RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 PTPRTO14522 1441 aa13.22□□□□□ -0.29
RFC3P1-201ENST00000454568 MYO3AQ8NEV4 1616 aa13.21□□□□□ -0.29
RFC3P1-201ENST00000454568 PACS2Q86VP3 889 aa13.21□□□□□ -0.29
RFC3P1-201ENST00000454568 RRP7BPQ9NSQ0 103 aa13.21□□□□□ -0.29
RFC3P1-201ENST00000454568 TSR3Q9UJK0 312 aaKnown RBP13.21□□□□□ -0.29
RFC3P1-201ENST00000454568 NCOA1Q15788 1441 aa13.21□□□□□ -0.3
RFC3P1-201ENST00000454568 CEP170BQ9Y4F5 1589 aaPredicted RBP13.2□□□□□ -0.3
RFC3P1-201ENST00000454568 FAM50AQ14320 339 aaKnown RBP13.2□□□□□ -0.3
RFC3P1-201ENST00000454568 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
RFC3P1-201ENST00000454568 CHIC2Q9UKJ5 165 aa13.2□□□□□ -0.3
RFC3P1-201ENST00000454568 FGD6Q6ZV73 1430 aa13.2□□□□□ -0.3
RFC3P1-201ENST00000454568 TNRQ92752 1358 aa13.2□□□□□ -0.3
RFC3P1-201ENST00000454568 FAM135AQ9P2D6 1515 aa13.19□□□□□ -0.3
RFC3P1-201ENST00000454568 DDX12PQ92771 950 aa13.19□□□□□ -0.3
RFC3P1-201ENST00000454568 PZPP20742 1482 aa13.18□□□□□ -0.3
RFC3P1-201ENST00000454568 ABCC5O15440 1437 aa13.18□□□□□ -0.3
RFC3P1-201ENST00000454568 KIF15Q9NS87 1388 aa13.18□□□□□ -0.3
RFC3P1-201ENST00000454568 DUOX2Q9NRD8 1548 aa13.18□□□□□ -0.3
RFC3P1-201ENST00000454568 ZNF142P52746 1687 aaPredicted RBP13.18□□□□□ -0.3
RFC3P1-201ENST00000454568 EIF2AK4Q9P2K8 1649 aaKnown RBP13.17□□□□□ -0.3
RFC3P1-201ENST00000454568 DAPK1P53355 1430 aa13.17□□□□□ -0.3
RFC3P1-201ENST00000454568 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
RFC3P1-201ENST00000454568 CROCC2H7BZ55 1655 aa13.16□□□□□ -0.3
RFC3P1-201ENST00000454568 EN1Q05925 392 aaPredicted RBP13.16□□□□□ -0.3
RFC3P1-201ENST00000454568 HPS5Q9UPZ3 1129 aa13.16□□□□□ -0.3
RFC3P1-201ENST00000454568 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
RFC3P1-201ENST00000454568 DNMT1P26358 1616 aaKnown RBP13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 RNF17Q9BXT8 1623 aaKnown RBP13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 SPDYE16A6NNV3 312 aaPredicted RBP13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 MAP3K7O43318 606 aa13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 NBR1Q14596 966 aa13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 THEMISQ8N1K5 641 aaPredicted RBP13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 ANKRD30AQ9BXX3 1397 aa13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 PLA2R1Q13018 1463 aa13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 TCOF1Q13428 1488 aaKnown RBP13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 PDIA6Q15084 440 aa13.14□□□□□ -0.31
RFC3P1-201ENST00000454568 BBXQ8WY36 941 aaPredicted RBP13.14□□□□□ -0.31
RFC3P1-201ENST00000454568 ZC3H13Q5T200 1668 aaKnown RBP13.14□□□□□ -0.31
RFC3P1-201ENST00000454568 ABCC3O15438 1527 aa13.13□□□□□ -0.31
RFC3P1-201ENST00000454568 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
RFC3P1-201ENST00000454568 KANK1Q14678 1352 aa13.13□□□□□ -0.31
RFC3P1-201ENST00000454568 CEP152O94986 1710 aa13.13□□□□□ -0.31
RFC3P1-201ENST00000454568 ERBINQ96RT1 1412 aa13.13□□□□□ -0.31
RFC3P1-201ENST00000454568 ANKLE2Q86XL3 938 aa13.12□□□□□ -0.31
RFC3P1-201ENST00000454568 NLRP1Q9C000 1473 aa13.11□□□□□ -0.31
RFC3P1-201ENST00000454568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
RFC3P1-201ENST00000454568 PPARGC1BQ86YN6 1023 aaKnown RBP13.11□□□□□ -0.31
RFC3P1-201ENST00000454568 UGGT1Q9NYU2 1555 aa13.11□□□□□ -0.31
RFC3P1-201ENST00000454568 ZNF335Q9H4Z2 1342 aaPredicted RBP13.11□□□□□ -0.31
RFC3P1-201ENST00000454568 PPP4CP60510 307 aa13.1□□□□□ -0.31
RFC3P1-201ENST00000454568 LAPTM4AQ15012 233 aa13.1□□□□□ -0.31
RFC3P1-201ENST00000454568 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
RFC3P1-201ENST00000454568 Q6ZNB5 142 aa13.09□□□□□ -0.31
RFC3P1-201ENST00000454568 LTBP4Q8N2S1 1624 aa13.09□□□□□ -0.31
RFC3P1-201ENST00000454568 TSKSQ9UJT2 592 aa13.08□□□□□ -0.32
RFC3P1-201ENST00000454568 ERVK-7P63135 1459 aa13.08□□□□□ -0.32
RFC3P1-201ENST00000454568 POLR1AO95602 1720 aaPredicted RBP13.08□□□□□ -0.32
RFC3P1-201ENST00000454568 SPATA31D1Q6ZQQ2 1576 aa13.07□□□□□ -0.32
RFC3P1-201ENST00000454568 ITGAEP38570 1179 aa13.07□□□□□ -0.32
RFC3P1-201ENST00000454568 TSR1Q2NL82 804 aaKnown RBP13.07□□□□□ -0.32
RFC3P1-201ENST00000454568 PRDM15P57071 1507 aaPredicted RBP13.07□□□□□ -0.32
RFC3P1-201ENST00000454568 PRSS12P56730 875 aa13.05□□□□□ -0.32
RFC3P1-201ENST00000454568 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
RFC3P1-201ENST00000454568 DEPDC5O75140 1603 aa13.05□□□□□ -0.32
RFC3P1-201ENST00000454568 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
RFC3P1-201ENST00000454568 UBAP1LF5GYI3 381 aa13.04□□□□□ -0.32
RFC3P1-201ENST00000454568 NPHP4O75161 1426 aaPredicted RBP13.04□□□□□ -0.32
RFC3P1-201ENST00000454568 ANKRD50Q9ULJ7 1429 aa13.04□□□□□ -0.32
RFC3P1-201ENST00000454568 ADGRL2O95490 1459 aa13.04□□□□□ -0.32
RFC3P1-201ENST00000454568 IQSEC2Q5JU85 1478 aa13.04□□□□□ -0.32
RFC3P1-201ENST00000454568 NBPF26B4DH59 902 aa13.03□□□□□ -0.32
RFC3P1-201ENST00000454568 HDGFP51858 240 aaKnown RBP13.02□□□□□ -0.33
RFC3P1-201ENST00000454568 TXNDC2Q86VQ3 553 aa13.02□□□□□ -0.33
RFC3P1-201ENST00000454568 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
RFC3P1-201ENST00000454568 EID1Q9Y6B2 187 aa13.02□□□□□ -0.33
RFC3P1-201ENST00000454568 NEURL4Q96JN8 1562 aa13.02□□□□□ -0.33
RFC3P1-201ENST00000454568 E2F4Q16254 413 aa13.01□□□□□ -0.33
RFC3P1-201ENST00000454568 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.01□□□□□ -0.33
RFC3P1-201ENST00000454568 UBR1Q8IWV7 1749 aa13.01□□□□□ -0.33
RFC3P1-201ENST00000454568 SAMD7Q7Z3H4 446 aa13□□□□□ -0.33
RFC3P1-201ENST00000454568 NECTIN2Q92692 538 aa13□□□□□ -0.33
RFC3P1-201ENST00000454568 WDR70Q9NW82 654 aa13□□□□□ -0.33
RFC3P1-201ENST00000454568 ARIH1Q9Y4X5 557 aaPredicted RBP13□□□□□ -0.33
RFC3P1-201ENST00000454568 MED14O60244 1454 aa12.99□□□□□ -0.33
RFC3P1-201ENST00000454568 IDI1Q13907 227 aa12.99□□□□□ -0.33
RFC3P1-201ENST00000454568 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
RFC3P1-201ENST00000454568 LMTK2Q8IWU2 1503 aa12.98□□□□□ -0.33
RFC3P1-201ENST00000454568 PIK3C2BO00750 1634 aa12.98□□□□□ -0.33
RFC3P1-201ENST00000454568 CPS1P31327 1500 aa12.98□□□□□ -0.33
RFC3P1-201ENST00000454568 LTKP29376 864 aa12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 TATDN2Q93075 761 aa12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 BCANQ96GW7 911 aa12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 IL21Q9HBE4 155 aa12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 SLC52A1Q9NWF4 448 aa12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 RBM27Q9P2N5 1060 aaKnown RBP12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 VWDEQ8N2E2 1590 aa12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 ROCK1Q13464 1354 aa12.96□□□□□ -0.33
RFC3P1-201ENST00000454568 GRXCR2A6NFK2 248 aa12.96□□□□□ -0.33
RFC3P1-201ENST00000454568 TOM1O60784 492 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms