RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 SPATA31A3Q5VYP0 1347 aa15.13■□□□□ 0.01
CCDC12-204ENST00000460035 USP54Q70EL1 1684 aa15.12■□□□□ 0.01
CCDC12-204ENST00000460035 MED1Q15648 1581 aaPredicted RBP15.12■□□□□ 0.01
CCDC12-204ENST00000460035 USP6P35125 1406 aa15.12■□□□□ 0.01
CCDC12-204ENST00000460035 SLC12A5Q9H2X9 1139 aa15.12■□□□□ 0.01
CCDC12-204ENST00000460035 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
CCDC12-204ENST00000460035 PIK3C2AO00443 1686 aa15.11■□□□□ 0.01
CCDC12-204ENST00000460035 ARHGEF10O15013 1369 aa15.11■□□□□ 0.01
CCDC12-204ENST00000460035 KIF20BQ96Q89 1820 aa15.1■□□□□ 0.01
CCDC12-204ENST00000460035 PHRF1Q9P1Y6 1649 aaKnown RBP15.1■□□□□ 0.01
CCDC12-204ENST00000460035 SSH2Q76I76 1423 aa15.1■□□□□ 0.01
CCDC12-204ENST00000460035 NUTM2BA6NNL0 878 aaPredicted RBP15.1■□□□□ 0.01
CCDC12-204ENST00000460035 NUTM2EB1AL46 878 aaPredicted RBP15.1■□□□□ 0.01
CCDC12-204ENST00000460035 NUTM2AQ8IVF1 878 aaPredicted RBP15.1■□□□□ 0.01
CCDC12-204ENST00000460035 ZNF692Q9BU19 519 aaPredicted RBP15.1■□□□□ 0.01
CCDC12-204ENST00000460035 SPATA31A6Q5VVP1 1343 aa15.1■□□□□ 0.01
CCDC12-204ENST00000460035 HDGFL2Q7Z4V5 671 aaPredicted RBP15.09■□□□□ 0.01
CCDC12-204ENST00000460035 TERF2IPQ9NYB0 399 aa15.08■□□□□ 0
CCDC12-204ENST00000460035 A0A1W2PP64 1363 aa15.08■□□□□ 0
CCDC12-204ENST00000460035 LRP6O75581 1613 aa15.07■□□□□ 0
CCDC12-204ENST00000460035 KTN1Q86UP2 1357 aaKnown RBP15.07■□□□□ 0
CCDC12-204ENST00000460035 ANKRD36BQ8N2N9 1353 aa15.07■□□□□ 0
CCDC12-204ENST00000460035 C11orf95C9JLR9 678 aaPredicted RBP15.06■□□□□ 0
CCDC12-204ENST00000460035 NUTM2GQ5VZR2 741 aa15.06■□□□□ 0
CCDC12-204ENST00000460035 EDC4Q6P2E9 1401 aaKnown RBP15.06■□□□□ 0
CCDC12-204ENST00000460035 HAP1P54257 671 aaPredicted RBP15.05■□□□□ -0
CCDC12-204ENST00000460035 ABTB2Q8N961 1025 aa15.05■□□□□ -0
CCDC12-204ENST00000460035 TTC21AQ8NDW8 1320 aa15.05■□□□□ -0
CCDC12-204ENST00000460035 ANKRD26Q9UPS8 1709 aa15.05■□□□□ -0
CCDC12-204ENST00000460035 KIF7Q2M1P5 1343 aa15.04■□□□□ -0
CCDC12-204ENST00000460035 MEX3CQ5U5Q3 659 aaKnown RBP15.04■□□□□ -0
CCDC12-204ENST00000460035 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.04■□□□□ -0
CCDC12-204ENST00000460035 CABLES1Q8TDN4 633 aa15.04■□□□□ -0
CCDC12-204ENST00000460035 TTC21BQ7Z4L5 1316 aa15.03■□□□□ -0
CCDC12-204ENST00000460035 SLIT3O75094 1523 aa15.02■□□□□ -0
CCDC12-204ENST00000460035 CCDC7Q96M83 1385 aa15.02■□□□□ -0
CCDC12-204ENST00000460035 ADAMTS2O95450 1211 aa15.02■□□□□ -0
CCDC12-204ENST00000460035 NWD2Q9ULI1 1742 aa15.02□□□□□ -0.01
CCDC12-204ENST00000460035 PLCH1Q4KWH8 1693 aa15.02□□□□□ -0.01
CCDC12-204ENST00000460035 LTN1O94822 1766 aa15.01□□□□□ -0.01
CCDC12-204ENST00000460035 NLRP6P59044 892 aa15.01□□□□□ -0.01
CCDC12-204ENST00000460035 TNKS1BP1Q9C0C2 1729 aaKnown RBP15□□□□□ -0.01
CCDC12-204ENST00000460035 USP19O94966 1318 aa15□□□□□ -0.01
CCDC12-204ENST00000460035 NLRP13Q86W25 1043 aa15□□□□□ -0.01
CCDC12-204ENST00000460035 COL14A1Q05707 1796 aaKnown RBP15□□□□□ -0.01
CCDC12-204ENST00000460035 USP31Q70CQ4 1352 aa14.99□□□□□ -0.01
CCDC12-204ENST00000460035 WASHC2AQ641Q2 1341 aa14.99□□□□□ -0.01
CCDC12-204ENST00000460035 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
CCDC12-204ENST00000460035 PANK3Q9H999 370 aa14.98□□□□□ -0.01
CCDC12-204ENST00000460035 RGPD5Q99666 1765 aa14.98□□□□□ -0.01
CCDC12-204ENST00000460035 MAP2P11137 1827 aaKnown RBP14.97□□□□□ -0.01
CCDC12-204ENST00000460035 NME9Q86XW9 330 aa14.97□□□□□ -0.01
CCDC12-204ENST00000460035 NGLY1Q96IV0 654 aa14.97□□□□□ -0.01
CCDC12-204ENST00000460035 C8orf37Q96NL8 207 aa14.97□□□□□ -0.01
CCDC12-204ENST00000460035 COL18A1P39060 1754 aa14.97□□□□□ -0.01
CCDC12-204ENST00000460035 OVOS2A0A0J9YW53 1432 aa14.97□□□□□ -0.01
CCDC12-204ENST00000460035 OVOS2Q6IE36 1432 aa14.97□□□□□ -0.01
CCDC12-204ENST00000460035 NSD3Q9BZ95 1437 aa14.97□□□□□ -0.01
CCDC12-204ENST00000460035 NRAPQ86VF7 1730 aa14.97□□□□□ -0.01
CCDC12-204ENST00000460035 NFAT5O94916 1531 aa14.97□□□□□ -0.01
CCDC12-204ENST00000460035 CARD14Q9BXL6 1004 aa14.96□□□□□ -0.01
CCDC12-204ENST00000460035 ZRANB1Q9UGI0 708 aa14.96□□□□□ -0.01
CCDC12-204ENST00000460035 SOX12O15370 315 aa14.95□□□□□ -0.02
CCDC12-204ENST00000460035 LMO7Q8WWI1 1683 aa14.95□□□□□ -0.02
CCDC12-204ENST00000460035 ZBTB7CA1YPR0 619 aa14.94□□□□□ -0.02
CCDC12-204ENST00000460035 ZC3H6P61129 1189 aaKnown RBP14.94□□□□□ -0.02
CCDC12-204ENST00000460035 CPDO75976 1380 aa14.94□□□□□ -0.02
CCDC12-204ENST00000460035 ABCC6O95255 1503 aa14.93□□□□□ -0.02
CCDC12-204ENST00000460035 GCP02774 474 aa14.93□□□□□ -0.02
CCDC12-204ENST00000460035 SLIT2O94813 1529 aa14.92□□□□□ -0.02
CCDC12-204ENST00000460035 FYB1O15117 783 aa14.92□□□□□ -0.02
CCDC12-204ENST00000460035 COG3Q96JB2 828 aa14.92□□□□□ -0.02
CCDC12-204ENST00000460035 GGNBP2Q9H3C7 697 aa14.92□□□□□ -0.02
CCDC12-204ENST00000460035 CGNL1Q0VF96 1302 aa14.92□□□□□ -0.02
CCDC12-204ENST00000460035 FAM83GA6ND36 823 aa14.91□□□□□ -0.02
CCDC12-204ENST00000460035 KCNH5Q8NCM2 988 aa14.91□□□□□ -0.02
CCDC12-204ENST00000460035 KNSTRNQ9Y448 316 aa14.91□□□□□ -0.02
CCDC12-204ENST00000460035 NSD2O96028 1365 aa14.9□□□□□ -0.02
CCDC12-204ENST00000460035 KIAA0232Q92628 1395 aa14.9□□□□□ -0.02
CCDC12-204ENST00000460035 FNBP4Q8N3X1 1017 aaPredicted RBP14.9□□□□□ -0.02
CCDC12-204ENST00000460035 PRDM11Q9NQV5 511 aa14.9□□□□□ -0.02
CCDC12-204ENST00000460035 AFF2P51816 1311 aa14.9□□□□□ -0.02
CCDC12-204ENST00000460035 CHRNA2Q15822 529 aa14.89□□□□□ -0.03
CCDC12-204ENST00000460035 ZNF772Q68DY9 489 aaPredicted RBP14.88□□□□□ -0.03
CCDC12-204ENST00000460035 USP21Q9UK80 565 aa14.88□□□□□ -0.03
CCDC12-204ENST00000460035 BCL9LQ86UU0 1499 aa14.88□□□□□ -0.03
CCDC12-204ENST00000460035 PER1O15534 1290 aaPredicted RBP14.87□□□□□ -0.03
CCDC12-204ENST00000460035 RGS17Q9UGC6 210 aaPredicted RBP14.87□□□□□ -0.03
CCDC12-204ENST00000460035 FAM208AQ9UK61 1670 aaKnown RBP14.87□□□□□ -0.03
CCDC12-204ENST00000460035 CAMTA1Q9Y6Y1 1673 aa14.87□□□□□ -0.03
CCDC12-204ENST00000460035 AATKQ6ZMQ8 1374 aa14.86□□□□□ -0.03
CCDC12-204ENST00000460035 NPC1L1Q9UHC9 1359 aa14.86□□□□□ -0.03
CCDC12-204ENST00000460035 CNGB1Q14028 1251 aaPredicted RBP14.86□□□□□ -0.03
CCDC12-204ENST00000460035 ARHGEF25Q86VW2 580 aa14.86□□□□□ -0.03
CCDC12-204ENST00000460035 BTG4Q9NY30 223 aa14.86□□□□□ -0.03
CCDC12-204ENST00000460035 PEAK1Q9H792 1746 aa14.86□□□□□ -0.03
CCDC12-204ENST00000460035 WNK3Q9BYP7 1800 aa14.85□□□□□ -0.03
CCDC12-204ENST00000460035 FBLN1P23142 703 aa14.85□□□□□ -0.03
CCDC12-204ENST00000460035 EVA1CP58658 441 aa14.85□□□□□ -0.03
CCDC12-204ENST00000460035 AMER1Q5JTC6 1135 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms