RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 SOCS7O14512 581 aa29.3■■■□□ 2.28
VARS-218ENST00000459667 ST20-MTHFSA0A0A6YYL1 179 aa29.28■■■□□ 2.28
VARS-218ENST00000459667 FNBP4Q8N3X1 1017 aaPredicted RBP29.27■■■□□ 2.28
VARS-218ENST00000459667 USP47Q96K76 1375 aa29.26■■■□□ 2.28
VARS-218ENST00000459667 CRYBG1Q9Y4K1 1723 aa29.26■■■□□ 2.27
VARS-218ENST00000459667 USP21Q9UK80 565 aa29.26■■■□□ 2.27
VARS-218ENST00000459667 USP6P35125 1406 aa29.23■■■□□ 2.27
VARS-218ENST00000459667 TESK2Q96S53 571 aa29.23■■■□□ 2.27
VARS-218ENST00000459667 BRD4O60885 1362 aaPredicted RBP29.23■■■□□ 2.27
VARS-218ENST00000459667 QTRT2Q9H974 415 aaKnown RBP29.22■■■□□ 2.27
VARS-218ENST00000459667 RXRBP28702 533 aa29.21■■■□□ 2.27
VARS-218ENST00000459667 AKAP12Q02952 1782 aa29.21■■■□□ 2.27
VARS-218ENST00000459667 BCL9LQ86UU0 1499 aa29.2■■■□□ 2.26
VARS-218ENST00000459667 PHRF1Q9P1Y6 1649 aaKnown RBP29.2■■■□□ 2.26
VARS-218ENST00000459667 SLIT2O94813 1529 aa29.2■■■□□ 2.26
VARS-218ENST00000459667 PLCH1Q4KWH8 1693 aa29.19■■■□□ 2.26
VARS-218ENST00000459667 NUTM2GQ5VZR2 741 aa29.19■■■□□ 2.26
VARS-218ENST00000459667 ABTB2Q8N961 1025 aa29.19■■■□□ 2.26
VARS-218ENST00000459667 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.19■■■□□ 2.26
VARS-218ENST00000459667 SLC24A1O60721 1099 aa29.18■■■□□ 2.26
VARS-218ENST00000459667 TRPC5Q9UL62 973 aaPredicted RBP29.18■■■□□ 2.26
VARS-218ENST00000459667 ATRNO75882 1429 aa29.17■■■□□ 2.26
VARS-218ENST00000459667 RBM6P78332 1123 aaKnown RBP29.16■■■□□ 2.26
VARS-218ENST00000459667 PUS7Q96PZ0 661 aaKnown RBP29.16■■■□□ 2.26
VARS-218ENST00000459667 ZNF692Q9BU19 519 aaPredicted RBP29.16■■■□□ 2.26
VARS-218ENST00000459667 CPSF1Q10570 1443 aaKnown RBP29.15■■■□□ 2.26
VARS-218ENST00000459667 SSH2Q76I76 1423 aa29.15■■■□□ 2.26
VARS-218ENST00000459667 CDK12Q9NYV4 1490 aaPredicted RBP29.15■■■□□ 2.26
VARS-218ENST00000459667 NWD2Q9ULI1 1742 aa29.14■■■□□ 2.26
VARS-218ENST00000459667 TMC1Q8TDI8 760 aa29.14■■■□□ 2.26
VARS-218ENST00000459667 MON2Q7Z3U7 1717 aa29.13■■■□□ 2.25
VARS-218ENST00000459667 COL14A1Q05707 1796 aaKnown RBP29.13■■■□□ 2.25
VARS-218ENST00000459667 NRKQ7Z2Y5 1582 aa29.13■■■□□ 2.25
VARS-218ENST00000459667 FAM83GA6ND36 823 aa29.12■■■□□ 2.25
VARS-218ENST00000459667 UNC5CLQ8IV45 518 aa29.12■■■□□ 2.25
VARS-218ENST00000459667 KTN1Q86UP2 1357 aaKnown RBP29.12■■■□□ 2.25
VARS-218ENST00000459667 NLRP13Q86W25 1043 aa29.11■■■□□ 2.25
VARS-218ENST00000459667 USP19O94966 1318 aa29.11■■■□□ 2.25
VARS-218ENST00000459667 PIK3C2AO00443 1686 aa29.11■■■□□ 2.25
VARS-218ENST00000459667 CD163L1Q9NR16 1453 aa29.1■■■□□ 2.25
VARS-218ENST00000459667 TMF1P82094 1093 aa29.1■■■□□ 2.25
VARS-218ENST00000459667 SLC12A5Q9H2X9 1139 aa29.09■■■□□ 2.25
VARS-218ENST00000459667 TTC21BQ7Z4L5 1316 aa29.09■■■□□ 2.25
VARS-218ENST00000459667 PRDM11Q9NQV5 511 aa29.08■■■□□ 2.25
VARS-218ENST00000459667 RGS12O14924 1447 aa29.08■■■□□ 2.25
VARS-218ENST00000459667 NLRP6P59044 892 aa29.07■■■□□ 2.24
VARS-218ENST00000459667 KIAA0232Q92628 1395 aa29.07■■■□□ 2.24
VARS-218ENST00000459667 NINLQ9Y2I6 1382 aa29.07■■■□□ 2.24
VARS-218ENST00000459667 NRAPQ86VF7 1730 aa29.06■■■□□ 2.24
VARS-218ENST00000459667 TTC21AQ8NDW8 1320 aa29.06■■■□□ 2.24
VARS-218ENST00000459667 HDGFL2Q7Z4V5 671 aaPredicted RBP29.06■■■□□ 2.24
VARS-218ENST00000459667 ZC3H6P61129 1189 aaKnown RBP29.05■■■□□ 2.24
VARS-218ENST00000459667 GJD4Q96KN9 370 aaPredicted RBP29.04■■■□□ 2.24
VARS-218ENST00000459667 BTG4Q9NY30 223 aa29.04■■■□□ 2.24
VARS-218ENST00000459667 TERF2IPQ9NYB0 399 aa29.04■■■□□ 2.24
VARS-218ENST00000459667 A0A1W2PP64 1363 aa29.03■■■□□ 2.24
VARS-218ENST00000459667 SLIT3O75094 1523 aa29.03■■■□□ 2.24
VARS-218ENST00000459667 GLI3P10071 1580 aa29.02■■■□□ 2.24
VARS-218ENST00000459667 VPS72Q15906 364 aa29.02■■■□□ 2.24
VARS-218ENST00000459667 GCP02774 474 aa29.01■■■□□ 2.23
VARS-218ENST00000459667 CHRNA2Q15822 529 aa29.01■■■□□ 2.23
VARS-218ENST00000459667 CDCA8Q53HL2 280 aa29.01■■■□□ 2.23
VARS-218ENST00000459667 CPDO75976 1380 aa29.01■■■□□ 2.23
VARS-218ENST00000459667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29■■■□□ 2.23
VARS-218ENST00000459667 EDC4Q6P2E9 1401 aaKnown RBP29■■■□□ 2.23
VARS-218ENST00000459667 CCDC9Q9Y3X0 531 aaKnown RBP28.99■■■□□ 2.23
VARS-218ENST00000459667 EIF4G2P78344 907 aaKnown RBP eCLIP28.98■■■□□ 2.23
VARS-218ENST00000459667 HSPA5P11021 654 aaKnown RBP28.95■■■□□ 2.22
VARS-218ENST00000459667 LMO7Q8WWI1 1683 aa28.95■■■□□ 2.22
VARS-218ENST00000459667 USP54Q70EL1 1684 aa28.94■■■□□ 2.22
VARS-218ENST00000459667 ANKRD36BQ8N2N9 1353 aa28.94■■■□□ 2.22
VARS-218ENST00000459667 USP31Q70CQ4 1352 aa28.93■■■□□ 2.22
VARS-218ENST00000459667 NME9Q86XW9 330 aa28.93■■■□□ 2.22
VARS-218ENST00000459667 KCNH5Q8NCM2 988 aa28.92■■■□□ 2.22
VARS-218ENST00000459667 MYOM1P52179 1685 aa28.92■■■□□ 2.22
VARS-218ENST00000459667 CAMTA1Q9Y6Y1 1673 aa28.91■■■□□ 2.22
VARS-218ENST00000459667 ZBTB7CA1YPR0 619 aa28.91■■■□□ 2.22
VARS-218ENST00000459667 ZRANB1Q9UGI0 708 aa28.91■■■□□ 2.22
VARS-218ENST00000459667 STRN4Q9NRL3 753 aa28.9■■■□□ 2.22
VARS-218ENST00000459667 SOX12O15370 315 aa28.89■■■□□ 2.22
VARS-218ENST00000459667 NFAT5O94916 1531 aa28.89■■■□□ 2.21
VARS-218ENST00000459667 SPATA31A5Q5VU36 1347 aa28.88■■■□□ 2.21
VARS-218ENST00000459667 SPATA31A7Q8IWB4 1347 aa28.88■■■□□ 2.21
VARS-218ENST00000459667 AATKQ6ZMQ8 1374 aa28.87■■■□□ 2.21
VARS-218ENST00000459667 EVA1CP58658 441 aa28.85■■■□□ 2.21
VARS-218ENST00000459667 OVOS2A0A0J9YW53 1432 aa28.85■■■□□ 2.21
VARS-218ENST00000459667 OVOS2Q6IE36 1432 aa28.85■■■□□ 2.21
VARS-218ENST00000459667 COL18A1P39060 1754 aa28.84■■■□□ 2.21
VARS-218ENST00000459667 ARHGEF25Q86VW2 580 aa28.84■■■□□ 2.21
VARS-218ENST00000459667 SEPT12Q8IYM1 358 aa28.84■■■□□ 2.21
VARS-218ENST00000459667 COL5A2P05997 1499 aaPredicted RBP28.84■■■□□ 2.21
VARS-218ENST00000459667 ONECUT3O60422 494 aaPredicted RBP28.83■■■□□ 2.21
VARS-218ENST00000459667 BRWD3Q6RI45 1802 aa28.83■■■□□ 2.21
VARS-218ENST00000459667 FAM98CQ17RN3 349 aaKnown RBP28.82■■■□□ 2.2
VARS-218ENST00000459667 POLR3GLQ9BT43 218 aa28.82■■■□□ 2.2
VARS-218ENST00000459667 SPATA31A1Q5TZJ5 1347 aa28.82■■■□□ 2.2
VARS-218ENST00000459667 A0A0G2JS52 829 aa28.81■■■□□ 2.2
VARS-218ENST00000459667 MYT1Q01538 1121 aa28.81■■■□□ 2.2
VARS-218ENST00000459667 UPF1Q92900 1129 aaKnown RBP eCLIP28.81■■■□□ 2.2
VARS-218ENST00000459667 LARP1Q6PKG0 1096 aaKnown RBP28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms