RBP17.31■□□□□ 0.36
PCYT1A-213ENST00000460827 MINK1Q8N4C8 1332 aaPredicted RBP17.31■□□□□ 0.36
PCYT1A-213ENST00000460827 PHRF1Q9P1Y6 1649 aaKnown RBP17.31■□□□□ 0.36
PCYT1A-213ENST00000460827 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
PCYT1A-213ENST00000460827 PAK3O75914 559 aaPredicted RBP17.3■□□□□ 0.36
PCYT1A-213ENST00000460827 CHRNA2Q15822 529 aa17.3■□□□□ 0.36
PCYT1A-213ENST00000460827 TRAK1Q9UPV9 953 aa17.3■□□□□ 0.36
PCYT1A-213ENST00000460827 NGDNQ8NEJ9 315 aaKnown RBP17.29■□□□□ 0.36
PCYT1A-213ENST00000460827 STRN4Q9NRL3 753 aa17.29■□□□□ 0.36
PCYT1A-213ENST00000460827 BARGINQ6ZT62 677 aa17.27■□□□□ 0.36
PCYT1A-213ENST00000460827 ATP7BP35670 1465 aa17.26■□□□□ 0.35
PCYT1A-213ENST00000460827 ITSN1Q15811 1721 aa17.26■□□□□ 0.35
PCYT1A-213ENST00000460827 SSH2Q76I76 1423 aa17.25■□□□□ 0.35
PCYT1A-213ENST00000460827 ZC3H6P61129 1189 aaKnown RBP17.25■□□□□ 0.35
PCYT1A-213ENST00000460827 USP35Q9P2H5 1018 aa17.25■□□□□ 0.35
PCYT1A-213ENST00000460827 CAMTA1Q9Y6Y1 1673 aa17.24■□□□□ 0.35
PCYT1A-213ENST00000460827 PDE3BQ13370 1112 aa17.24■□□□□ 0.35
PCYT1A-213ENST00000460827 NBPF8Q3BBV2 869 aa17.23■□□□□ 0.35
PCYT1A-213ENST00000460827 NBPF14Q5TI25 921 aa17.23■□□□□ 0.35
PCYT1A-213ENST00000460827 SPON1Q9HCB6 807 aa17.23■□□□□ 0.35
PCYT1A-213ENST00000460827 LMO7Q8WWI1 1683 aa17.23■□□□□ 0.35
PCYT1A-213ENST00000460827 NUTM2GQ5VZR2 741 aa17.22■□□□□ 0.35
PCYT1A-213ENST00000460827 NUDT16Q96DE0 195 aaKnown RBP17.22■□□□□ 0.35
PCYT1A-213ENST00000460827 NRKQ7Z2Y5 1582 aa17.22■□□□□ 0.35
PCYT1A-213ENST00000460827 ARHGEF28Q8N1W1 1705 aaKnown RBP17.21■□□□□ 0.35
PCYT1A-213ENST00000460827 NINLQ9Y2I6 1382 aa17.21■□□□□ 0.35
PCYT1A-213ENST00000460827 KCNQ2O43526 872 aa17.21■□□□□ 0.35
PCYT1A-213ENST00000460827 LARP1Q6PKG0 1096 aaKnown RBP17.21■□□□□ 0.35
PCYT1A-213ENST00000460827 KCNA4P22459 653 aa17.2■□□□□ 0.34
PCYT1A-213ENST00000460827 EVA1CP58658 441 aa17.2■□□□□ 0.34
PCYT1A-213ENST00000460827 TCP11L2Q8N4U5 519 aa17.2■□□□□ 0.34
PCYT1A-213ENST00000460827 PPP1R1BQ9UD71 204 aaPredicted RBP17.2■□□□□ 0.34
PCYT1A-213ENST00000460827 PARP4Q9UKK3 1724 aaKnown RBP17.2■□□□□ 0.34
PCYT1A-213ENST00000460827 CEP350Q5VT06 3117 aa17.2■□□□□ 0.34
PCYT1A-213ENST00000460827 POLR3AO14802 1390 aaPredicted RBP17.19■□□□□ 0.34
PCYT1A-213ENST00000460827 CPDO75976 1380 aa17.19■□□□□ 0.34
PCYT1A-213ENST00000460827 TOPAZ1Q8N9V7 1692 aa17.19■□□□□ 0.34
PCYT1A-213ENST00000460827 SBF2Q86WG5 1849 aa17.19■□□□□ 0.34
PCYT1A-213ENST00000460827 PEAK1Q9H792 1746 aa17.18■□□□□ 0.34
PCYT1A-213ENST00000460827 GOLGB1Q14789 3259 aaKnown RBP17.18■□□□□ 0.34
PCYT1A-213ENST00000460827 RGPD3A6NKT7 1758 aaPredicted RBP17.18■□□□□ 0.34
PCYT1A-213ENST00000460827 RGPD4Q7Z3J3 1758 aa17.18■□□□□ 0.34
PCYT1A-213ENST00000460827 C1QBPQ07021 282 aaKnown RBP17.17■□□□□ 0.34
PCYT1A-213ENST00000460827 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
PCYT1A-213ENST00000460827 THRAP3Q9Y2W1 955 aaKnown RBP17.17■□□□□ 0.34
PCYT1A-213ENST00000460827 CASZ1Q86V15 1759 aa17.17■□□□□ 0.34
PCYT1A-213ENST00000460827 USP19O94966 1318 aa17.17■□□□□ 0.34
PCYT1A-213ENST00000460827 ACEP12821 1306 aa17.17■□□□□ 0.34
PCYT1A-213ENST00000460827 DCAF11Q8TEB1 546 aa17.15■□□□□ 0.34
PCYT1A-213ENST00000460827 CDK19Q9BWU1 502 aa17.15■□□□□ 0.34
PCYT1A-213ENST00000460827 COL5A2P05997 1499 aaPredicted RBP17.14■□□□□ 0.33
PCYT1A-213ENST00000460827 PLEKHG3A1L390 1219 aa17.14■□□□□ 0.33
PCYT1A-213ENST00000460827 ANO8Q9HCE9 1232 aaPredicted RBP17.14■□□□□ 0.33
PCYT1A-213ENST00000460827 ABTB2Q8N961 1025 aa17.13■□□□□ 0.33
PCYT1A-213ENST00000460827 CCDC61Q9Y6R9 512 aa17.13■□□□□ 0.33
PCYT1A-213ENST00000460827 OVOS2A0A0G2JMS6 1433 aa17.13■□□□□ 0.33
PCYT1A-213ENST00000460827 OVOS2A0A0J9YW53 1432 aa17.13■□□□□ 0.33
PCYT1A-213ENST00000460827 OVOS2Q6IE36 1432 aa17.13■□□□□ 0.33
PCYT1A-213ENST00000460827 C11orf95C9JLR9 678 aaPredicted RBP17.12■□□□□ 0.33
PCYT1A-213ENST00000460827 PLSCR1O15162 318 aa17.12■□□□□ 0.33
PCYT1A-213ENST00000460827 PDGFDQ9GZP0 370 aaPredicted RBP17.12■□□□□ 0.33
PCYT1A-213ENST00000460827 LRRC37A3O60309 1634 aa17.11■□□□□ 0.33
PCYT1A-213ENST00000460827 GCP02774 474 aa17.11■□□□□ 0.33
PCYT1A-213ENST00000460827 PTF1AQ7RTS3 328 aa17.11■□□□□ 0.33
PCYT1A-213ENST00000460827 CRB1P82279 1406 aa17.11■□□□□ 0.33
PCYT1A-213ENST00000460827 STAC3Q96MF2 364 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms