RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 KDM5AP29375 1690 aaKnown RBP19.61■□□□□ 0.73
SSR4-206ENST00000460616 MYOM2P54296 1465 aa19.6■□□□□ 0.73
SSR4-206ENST00000460616 ZNF142P52746 1687 aaPredicted RBP19.59■□□□□ 0.73
SSR4-206ENST00000460616 WWC1Q8IX03 1113 aa19.59■□□□□ 0.73
SSR4-206ENST00000460616 RWDD1Q9H446 243 aaPredicted RBP19.59■□□□□ 0.73
SSR4-206ENST00000460616 NPC1L1Q9UHC9 1359 aa19.59■□□□□ 0.73
SSR4-206ENST00000460616 C22orf23Q9BZE7 217 aa19.59■□□□□ 0.73
SSR4-206ENST00000460616 ISY1Q9ULR0 285 aaKnown RBP19.58■□□□□ 0.73
SSR4-206ENST00000460616 DDX11L8A8MPP1 907 aa19.57■□□□□ 0.72
SSR4-206ENST00000460616 RIMS2Q9UQ26 1411 aa19.57■□□□□ 0.72
SSR4-206ENST00000460616 RARSP54136 660 aaKnown RBP19.57■□□□□ 0.72
SSR4-206ENST00000460616 ZFYVE9O95405 1425 aa19.56■□□□□ 0.72
SSR4-206ENST00000460616 NRXN1Q9ULB1 1477 aa19.56■□□□□ 0.72
SSR4-206ENST00000460616 TRIM44Q96DX7 344 aaPredicted RBP19.56■□□□□ 0.72
SSR4-206ENST00000460616 RLBP1P12271 317 aa19.55■□□□□ 0.72
SSR4-206ENST00000460616 ERBB4Q15303 1308 aa19.55■□□□□ 0.72
SSR4-206ENST00000460616 RPGRIP1LQ68CZ1 1315 aa19.55■□□□□ 0.72
SSR4-206ENST00000460616 MFAP1P55081 439 aaKnown RBP19.53■□□□□ 0.72
SSR4-206ENST00000460616 TMEM2Q9UHN6 1383 aa19.53■□□□□ 0.72
SSR4-206ENST00000460616 TNNQ9UQP3 1299 aa19.52■□□□□ 0.72
SSR4-206ENST00000460616 CFAP70Q5T0N1 1121 aa19.51■□□□□ 0.71
SSR4-206ENST00000460616 HSCBQ8IWL3 235 aa19.51■□□□□ 0.71
SSR4-206ENST00000460616 IQGAP1P46940 1657 aa19.5■□□□□ 0.71
SSR4-206ENST00000460616 LTKP29376 864 aa19.5■□□□□ 0.71
SSR4-206ENST00000460616 NEUROD2Q15784 382 aa19.5■□□□□ 0.71
SSR4-206ENST00000460616 NRXN3Q9Y4C0 1643 aa19.5■□□□□ 0.71
SSR4-206ENST00000460616 SLIT1O75093 1534 aa19.5■□□□□ 0.71
SSR4-206ENST00000460616 VGFO15240 615 aaPredicted RBP19.49■□□□□ 0.71
SSR4-206ENST00000460616 TPM2P07951 284 aa19.49■□□□□ 0.71
SSR4-206ENST00000460616 ZNF692Q9BU19 519 aaPredicted RBP19.49■□□□□ 0.71
SSR4-206ENST00000460616 KIAA1210Q9ULL0 1709 aa19.49■□□□□ 0.71
SSR4-206ENST00000460616 ARHGAP23Q9P227 1491 aa19.49■□□□□ 0.71
SSR4-206ENST00000460616 BCL2L13Q9BXK5 485 aa19.49■□□□□ 0.71
SSR4-206ENST00000460616 SETD1AO15047 1707 aaKnown RBP19.47■□□□□ 0.71
SSR4-206ENST00000460616 THEMISQ8N1K5 641 aaPredicted RBP19.47■□□□□ 0.71
SSR4-206ENST00000460616 SCAF11Q99590 1463 aaKnown RBP19.46■□□□□ 0.71
SSR4-206ENST00000460616 GAS2L3Q86XJ1 694 aa19.46■□□□□ 0.71
SSR4-206ENST00000460616 STAC3Q96MF2 364 aa19.46■□□□□ 0.71
SSR4-206ENST00000460616 PDCL3Q9H2J4 239 aa19.46■□□□□ 0.71
SSR4-206ENST00000460616 RRP7AQ9Y3A4 280 aaKnown RBP19.46■□□□□ 0.71
SSR4-206ENST00000460616 TXNDC2Q86VQ3 553 aa19.45■□□□□ 0.7
SSR4-206ENST00000460616 DDIT3P35638 169 aa19.45■□□□□ 0.7
SSR4-206ENST00000460616 ALKQ9UM73 1620 aa19.45■□□□□ 0.7
SSR4-206ENST00000460616 MVPQ14764 893 aaKnown RBP19.44■□□□□ 0.7
SSR4-206ENST00000460616 TMEM132EQ6IEE7 984 aa19.44■□□□□ 0.7
SSR4-206ENST00000460616 TNPO1Q92973 898 aaKnown RBP19.44■□□□□ 0.7
SSR4-206ENST00000460616 ADGRB1O14514 1584 aa19.44■□□□□ 0.7
SSR4-206ENST00000460616 SKOR2Q2VWA4 1001 aaPredicted RBP19.44■□□□□ 0.7
SSR4-206ENST00000460616 RUNDC1Q96C34 613 aa19.44■□□□□ 0.7
SSR4-206ENST00000460616 CARD14Q9BXL6 1004 aa19.44■□□□□ 0.7
SSR4-206ENST00000460616 WDR63Q8IWG1 891 aa19.43■□□□□ 0.7
SSR4-206ENST00000460616 GBP4Q96PP9 640 aa19.43■□□□□ 0.7
SSR4-206ENST00000460616 C14orf93Q9H972 538 aaKnown RBP19.43■□□□□ 0.7
SSR4-206ENST00000460616 POLR3AO14802 1390 aaPredicted RBP19.43■□□□□ 0.7
SSR4-206ENST00000460616 HSPA2P54652 639 aa19.42■□□□□ 0.7
SSR4-206ENST00000460616 TCP11L2Q8N4U5 519 aa19.42■□□□□ 0.7
SSR4-206ENST00000460616 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.42■□□□□ 0.7
SSR4-206ENST00000460616 LMTK3Q96Q04 1460 aa19.42■□□□□ 0.7
SSR4-206ENST00000460616 SETBP1Q9Y6X0 1596 aa19.41■□□□□ 0.7
SSR4-206ENST00000460616 NCOA3Q9Y6Q9 1424 aa19.41■□□□□ 0.7
SSR4-206ENST00000460616 SNX21Q969T3 373 aa19.41■□□□□ 0.7
SSR4-206ENST00000460616 KIAA1211Q6ZU35 1233 aa19.4■□□□□ 0.7
SSR4-206ENST00000460616 FTSJ3Q8IY81 847 aaKnown RBP19.4■□□□□ 0.7
SSR4-206ENST00000460616 CIZ1Q9ULV3 898 aaPredicted RBP19.4■□□□□ 0.7
SSR4-206ENST00000460616 SMC5Q8IY18 1101 aa19.4■□□□□ 0.7
SSR4-206ENST00000460616 PHF23Q9BUL5 403 aaPredicted RBP19.4■□□□□ 0.7
SSR4-206ENST00000460616 EID1Q9Y6B2 187 aa19.4■□□□□ 0.7
SSR4-206ENST00000460616 MYOM1P52179 1685 aa19.39■□□□□ 0.7
SSR4-206ENST00000460616 PTMSP20962 102 aa19.39■□□□□ 0.69
SSR4-206ENST00000460616 ZKSCAN2Q63HK3 967 aa19.39■□□□□ 0.69
SSR4-206ENST00000460616 ADAMTS13Q76LX8 1427 aa19.39■□□□□ 0.69
SSR4-206ENST00000460616 DZIP1LQ8IYY4 767 aaKnown RBP19.39■□□□□ 0.69
SSR4-206ENST00000460616 PLEKHG1Q9ULL1 1385 aa19.38■□□□□ 0.69
SSR4-206ENST00000460616 SLC24A1O60721 1099 aa19.38■□□□□ 0.69
SSR4-206ENST00000460616 RBM25P49756 843 aaKnown RBP19.38■□□□□ 0.69
SSR4-206ENST00000460616 HSP90AB1P08238 724 aaKnown RBP19.37■□□□□ 0.69
SSR4-206ENST00000460616 CCDC173Q0VFZ6 552 aa19.37■□□□□ 0.69
SSR4-206ENST00000460616 RAB3GAP1Q15042 981 aa19.37■□□□□ 0.69
SSR4-206ENST00000460616 HDGFP51858 240 aaKnown RBP19.37■□□□□ 0.69
SSR4-206ENST00000460616 HDAC1Q13547 482 aaPredicted RBP19.37■□□□□ 0.69
SSR4-206ENST00000460616 SLC26A8Q96RN1 970 aa19.37■□□□□ 0.69
SSR4-206ENST00000460616 NCKAP5LQ9HCH0 1330 aa19.36■□□□□ 0.69
SSR4-206ENST00000460616 METP08581 1390 aa19.36■□□□□ 0.69
SSR4-206ENST00000460616 PPP1R9BQ96SB3 815 aa19.35■□□□□ 0.69
SSR4-206ENST00000460616 ZSCAN30Q86W11 494 aa19.35■□□□□ 0.69
SSR4-206ENST00000460616 ARHGEF28Q8N1W1 1705 aaKnown RBP19.35■□□□□ 0.69
SSR4-206ENST00000460616 CCDC27Q2M243 656 aa19.34■□□□□ 0.69
SSR4-206ENST00000460616 ANKLE2Q86XL3 938 aa19.34■□□□□ 0.69
SSR4-206ENST00000460616 ANP32BQ92688 251 aaKnown RBP19.34■□□□□ 0.69
SSR4-206ENST00000460616 TNNT2P45379 298 aaPredicted RBP19.34■□□□□ 0.69
SSR4-206ENST00000460616 NASPP49321 788 aaPredicted RBP19.34■□□□□ 0.69
SSR4-206ENST00000460616 MORC1Q86VD1 984 aa19.34■□□□□ 0.69
SSR4-206ENST00000460616 TRAK1Q9UPV9 953 aa19.34■□□□□ 0.69
SSR4-206ENST00000460616 OFD1O75665 1012 aa19.33■□□□□ 0.69
SSR4-206ENST00000460616 STK26Q9P289 416 aa19.33■□□□□ 0.69
SSR4-206ENST00000460616 MED14O60244 1454 aa19.33■□□□□ 0.68
SSR4-206ENST00000460616 MSNP26038 577 aaKnown RBP19.31■□□□□ 0.68
SSR4-206ENST00000460616 YTHDC2Q9H6S0 1430 aaKnown RBP19.31■□□□□ 0.68
SSR4-206ENST00000460616 STRCQ7RTU9 1775 aa19.31■□□□□ 0.68
SSR4-206ENST00000460616 DDX19BQ9UMR2 479 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms