RNA–Protein interactions for RNA: ENST00000459910.5

PSMD2-208, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 5

Gene PSMD2, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-208	ENST00000459910	NWD2	Q9ULI1	1742 aa		32.08	■■■□□ 2.73
PSMD2-208	ENST00000459910	BCL9L	Q86UU0	1499 aa		32.08	■■■□□ 2.73
PSMD2-208	ENST00000459910	ACE	P12821	1306 aa		32.07	■■■□□ 2.72
PSMD2-208	ENST00000459910	EVC2	Q86UK5	1308 aa		32.07	■■■□□ 2.72
PSMD2-208	ENST00000459910	SLIT2	O94813	1529 aa		32.07	■■■□□ 2.72
PSMD2-208	ENST00000459910	PLEKHG3	A1L390	1219 aa		32.06	■■■□□ 2.72
PSMD2-208	ENST00000459910	CABP2	Q9NPB3	220 aa		32.06	■■■□□ 2.72
PSMD2-208	ENST00000459910	CARD11	Q9BXL7	1154 aa		32.05	■■■□□ 2.72
PSMD2-208	ENST00000459910	CRYBG1	Q9Y4K1	1723 aa		32.03	■■■□□ 2.72
PSMD2-208	ENST00000459910	UNC5CL	Q8IV45	518 aa		32.03	■■■□□ 2.72
PSMD2-208	ENST00000459910	COL14A1	Q05707	1796 aa	Known RBP	31.99	■■■□□ 2.71
PSMD2-208	ENST00000459910	PHRF1	Q9P1Y6	1649 aa	Known RBP	31.99	■■■□□ 2.71
PSMD2-208	ENST00000459910	GJD4	Q96KN9	370 aa	Predicted RBP	31.96	■■■□□ 2.71
PSMD2-208	ENST00000459910	BRD4	O60885	1362 aa	Predicted RBP	31.95	■■■□□ 2.71
PSMD2-208	ENST00000459910	SBNO2	Q9Y2G9	1366 aa		31.95	■■■□□ 2.71
PSMD2-208	ENST00000459910	CABP1	Q9NZU7	370 aa		31.93	■■■□□ 2.7
PSMD2-208	ENST00000459910	ATAD2	Q6PL18	1390 aa		31.93	■■■□□ 2.7
PSMD2-208	ENST00000459910	NRAP	Q86VF7	1730 aa		31.92	■■■□□ 2.7
PSMD2-208	ENST00000459910	GLI3	P10071	1580 aa		31.91	■■■□□ 2.7
PSMD2-208	ENST00000459910	ABTB2	Q8N961	1025 aa		31.91	■■■□□ 2.7
PSMD2-208	ENST00000459910	FAM83G	A6ND36	823 aa		31.9	■■■□□ 2.7
PSMD2-208	ENST00000459910	PCGF6	Q9BYE7	350 aa		31.9	■■■□□ 2.7
PSMD2-208	ENST00000459910	CCDC9	Q9Y3X0	531 aa	Known RBP	31.9	■■■□□ 2.7
PSMD2-208	ENST00000459910	VPS72	Q15906	364 aa		31.89	■■■□□ 2.7
PSMD2-208	ENST00000459910	NUTM2G	Q5VZR2	741 aa		31.89	■■■□□ 2.7
PSMD2-208	ENST00000459910	PRDM11	Q9NQV5	511 aa		31.89	■■■□□ 2.7
PSMD2-208	ENST00000459910	CLSPN	Q9HAW4	1339 aa		31.89	■■■□□ 2.7
PSMD2-208	ENST00000459910	USP6	P35125	1406 aa		31.89	■■■□□ 2.7
PSMD2-208	ENST00000459910	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.88	■■■□□ 2.69
PSMD2-208	ENST00000459910	AKAP12	Q02952	1782 aa		31.87	■■■□□ 2.69
PSMD2-208	ENST00000459910	BTG4	Q9NY30	223 aa		31.87	■■■□□ 2.69
PSMD2-208	ENST00000459910	NRK	Q7Z2Y5	1582 aa		31.85	■■■□□ 2.69
PSMD2-208	ENST00000459910	KIAA0232	Q92628	1395 aa		31.84	■■■□□ 2.69
PSMD2-208	ENST00000459910	NLRP13	Q86W25	1043 aa		31.84	■■■□□ 2.69
PSMD2-208	ENST00000459910	EP400	Q96L91	3159 aa		31.83	■■■□□ 2.69
PSMD2-208	ENST00000459910	ZNF692	Q9BU19	519 aa	Predicted RBP	31.82	■■■□□ 2.68
PSMD2-208	ENST00000459910	USP19	O94966	1318 aa		31.8	■■■□□ 2.68
PSMD2-208	ENST00000459910	ZC3H6	P61129	1189 aa	Known RBP	31.79	■■■□□ 2.68
PSMD2-208	ENST00000459910	TIMELESS	Q9UNS1	1208 aa		31.78	■■■□□ 2.68
PSMD2-208	ENST00000459910	PIK3C2A	O00443	1686 aa		31.78	■■■□□ 2.68
PSMD2-208	ENST00000459910	SLC24A1	O60721	1099 aa		31.77	■■■□□ 2.68
PSMD2-208	ENST00000459910	MON2	Q7Z3U7	1717 aa		31.77	■■■□□ 2.68
PSMD2-208	ENST00000459910	BRWD3	Q6RI45	1802 aa		31.77	■■■□□ 2.68
PSMD2-208	ENST00000459910	NLRP6	P59044	892 aa		31.75	■■■□□ 2.67
PSMD2-208	ENST00000459910	KTN1	Q86UP2	1357 aa	Known RBP	31.75	■■■□□ 2.67
PSMD2-208	ENST00000459910	SSH2	Q76I76	1423 aa		31.75	■■■□□ 2.67
PSMD2-208	ENST00000459910	CPD	O75976	1380 aa		31.74	■■■□□ 2.67
PSMD2-208	ENST00000459910		A0A0G2JS52	829 aa		31.74	■■■□□ 2.67
PSMD2-208	ENST00000459910	MYT1	Q01538	1121 aa		31.74	■■■□□ 2.67
PSMD2-208	ENST00000459910	CHRNA2	Q15822	529 aa		31.74	■■■□□ 2.67
PSMD2-208	ENST00000459910	CPSF1	Q10570	1443 aa	Known RBP	31.73	■■■□□ 2.67
PSMD2-208	ENST00000459910	TTC21A	Q8NDW8	1320 aa		31.73	■■■□□ 2.67
PSMD2-208	ENST00000459910	SLIT3	O75094	1523 aa		31.72	■■■□□ 2.67
PSMD2-208	ENST00000459910	GC	P02774	474 aa		31.72	■■■□□ 2.67
PSMD2-208	ENST00000459910	SEPT12	Q8IYM1	358 aa		31.72	■■■□□ 2.67
PSMD2-208	ENST00000459910	ST20-MTHFS	A0A0A6YYL1	179 aa		31.71	■■■□□ 2.67
PSMD2-208	ENST00000459910	TMC1	Q8TDI8	760 aa		31.71	■■■□□ 2.67
PSMD2-208	ENST00000459910	TTC21B	Q7Z4L5	1316 aa		31.71	■■■□□ 2.67
PSMD2-208	ENST00000459910	USP47	Q96K76	1375 aa		31.69	■■■□□ 2.66
PSMD2-208	ENST00000459910	PUS7	Q96PZ0	661 aa	Known RBP	31.69	■■■□□ 2.66
PSMD2-208	ENST00000459910	LMO7	Q8WWI1	1683 aa		31.69	■■■□□ 2.66
PSMD2-208	ENST00000459910	SPATA31A5	Q5VU36	1347 aa		31.69	■■■□□ 2.66
PSMD2-208	ENST00000459910	SPATA31A7	Q8IWB4	1347 aa		31.69	■■■□□ 2.66
PSMD2-208	ENST00000459910	ONECUT3	O60422	494 aa	Predicted RBP	31.68	■■■□□ 2.66
PSMD2-208	ENST00000459910	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	31.68	■■■□□ 2.66
PSMD2-208	ENST00000459910	CCER1	Q8TC90	406 aa	Predicted RBP	31.68	■■■□□ 2.66
PSMD2-208	ENST00000459910	STRN4	Q9NRL3	753 aa		31.68	■■■□□ 2.66
PSMD2-208	ENST00000459910	FAM98C	Q17RN3	349 aa	Known RBP	31.67	■■■□□ 2.66
PSMD2-208	ENST00000459910	EVA1C	P58658	441 aa		31.66	■■■□□ 2.66
PSMD2-208	ENST00000459910	TESK2	Q96S53	571 aa		31.65	■■■□□ 2.66
PSMD2-208	ENST00000459910	NINL	Q9Y2I6	1382 aa		31.65	■■■□□ 2.66
PSMD2-208	ENST00000459910	ZBTB7C	A1YPR0	619 aa		31.64	■■■□□ 2.66
PSMD2-208	ENST00000459910	TERF2IP	Q9NYB0	399 aa		31.64	■■■□□ 2.66
PSMD2-208	ENST00000459910	CAMTA1	Q9Y6Y1	1673 aa		31.63	■■■□□ 2.65
PSMD2-208	ENST00000459910	KRT27	Q7Z3Y8	459 aa		31.62	■■■□□ 2.65
PSMD2-208	ENST00000459910	CCDC125	Q86Z20	511 aa		31.62	■■■□□ 2.65
PSMD2-208	ENST00000459910	KCNH5	Q8NCM2	988 aa		31.62	■■■□□ 2.65
PSMD2-208	ENST00000459910	CD163L1	Q9NR16	1453 aa		31.62	■■■□□ 2.65
PSMD2-208	ENST00000459910	THSD7A	Q9UPZ6	1657 aa		31.61	■■■□□ 2.65
PSMD2-208	ENST00000459910	SPATA31A1	Q5TZJ5	1347 aa		31.6	■■■□□ 2.65
PSMD2-208	ENST00000459910	EDC4	Q6P2E9	1401 aa	Known RBP	31.59	■■■□□ 2.65
PSMD2-208	ENST00000459910	TMF1	P82094	1093 aa		31.59	■■■□□ 2.65
PSMD2-208	ENST00000459910	SLC12A5	Q9H2X9	1139 aa		31.59	■■■□□ 2.65
PSMD2-208	ENST00000459910	USP54	Q70EL1	1684 aa		31.59	■■■□□ 2.65
PSMD2-208	ENST00000459910	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	31.58	■■■□□ 2.65
PSMD2-208	ENST00000459910	COL5A2	P05997	1499 aa	Predicted RBP	31.58	■■■□□ 2.65
PSMD2-208	ENST00000459910		A0A1W2PP64	1363 aa		31.57	■■■□□ 2.64
PSMD2-208	ENST00000459910	AATK	Q6ZMQ8	1374 aa		31.57	■■■□□ 2.64
PSMD2-208	ENST00000459910	USP35	Q9P2H5	1018 aa		31.55	■■■□□ 2.64
PSMD2-208	ENST00000459910	BLM	P54132	1417 aa	Predicted RBP	31.55	■■■□□ 2.64
PSMD2-208	ENST00000459910	SOX12	O15370	315 aa		31.54	■■■□□ 2.64
PSMD2-208	ENST00000459910	SF3B2	Q13435	895 aa	Known RBP	31.53	■■■□□ 2.64
PSMD2-208	ENST00000459910	CDCA8	Q53HL2	280 aa		31.53	■■■□□ 2.64
PSMD2-208	ENST00000459910	LARP1	Q6PKG0	1096 aa	Known RBP	31.53	■■■□□ 2.64
PSMD2-208	ENST00000459910	NFAT5	O94916	1531 aa		31.53	■■■□□ 2.64
PSMD2-208	ENST00000459910	USP31	Q70CQ4	1352 aa		31.53	■■■□□ 2.64
PSMD2-208	ENST00000459910	COL18A1	P39060	1754 aa		31.52	■■■□□ 2.64
PSMD2-208	ENST00000459910	CRB1	P82279	1406 aa		31.5	■■■□□ 2.63
PSMD2-208	ENST00000459910	ABCC6	O95255	1503 aa		31.5	■■■□□ 2.63
PSMD2-208	ENST00000459910	NME9	Q86XW9	330 aa		31.49	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms