RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.67■□□□□ 0.9
VPS16-205ENST00000453689 PAK3O75914 559 aaPredicted RBP20.66■□□□□ 0.9
VPS16-205ENST00000453689 CABP1Q9NZU7 370 aa20.66■□□□□ 0.9
VPS16-205ENST00000453689 NRKQ7Z2Y5 1582 aa20.66■□□□□ 0.9
VPS16-205ENST00000453689 ZEB1P37275 1124 aaPredicted RBP20.65■□□□□ 0.9
VPS16-205ENST00000453689 ZNF772Q68DY9 489 aaPredicted RBP20.65■□□□□ 0.9
VPS16-205ENST00000453689 CABLES1Q8TDN4 633 aa20.65■□□□□ 0.9
VPS16-205ENST00000453689 TESK2Q96S53 571 aa20.65■□□□□ 0.9
VPS16-205ENST00000453689 NWD2Q9ULI1 1742 aa20.64■□□□□ 0.9
VPS16-205ENST00000453689 PLEKHG5O94827 1062 aa20.64■□□□□ 0.89
VPS16-205ENST00000453689 NGLY1Q96IV0 654 aa20.64■□□□□ 0.89
VPS16-205ENST00000453689 PIK3C2AO00443 1686 aa20.64■□□□□ 0.89
VPS16-205ENST00000453689 USP6P35125 1406 aa20.63■□□□□ 0.89
VPS16-205ENST00000453689 HAP1P54257 671 aaPredicted RBP20.62■□□□□ 0.89
VPS16-205ENST00000453689 BRD4O60885 1362 aaPredicted RBP20.6■□□□□ 0.89
VPS16-205ENST00000453689 COL14A1Q05707 1796 aaKnown RBP20.6■□□□□ 0.89
VPS16-205ENST00000453689 NRAPQ86VF7 1730 aa20.59■□□□□ 0.89
VPS16-205ENST00000453689 FNBP4Q8N3X1 1017 aaPredicted RBP20.59■□□□□ 0.89
VPS16-205ENST00000453689 CPSF1Q10570 1443 aaKnown RBP20.59■□□□□ 0.89
VPS16-205ENST00000453689 SSH2Q76I76 1423 aa20.59■□□□□ 0.89
VPS16-205ENST00000453689 SLIT2O94813 1529 aa20.58■□□□□ 0.88
VPS16-205ENST00000453689 BCL9LQ86UU0 1499 aa20.57■□□□□ 0.88
VPS16-205ENST00000453689 CD163L1Q9NR16 1453 aa20.57■□□□□ 0.88
VPS16-205ENST00000453689 SLC24A1O60721 1099 aa20.57■□□□□ 0.88
VPS16-205ENST00000453689 NUTM2GQ5VZR2 741 aa20.57■□□□□ 0.88
VPS16-205ENST00000453689 PUS7Q96PZ0 661 aaKnown RBP20.57■□□□□ 0.88
VPS16-205ENST00000453689 USP21Q9UK80 565 aa20.57■□□□□ 0.88
VPS16-205ENST00000453689 MYOM1P52179 1685 aa20.57■□□□□ 0.88
VPS16-205ENST00000453689 ABTB2Q8N961 1025 aa20.56■□□□□ 0.88
VPS16-205ENST00000453689 ZNF692Q9BU19 519 aaPredicted RBP20.55■□□□□ 0.88
VPS16-205ENST00000453689 QTRT2Q9H974 415 aaKnown RBP20.55■□□□□ 0.88
VPS16-205ENST00000453689 USP54Q70EL1 1684 aa20.54■□□□□ 0.88
VPS16-205ENST00000453689 ATRNO75882 1429 aa20.54■□□□□ 0.88
VPS16-205ENST00000453689 TMC1Q8TDI8 760 aa20.54■□□□□ 0.88
VPS16-205ENST00000453689 KTN1Q86UP2 1357 aaKnown RBP20.54■□□□□ 0.88
VPS16-205ENST00000453689 SOCS7O14512 581 aa20.53■□□□□ 0.88
VPS16-205ENST00000453689 TMF1P82094 1093 aa20.53■□□□□ 0.88
VPS16-205ENST00000453689 SLC12A5Q9H2X9 1139 aa20.53■□□□□ 0.88
VPS16-205ENST00000453689 USP19O94966 1318 aa20.53■□□□□ 0.88
VPS16-205ENST00000453689 RXRBP28702 533 aa20.52■□□□□ 0.88
VPS16-205ENST00000453689 SLIT3O75094 1523 aa20.52■□□□□ 0.87
VPS16-205ENST00000453689 TTC21BQ7Z4L5 1316 aa20.52■□□□□ 0.87
VPS16-205ENST00000453689 CDK12Q9NYV4 1490 aaPredicted RBP20.51■□□□□ 0.87
VPS16-205ENST00000453689 NINLQ9Y2I6 1382 aa20.51■□□□□ 0.87
VPS16-205ENST00000453689 FAM83GA6ND36 823 aa20.51■□□□□ 0.87
VPS16-205ENST00000453689 TRPC5Q9UL62 973 aaPredicted RBP20.51■□□□□ 0.87
VPS16-205ENST00000453689 NLRP13Q86W25 1043 aa20.5■□□□□ 0.87
VPS16-205ENST00000453689 TTC21AQ8NDW8 1320 aa20.5■□□□□ 0.87
VPS16-205ENST00000453689 RGPD5Q99666 1765 aa20.49■□□□□ 0.87
VPS16-205ENST00000453689 A0A1W2PP64 1363 aa20.49■□□□□ 0.87
VPS16-205ENST00000453689 LMO7Q8WWI1 1683 aa20.49■□□□□ 0.87
VPS16-205ENST00000453689 RBM6P78332 1123 aaKnown RBP20.49■□□□□ 0.87
VPS16-205ENST00000453689 HDGFL2Q7Z4V5 671 aaPredicted RBP20.49■□□□□ 0.87
VPS16-205ENST00000453689 UNC5CLQ8IV45 518 aa20.49■□□□□ 0.87
VPS16-205ENST00000453689 GLI3P10071 1580 aa20.49■□□□□ 0.87
VPS16-205ENST00000453689 KIAA0232Q92628 1395 aa20.48■□□□□ 0.87
VPS16-205ENST00000453689 NLRP6P59044 892 aa20.48■□□□□ 0.87
VPS16-205ENST00000453689 EDC4Q6P2E9 1401 aaKnown RBP20.47■□□□□ 0.87
VPS16-205ENST00000453689 EIF4G2P78344 907 aaKnown RBP eCLIP20.47■□□□□ 0.87
VPS16-205ENST00000453689 TERF2IPQ9NYB0 399 aa20.47■□□□□ 0.87
VPS16-205ENST00000453689 BRWD3Q6RI45 1802 aa20.47■□□□□ 0.87
VPS16-205ENST00000453689 LTN1O94822 1766 aa20.46■□□□□ 0.87
VPS16-205ENST00000453689 KIF20BQ96Q89 1820 aa20.46■□□□□ 0.87
VPS16-205ENST00000453689 RGS12O14924 1447 aa20.46■□□□□ 0.87
VPS16-205ENST00000453689 HSPA5P11021 654 aaKnown RBP20.46■□□□□ 0.87
VPS16-205ENST00000453689 ZC3H6P61129 1189 aaKnown RBP20.46■□□□□ 0.87
VPS16-205ENST00000453689 PRDM11Q9NQV5 511 aa20.46■□□□□ 0.87
VPS16-205ENST00000453689 COL18A1P39060 1754 aa20.46■□□□□ 0.87
VPS16-205ENST00000453689 CDCA8Q53HL2 280 aa20.45■□□□□ 0.86
VPS16-205ENST00000453689 GCP02774 474 aa20.44■□□□□ 0.86
VPS16-205ENST00000453689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.44■□□□□ 0.86
VPS16-205ENST00000453689 BTG4Q9NY30 223 aa20.44■□□□□ 0.86
VPS16-205ENST00000453689 CPDO75976 1380 aa20.44■□□□□ 0.86
VPS16-205ENST00000453689 ANKRD36BQ8N2N9 1353 aa20.44■□□□□ 0.86
VPS16-205ENST00000453689 CHRNA2Q15822 529 aa20.43■□□□□ 0.86
VPS16-205ENST00000453689 GJD4Q96KN9 370 aaPredicted RBP20.43■□□□□ 0.86
VPS16-205ENST00000453689 NFAT5O94916 1531 aa20.43■□□□□ 0.86
VPS16-205ENST00000453689 CAMTA1Q9Y6Y1 1673 aa20.42■□□□□ 0.86
VPS16-205ENST00000453689 VPS72Q15906 364 aa20.41■□□□□ 0.86
VPS16-205ENST00000453689 USP31Q70CQ4 1352 aa20.41■□□□□ 0.86
VPS16-205ENST00000453689 NME9Q86XW9 330 aa20.4■□□□□ 0.86
VPS16-205ENST00000453689 ZRANB1Q9UGI0 708 aa20.4■□□□□ 0.86
VPS16-205ENST00000453689 CCDC9Q9Y3X0 531 aaKnown RBP20.38■□□□□ 0.85
VPS16-205ENST00000453689 OVOS2A0A0J9YW53 1432 aa20.37■□□□□ 0.85
VPS16-205ENST00000453689 OVOS2Q6IE36 1432 aa20.37■□□□□ 0.85
VPS16-205ENST00000453689 KCNH5Q8NCM2 988 aa20.36■□□□□ 0.85
VPS16-205ENST00000453689 ZBTB7CA1YPR0 619 aa20.35■□□□□ 0.85
VPS16-205ENST00000453689 SOX12O15370 315 aa20.35■□□□□ 0.85
VPS16-205ENST00000453689 COL5A2P05997 1499 aaPredicted RBP20.35■□□□□ 0.85
VPS16-205ENST00000453689 WNK3Q9BYP7 1800 aa20.34■□□□□ 0.85
VPS16-205ENST00000453689 POLR3GLQ9BT43 218 aa20.34■□□□□ 0.85
VPS16-205ENST00000453689 STRN4Q9NRL3 753 aa20.34■□□□□ 0.85
VPS16-205ENST00000453689 THSD7AQ9UPZ6 1657 aa20.34■□□□□ 0.85
VPS16-205ENST00000453689 AATKQ6ZMQ8 1374 aa20.34■□□□□ 0.85
VPS16-205ENST00000453689 ANKRD26Q9UPS8 1709 aa20.33■□□□□ 0.85
VPS16-205ENST00000453689 ABCC6O95255 1503 aa20.33■□□□□ 0.85
VPS16-205ENST00000453689 SPATA31A5Q5VU36 1347 aa20.33■□□□□ 0.85
VPS16-205ENST00000453689 SPATA31A7Q8IWB4 1347 aa20.33■□□□□ 0.85
VPS16-205ENST00000453689 ARHGEF25Q86VW2 580 aa20.33■□□□□ 0.85
VPS16-205ENST00000453689 NSD3Q9BZ95 1437 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms