RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ARHGEF10O15013 1369 aa17.96■□□□□ 0.47
COL18A1-206ENST00000459895 LRRC59Q96AG4 307 aaKnown RBP17.95■□□□□ 0.46
COL18A1-206ENST00000459895 SLIT3O75094 1523 aa17.94■□□□□ 0.46
COL18A1-206ENST00000459895 PSME1Q06323 249 aa17.94■□□□□ 0.46
COL18A1-206ENST00000459895 PUS7Q96PZ0 661 aaKnown RBP17.94■□□□□ 0.46
COL18A1-206ENST00000459895 SPATA31A6Q5VVP1 1343 aa17.94■□□□□ 0.46
COL18A1-206ENST00000459895 KTN1Q86UP2 1357 aaKnown RBP17.93■□□□□ 0.46
COL18A1-206ENST00000459895 ANKRD36BQ8N2N9 1353 aa17.93■□□□□ 0.46
COL18A1-206ENST00000459895 ANKRD26Q9UPS8 1709 aa17.93■□□□□ 0.46
COL18A1-206ENST00000459895 EDC4Q6P2E9 1401 aaKnown RBP17.93■□□□□ 0.46
COL18A1-206ENST00000459895 SLC24A1O60721 1099 aa17.93■□□□□ 0.46
COL18A1-206ENST00000459895 TMC1Q8TDI8 760 aa17.92■□□□□ 0.46
COL18A1-206ENST00000459895 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
COL18A1-206ENST00000459895 NRAPQ86VF7 1730 aa17.91■□□□□ 0.46
COL18A1-206ENST00000459895 BRD4O60885 1362 aaPredicted RBP17.91■□□□□ 0.46
COL18A1-206ENST00000459895 CDCA8Q53HL2 280 aa17.9■□□□□ 0.46
COL18A1-206ENST00000459895 KIF7Q2M1P5 1343 aa17.9■□□□□ 0.46
COL18A1-206ENST00000459895 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.89■□□□□ 0.46
COL18A1-206ENST00000459895 C11orf95C9JLR9 678 aaPredicted RBP17.89■□□□□ 0.45
COL18A1-206ENST00000459895 PAK3O75914 559 aaPredicted RBP17.89■□□□□ 0.45
COL18A1-206ENST00000459895 NFAT5O94916 1531 aa17.88■□□□□ 0.45
COL18A1-206ENST00000459895 ZEB1P37275 1124 aaPredicted RBP17.88■□□□□ 0.45
COL18A1-206ENST00000459895 LTN1O94822 1766 aa17.88■□□□□ 0.45
COL18A1-206ENST00000459895 COL14A1Q05707 1796 aaKnown RBP17.88■□□□□ 0.45
COL18A1-206ENST00000459895 NWD2Q9ULI1 1742 aa17.87■□□□□ 0.45
COL18A1-206ENST00000459895 LMOD2Q6P5Q4 547 aa17.87■□□□□ 0.45
COL18A1-206ENST00000459895 POLR3GLQ9BT43 218 aa17.87■□□□□ 0.45
COL18A1-206ENST00000459895 CCDC7Q96M83 1385 aa17.87■□□□□ 0.45
COL18A1-206ENST00000459895 OVOS2A0A0J9YW53 1432 aa17.87■□□□□ 0.45
COL18A1-206ENST00000459895 OVOS2Q6IE36 1432 aa17.87■□□□□ 0.45
COL18A1-206ENST00000459895 NSD3Q9BZ95 1437 aa17.87■□□□□ 0.45
COL18A1-206ENST00000459895 LMO7Q8WWI1 1683 aa17.87■□□□□ 0.45
COL18A1-206ENST00000459895 NUTM2BA6NNL0 878 aaPredicted RBP17.86■□□□□ 0.45
COL18A1-206ENST00000459895 NUTM2EB1AL46 878 aaPredicted RBP17.86■□□□□ 0.45
COL18A1-206ENST00000459895 HDGFL2Q7Z4V5 671 aaPredicted RBP17.86■□□□□ 0.45
COL18A1-206ENST00000459895 NUTM2AQ8IVF1 878 aaPredicted RBP17.86■□□□□ 0.45
COL18A1-206ENST00000459895 USP19O94966 1318 aa17.86■□□□□ 0.45
COL18A1-206ENST00000459895 TTC21BQ7Z4L5 1316 aa17.86■□□□□ 0.45
COL18A1-206ENST00000459895 PLEKHG5O94827 1062 aa17.85■□□□□ 0.45
COL18A1-206ENST00000459895 TERF2IPQ9NYB0 399 aa17.85■□□□□ 0.45
COL18A1-206ENST00000459895 TTC21AQ8NDW8 1320 aa17.84■□□□□ 0.45
COL18A1-206ENST00000459895 NUTM2GQ5VZR2 741 aa17.84■□□□□ 0.45
COL18A1-206ENST00000459895 CABLES1Q8TDN4 633 aa17.84■□□□□ 0.45
COL18A1-206ENST00000459895 WASHC2AQ641Q2 1341 aa17.83■□□□□ 0.44
COL18A1-206ENST00000459895 ZNF692Q9BU19 519 aaPredicted RBP17.82■□□□□ 0.44
COL18A1-206ENST00000459895 NME9Q86XW9 330 aa17.81■□□□□ 0.44
COL18A1-206ENST00000459895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.81■□□□□ 0.44
COL18A1-206ENST00000459895 ABTB2Q8N961 1025 aa17.81■□□□□ 0.44
COL18A1-206ENST00000459895 USP31Q70CQ4 1352 aa17.8■□□□□ 0.44
COL18A1-206ENST00000459895 ADAMTS2O95450 1211 aa17.8■□□□□ 0.44
COL18A1-206ENST00000459895 MEX3CQ5U5Q3 659 aaKnown RBP17.8■□□□□ 0.44
COL18A1-206ENST00000459895 COL18A1P39060 1754 aa17.8■□□□□ 0.44
COL18A1-206ENST00000459895 SLIT2O94813 1529 aa17.79■□□□□ 0.44
COL18A1-206ENST00000459895 RGPD5Q99666 1765 aa17.79■□□□□ 0.44
COL18A1-206ENST00000459895 ABCC6O95255 1503 aa17.78■□□□□ 0.44
COL18A1-206ENST00000459895 HAP1P54257 671 aaPredicted RBP17.78■□□□□ 0.44
COL18A1-206ENST00000459895 ZRANB1Q9UGI0 708 aa17.78■□□□□ 0.44
COL18A1-206ENST00000459895 C8orf37Q96NL8 207 aa17.77■□□□□ 0.44
COL18A1-206ENST00000459895 CARD14Q9BXL6 1004 aa17.77■□□□□ 0.44
COL18A1-206ENST00000459895 KIAA0232Q92628 1395 aa17.77■□□□□ 0.43
COL18A1-206ENST00000459895 PEAK1Q9H792 1746 aa17.76■□□□□ 0.43
COL18A1-206ENST00000459895 WNK3Q9BYP7 1800 aa17.76■□□□□ 0.43
COL18A1-206ENST00000459895 NLRP6P59044 892 aa17.75■□□□□ 0.43
COL18A1-206ENST00000459895 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
COL18A1-206ENST00000459895 CPDO75976 1380 aa17.75■□□□□ 0.43
COL18A1-206ENST00000459895 AFF2P51816 1311 aa17.74■□□□□ 0.43
COL18A1-206ENST00000459895 NLRP13Q86W25 1043 aa17.74■□□□□ 0.43
COL18A1-206ENST00000459895 BCL9LQ86UU0 1499 aa17.74■□□□□ 0.43
COL18A1-206ENST00000459895 GLI3P10071 1580 aa17.73■□□□□ 0.43
COL18A1-206ENST00000459895 CAMTA1Q9Y6Y1 1673 aa17.72■□□□□ 0.43
COL18A1-206ENST00000459895 PANK3Q9H999 370 aa17.72■□□□□ 0.43
COL18A1-206ENST00000459895 FAM208AQ9UK61 1670 aaKnown RBP17.71■□□□□ 0.43
COL18A1-206ENST00000459895 SOX12O15370 315 aa17.71■□□□□ 0.43
COL18A1-206ENST00000459895 RGS17Q9UGC6 210 aaPredicted RBP17.71■□□□□ 0.43
COL18A1-206ENST00000459895 ATRNO75882 1429 aa17.71■□□□□ 0.43
COL18A1-206ENST00000459895 COL5A2P05997 1499 aaPredicted RBP17.7■□□□□ 0.42
COL18A1-206ENST00000459895 GCP02774 474 aa17.7■□□□□ 0.42
COL18A1-206ENST00000459895 GGNBP2Q9H3C7 697 aa17.7■□□□□ 0.42
COL18A1-206ENST00000459895 PRDM11Q9NQV5 511 aa17.7■□□□□ 0.42
COL18A1-206ENST00000459895 CGNL1Q0VF96 1302 aa17.7■□□□□ 0.42
COL18A1-206ENST00000459895 NSD2O96028 1365 aa17.69■□□□□ 0.42
COL18A1-206ENST00000459895 ZC3H6P61129 1189 aaKnown RBP17.69■□□□□ 0.42
COL18A1-206ENST00000459895 FYB1O15117 783 aa17.68■□□□□ 0.42
COL18A1-206ENST00000459895 CHRNA2Q15822 529 aa17.68■□□□□ 0.42
COL18A1-206ENST00000459895 NGLY1Q96IV0 654 aa17.68■□□□□ 0.42
COL18A1-206ENST00000459895 FNBP4Q8N3X1 1017 aaPredicted RBP17.67■□□□□ 0.42
COL18A1-206ENST00000459895 COG3Q96JB2 828 aa17.67■□□□□ 0.42
COL18A1-206ENST00000459895 MAP2P11137 1827 aaKnown RBP17.66■□□□□ 0.42
COL18A1-206ENST00000459895 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
COL18A1-206ENST00000459895 FAM83GA6ND36 823 aa17.66■□□□□ 0.42
COL18A1-206ENST00000459895 THSD7AQ9UPZ6 1657 aa17.66■□□□□ 0.42
COL18A1-206ENST00000459895 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
COL18A1-206ENST00000459895 KCNH5Q8NCM2 988 aa17.65■□□□□ 0.42
COL18A1-206ENST00000459895 USP21Q9UK80 565 aa17.65■□□□□ 0.42
COL18A1-206ENST00000459895 RGPD2P0DJD1 1756 aa17.65■□□□□ 0.42
COL18A1-206ENST00000459895 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.42
COL18A1-206ENST00000459895 POTEAQ6S8J7 498 aa17.64■□□□□ 0.41
COL18A1-206ENST00000459895 RTL1A6NKG5 1358 aa17.64■□□□□ 0.41
COL18A1-206ENST00000459895 RGS12O14924 1447 aa17.64■□□□□ 0.41
COL18A1-206ENST00000459895 ZNF772Q68DY9 489 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms