RNA–Protein interactions for RNA: ENST00000459711.5

CHRD-207, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 503 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-207ENST00000459711 CRYBG1Q9Y4K1 1723 aa29.59■■■□□ 2.33
CHRD-207ENST00000459711 FAM182BQ5T319 152 aa29.58■■■□□ 2.33
CHRD-207ENST00000459711 TNS1Q9HBL0 1735 aaKnown RBP29.58■■■□□ 2.33
CHRD-207ENST00000459711 ACIN1Q9UKV3 1341 aaKnown RBP29.58■■■□□ 2.33
CHRD-207ENST00000459711 ADGRB1O14514 1584 aa29.57■■■□□ 2.32
CHRD-207ENST00000459711 EIF3AQ14152 1382 aaKnown RBP29.56■■■□□ 2.32
CHRD-207ENST00000459711 PRR36Q9H6K5 1346 aa29.56■■■□□ 2.32
CHRD-207ENST00000459711 TULP4Q9NRJ4 1543 aa29.55■■■□□ 2.32
CHRD-207ENST00000459711 R3HDM1Q15032 1099 aaKnown RBP29.55■■■□□ 2.32
CHRD-207ENST00000459711 HIRIP3Q9BW71 556 aaPredicted RBP29.54■■■□□ 2.32
CHRD-207ENST00000459711 PRDM11Q9NQV5 511 aa29.5■■■□□ 2.31
CHRD-207ENST00000459711 TRAK1Q9UPV9 953 aa29.5■■■□□ 2.31
CHRD-207ENST00000459711 MINK1Q8N4C8 1332 aaPredicted RBP29.49■■■□□ 2.31
CHRD-207ENST00000459711 EZH2Q15910 746 aaKnown RBP29.48■■■□□ 2.31
CHRD-207ENST00000459711 WASLO00401 505 aaPredicted RBP29.47■■■□□ 2.31
CHRD-207ENST00000459711 SPATA31A1Q5TZJ5 1347 aa29.46■■■□□ 2.31
CHRD-207ENST00000459711 NGDNQ8NEJ9 315 aaKnown RBP29.46■■■□□ 2.31
CHRD-207ENST00000459711 PAK3O75914 559 aaPredicted RBP29.45■■■□□ 2.31
CHRD-207ENST00000459711 CAMKK2Q96RR4 588 aa29.45■■■□□ 2.31
CHRD-207ENST00000459711 KIAA0232Q92628 1395 aa29.43■■■□□ 2.3
CHRD-207ENST00000459711 FAM196AQ6ZSG2 479 aa29.43■■■□□ 2.3
CHRD-207ENST00000459711 TRIM37O94972 964 aa29.42■■■□□ 2.3
CHRD-207ENST00000459711 PHRF1Q9P1Y6 1649 aaKnown RBP29.42■■■□□ 2.3
CHRD-207ENST00000459711 PARD3Q8TEW0 1356 aa29.41■■■□□ 2.3
CHRD-207ENST00000459711 ITSN1Q15811 1721 aa29.41■■■□□ 2.3
CHRD-207ENST00000459711 ATP7BP35670 1465 aa29.4■■■□□ 2.3
CHRD-207ENST00000459711 CHRNA2Q15822 529 aa29.38■■■□□ 2.29
CHRD-207ENST00000459711 STRN4Q9NRL3 753 aa29.38■■■□□ 2.29
CHRD-207ENST00000459711 RREB1Q92766 1687 aa29.37■■■□□ 2.29
CHRD-207ENST00000459711 APBA3O96018 575 aa29.36■■■□□ 2.29
CHRD-207ENST00000459711 ARHGEF28Q8N1W1 1705 aaKnown RBP29.34■■■□□ 2.29
CHRD-207ENST00000459711 NUDT16Q96DE0 195 aaKnown RBP29.33■■■□□ 2.29
CHRD-207ENST00000459711 NUP188Q5SRE5 1749 aa29.33■■■□□ 2.29
CHRD-207ENST00000459711 SSH2Q76I76 1423 aa29.32■■■□□ 2.28
CHRD-207ENST00000459711 ZC3H6P61129 1189 aaKnown RBP29.32■■■□□ 2.28
CHRD-207ENST00000459711 BARGINQ6ZT62 677 aa29.32■■■□□ 2.28
CHRD-207ENST00000459711 KDM2AQ9Y2K7 1162 aa29.32■■■□□ 2.28
CHRD-207ENST00000459711 DCAF11Q8TEB1 546 aa29.3■■■□□ 2.28
CHRD-207ENST00000459711 USP35Q9P2H5 1018 aa29.3■■■□□ 2.28
CHRD-207ENST00000459711 PDE3BQ13370 1112 aa29.29■■■□□ 2.28
CHRD-207ENST00000459711 POLR3AO14802 1390 aaPredicted RBP29.28■■■□□ 2.28
CHRD-207ENST00000459711 NRKQ7Z2Y5 1582 aa29.28■■■□□ 2.28
CHRD-207ENST00000459711 NUTM2GQ5VZR2 741 aa29.28■■■□□ 2.28
CHRD-207ENST00000459711 STAC3Q96MF2 364 aa29.28■■■□□ 2.28
CHRD-207ENST00000459711 TOPAZ1Q8N9V7 1692 aa29.27■■■□□ 2.28
CHRD-207ENST00000459711 CAMTA1Q9Y6Y1 1673 aa29.27■■■□□ 2.28
CHRD-207ENST00000459711 EVA1CP58658 441 aa29.26■■■□□ 2.27
CHRD-207ENST00000459711 RAB3GAP2Q9H2M9 1393 aa29.26■■■□□ 2.27
CHRD-207ENST00000459711 LMO7Q8WWI1 1683 aa29.25■■■□□ 2.27
CHRD-207ENST00000459711 NBPF8Q3BBV2 869 aa29.24■■■□□ 2.27
CHRD-207ENST00000459711 NBPF14Q5TI25 921 aa29.24■■■□□ 2.27
CHRD-207ENST00000459711 CPDO75976 1380 aa29.24■■■□□ 2.27
CHRD-207ENST00000459711 ACEP12821 1306 aa29.23■■■□□ 2.27
CHRD-207ENST00000459711 LARP1Q6PKG0 1096 aaKnown RBP29.23■■■□□ 2.27
CHRD-207ENST00000459711 TCP11L2Q8N4U5 519 aa29.23■■■□□ 2.27
CHRD-207ENST00000459711 CDK19Q9BWU1 502 aa29.23■■■□□ 2.27
CHRD-207ENST00000459711 YY1P25490 414 aa29.22■■■□□ 2.27
CHRD-207ENST00000459711 USP19O94966 1318 aa29.2■■■□□ 2.27
CHRD-207ENST00000459711 CCDC61Q9Y6R9 512 aa29.2■■■□□ 2.26
CHRD-207ENST00000459711 PARP4Q9UKK3 1724 aaKnown RBP29.2■■■□□ 2.26
CHRD-207ENST00000459711 THRAP3Q9Y2W1 955 aaKnown RBP29.19■■■□□ 2.26
CHRD-207ENST00000459711 PLEKHG3A1L390 1219 aa29.18■■■□□ 2.26
CHRD-207ENST00000459711 ABTB2Q8N961 1025 aa29.18■■■□□ 2.26
CHRD-207ENST00000459711 SPON1Q9HCB6 807 aa29.16■■■□□ 2.26
CHRD-207ENST00000459711 C11orf95C9JLR9 678 aaPredicted RBP29.14■■■□□ 2.26
CHRD-207ENST00000459711 COL5A2P05997 1499 aaPredicted RBP29.14■■■□□ 2.26
CHRD-207ENST00000459711 NINLQ9Y2I6 1382 aa29.13■■■□□ 2.25
CHRD-207ENST00000459711 KCNQ2O43526 872 aa29.13■■■□□ 2.25
CHRD-207ENST00000459711 PPP1R1BQ9UD71 204 aaPredicted RBP29.13■■■□□ 2.25
CHRD-207ENST00000459711 RGPD3A6NKT7 1758 aaPredicted RBP29.12■■■□□ 2.25
CHRD-207ENST00000459711 RGPD4Q7Z3J3 1758 aa29.12■■■□□ 2.25
CHRD-207ENST00000459711 PEAK1Q9H792 1746 aa29.11■■■□□ 2.25
CHRD-207ENST00000459711 GCP02774 474 aa29.11■■■□□ 2.25
CHRD-207ENST00000459711 NLRP13Q86W25 1043 aa29.11■■■□□ 2.25
CHRD-207ENST00000459711 OVOS2A0A0G2JMS6 1433 aa29.11■■■□□ 2.25
CHRD-207ENST00000459711 OVOS2A0A0J9YW53 1432 aa29.11■■■□□ 2.25
CHRD-207ENST00000459711 OVOS2Q6IE36 1432 aa29.11■■■□□ 2.25
CHRD-207ENST00000459711 CRB1P82279 1406 aa29.1■■■□□ 2.25
CHRD-207ENST00000459711 KIAA1210Q9ULL0 1709 aa29.08■■■□□ 2.25
CHRD-207ENST00000459711 SBF2Q86WG5 1849 aa29.07■■■□□ 2.24
CHRD-207ENST00000459711 LRRC37A3O60309 1634 aa29.05■■■□□ 2.24
CHRD-207ENST00000459711 PPIP5K1Q6PFW1 1433 aa29.05■■■□□ 2.24
CHRD-207ENST00000459711 DCAF8L1A6NGE4 600 aa29.05■■■□□ 2.24
CHRD-207ENST00000459711 PLSCR1O15162 318 aa29.05■■■□□ 2.24
CHRD-207ENST00000459711 BRD4O60885 1362 aaPredicted RBP29.04■■■□□ 2.24
CHRD-207ENST00000459711 CASZ1Q86V15 1759 aa29.03■■■□□ 2.24
CHRD-207ENST00000459711 AATKQ6ZMQ8 1374 aa29.01■■■□□ 2.24
CHRD-207ENST00000459711 ANO8Q9HCE9 1232 aaPredicted RBP29.01■■■□□ 2.23
CHRD-207ENST00000459711 SLIT3O75094 1523 aa29■■■□□ 2.23
CHRD-207ENST00000459711 SRPK2P78362 688 aaKnown RBP29■■■□□ 2.23
CHRD-207ENST00000459711 DDB1Q16531 1140 aa28.99■■■□□ 2.23
CHRD-207ENST00000459711 WNK3Q9BYP7 1800 aa28.97■■■□□ 2.23
CHRD-207ENST00000459711 ZBTB7CA1YPR0 619 aa28.97■■■□□ 2.23
CHRD-207ENST00000459711 BCL11BQ9C0K0 894 aaPredicted RBP28.97■■■□□ 2.23
CHRD-207ENST00000459711 USP6P35125 1406 aa28.96■■■□□ 2.23
CHRD-207ENST00000459711 COL18A1P39060 1754 aa28.96■■■□□ 2.23
CHRD-207ENST00000459711 NBPF1Q3BBV0 1214 aa28.96■■■□□ 2.23
CHRD-207ENST00000459711 CABP2Q9NPB3 220 aa28.96■■■□□ 2.23
CHRD-207ENST00000459711 NLRP6P59044 892 aa28.95■■■□□ 2.22
CHRD-207ENST00000459711 TOM1L2Q6ZVM7 507 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms