RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 THSD7AQ9UPZ6 1657 aa13.01□□□□□ -0.33
DEPDC1B-202ENST00000453022 KIAA1210Q9ULL0 1709 aa13.01□□□□□ -0.33
DEPDC1B-202ENST00000453022 DCAF11Q8TEB1 546 aa13.01□□□□□ -0.33
DEPDC1B-202ENST00000453022 KDM2AQ9Y2K7 1162 aa13.01□□□□□ -0.33
DEPDC1B-202ENST00000453022 RGPD1P0DJD0 1748 aa13□□□□□ -0.33
DEPDC1B-202ENST00000453022 TNS1Q9HBL0 1735 aaKnown RBP13□□□□□ -0.33
DEPDC1B-202ENST00000453022 DEFB132Q7Z7B7 95 aa13□□□□□ -0.33
DEPDC1B-202ENST00000453022 GPRASP1Q5JY77 1395 aa12.99□□□□□ -0.33
DEPDC1B-202ENST00000453022 WASLO00401 505 aaPredicted RBP12.99□□□□□ -0.33
DEPDC1B-202ENST00000453022 CCDC9Q9Y3X0 531 aaKnown RBP12.99□□□□□ -0.33
DEPDC1B-202ENST00000453022 KRT27Q7Z3Y8 459 aa12.98□□□□□ -0.33
DEPDC1B-202ENST00000453022 LRP5O75197 1615 aa12.98□□□□□ -0.33
DEPDC1B-202ENST00000453022 BTG4Q9NY30 223 aa12.98□□□□□ -0.33
DEPDC1B-202ENST00000453022 NRKQ7Z2Y5 1582 aa12.96□□□□□ -0.33
DEPDC1B-202ENST00000453022 FAM98CQ17RN3 349 aaKnown RBP12.96□□□□□ -0.33
DEPDC1B-202ENST00000453022 STAC3Q96MF2 364 aa12.95□□□□□ -0.34
DEPDC1B-202ENST00000453022 NGDNQ8NEJ9 315 aaKnown RBP12.94□□□□□ -0.34
DEPDC1B-202ENST00000453022 SPATA31A5Q5VU36 1347 aa12.94□□□□□ -0.34
DEPDC1B-202ENST00000453022 SPATA31A7Q8IWB4 1347 aa12.94□□□□□ -0.34
DEPDC1B-202ENST00000453022 A0A0G2JS52 829 aa12.94□□□□□ -0.34
DEPDC1B-202ENST00000453022 PAK3O75914 559 aaPredicted RBP12.94□□□□□ -0.34
DEPDC1B-202ENST00000453022 HRCP23327 699 aa12.94□□□□□ -0.34
DEPDC1B-202ENST00000453022 MYT1Q01538 1121 aa12.94□□□□□ -0.34
DEPDC1B-202ENST00000453022 SF3B2Q13435 895 aaKnown RBP12.94□□□□□ -0.34
DEPDC1B-202ENST00000453022 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
DEPDC1B-202ENST00000453022 QRICH2Q9H0J4 1663 aa12.93□□□□□ -0.34
DEPDC1B-202ENST00000453022 NUDT16Q96DE0 195 aaKnown RBP12.93□□□□□ -0.34
DEPDC1B-202ENST00000453022 POLR3AO14802 1390 aaPredicted RBP12.93□□□□□ -0.34
DEPDC1B-202ENST00000453022 KIAA0232Q92628 1395 aa12.93□□□□□ -0.34
DEPDC1B-202ENST00000453022 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
DEPDC1B-202ENST00000453022 PRDM11Q9NQV5 511 aa12.91□□□□□ -0.34
DEPDC1B-202ENST00000453022 CDK19Q9BWU1 502 aa12.9□□□□□ -0.34
DEPDC1B-202ENST00000453022 RREB1Q92766 1687 aa12.9□□□□□ -0.34
DEPDC1B-202ENST00000453022 BAG6P46379 1132 aa12.9□□□□□ -0.35
DEPDC1B-202ENST00000453022 CHRNA2Q15822 529 aa12.9□□□□□ -0.35
DEPDC1B-202ENST00000453022 DISP2A7MBM2 1401 aa12.89□□□□□ -0.35
DEPDC1B-202ENST00000453022 ACEP12821 1306 aa12.89□□□□□ -0.35
DEPDC1B-202ENST00000453022 SPATA31A1Q5TZJ5 1347 aa12.89□□□□□ -0.35
DEPDC1B-202ENST00000453022 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
DEPDC1B-202ENST00000453022 NUTM2GQ5VZR2 741 aa12.89□□□□□ -0.35
DEPDC1B-202ENST00000453022 NBPF1Q3BBV0 1214 aa12.88□□□□□ -0.35
DEPDC1B-202ENST00000453022 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
DEPDC1B-202ENST00000453022 PARP4Q9UKK3 1724 aaKnown RBP12.88□□□□□ -0.35
DEPDC1B-202ENST00000453022 PSDA5PKW4 1024 aaPredicted RBP12.87□□□□□ -0.35
DEPDC1B-202ENST00000453022 ZC3H6P61129 1189 aaKnown RBP12.87□□□□□ -0.35
DEPDC1B-202ENST00000453022 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
DEPDC1B-202ENST00000453022 NBPF8Q3BBV2 869 aa12.87□□□□□ -0.35
DEPDC1B-202ENST00000453022 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
DEPDC1B-202ENST00000453022 SSH2Q76I76 1423 aa12.87□□□□□ -0.35
DEPDC1B-202ENST00000453022 WNK3Q9BYP7 1800 aa12.87□□□□□ -0.35
DEPDC1B-202ENST00000453022 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
DEPDC1B-202ENST00000453022 PLEKHG3A1L390 1219 aa12.86□□□□□ -0.35
DEPDC1B-202ENST00000453022 STRN4Q9NRL3 753 aa12.86□□□□□ -0.35
DEPDC1B-202ENST00000453022 TRPM1Q7Z4N2 1603 aa12.86□□□□□ -0.35
DEPDC1B-202ENST00000453022 USP19O94966 1318 aa12.86□□□□□ -0.35
DEPDC1B-202ENST00000453022 PIK3C2AO00443 1686 aa12.85□□□□□ -0.35
DEPDC1B-202ENST00000453022 CPDO75976 1380 aa12.85□□□□□ -0.35
DEPDC1B-202ENST00000453022 COL18A1P39060 1754 aa12.84□□□□□ -0.35
DEPDC1B-202ENST00000453022 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
DEPDC1B-202ENST00000453022 SBF2Q86WG5 1849 aa12.84□□□□□ -0.35
DEPDC1B-202ENST00000453022 PEAK1Q9H792 1746 aa12.83□□□□□ -0.35
DEPDC1B-202ENST00000453022 COL5A2P05997 1499 aaPredicted RBP12.83□□□□□ -0.35
DEPDC1B-202ENST00000453022 SLIT3O75094 1523 aa12.83□□□□□ -0.36
DEPDC1B-202ENST00000453022 ABTB2Q8N961 1025 aa12.83□□□□□ -0.36
DEPDC1B-202ENST00000453022 USP35Q9P2H5 1018 aa12.83□□□□□ -0.36
DEPDC1B-202ENST00000453022 LRRC37A3O60309 1634 aa12.83□□□□□ -0.36
DEPDC1B-202ENST00000453022 CENPJQ9HC77 1338 aaPredicted RBP12.83□□□□□ -0.36
DEPDC1B-202ENST00000453022 RGPD5Q99666 1765 aa12.83□□□□□ -0.36
DEPDC1B-202ENST00000453022 TRIM37O94972 964 aa12.82□□□□□ -0.36
DEPDC1B-202ENST00000453022 EZH2Q15910 746 aaKnown RBP12.82□□□□□ -0.36
DEPDC1B-202ENST00000453022 SRPK2P78362 688 aaKnown RBP12.81□□□□□ -0.36
DEPDC1B-202ENST00000453022 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
DEPDC1B-202ENST00000453022 BARGINQ6ZT62 677 aa12.81□□□□□ -0.36
DEPDC1B-202ENST00000453022 CABP2Q9NPB3 220 aa12.81□□□□□ -0.36
DEPDC1B-202ENST00000453022 USP6P35125 1406 aa12.81□□□□□ -0.36
DEPDC1B-202ENST00000453022 R3HDM1Q15032 1099 aaKnown RBP12.81□□□□□ -0.36
DEPDC1B-202ENST00000453022 FAM196AQ6ZSG2 479 aa12.81□□□□□ -0.36
DEPDC1B-202ENST00000453022 CAMKK2Q96RR4 588 aa12.81□□□□□ -0.36
DEPDC1B-202ENST00000453022 RGPD3A6NKT7 1758 aaPredicted RBP12.8□□□□□ -0.36
DEPDC1B-202ENST00000453022 RGPD4Q7Z3J3 1758 aa12.8□□□□□ -0.36
DEPDC1B-202ENST00000453022 BRD4O60885 1362 aaPredicted RBP12.79□□□□□ -0.36
DEPDC1B-202ENST00000453022 PARD3Q8TEW0 1356 aa12.79□□□□□ -0.36
DEPDC1B-202ENST00000453022 GCP02774 474 aa12.79□□□□□ -0.36
DEPDC1B-202ENST00000453022 EVA1CP58658 441 aa12.79□□□□□ -0.36
DEPDC1B-202ENST00000453022 NLRP13Q86W25 1043 aa12.79□□□□□ -0.36
DEPDC1B-202ENST00000453022 TCP11L2Q8N4U5 519 aa12.78□□□□□ -0.36
DEPDC1B-202ENST00000453022 MON2Q7Z3U7 1717 aa12.78□□□□□ -0.36
DEPDC1B-202ENST00000453022 CRB1P82279 1406 aa12.78□□□□□ -0.36
DEPDC1B-202ENST00000453022 APBA3O96018 575 aa12.77□□□□□ -0.36
DEPDC1B-202ENST00000453022 PDE3BQ13370 1112 aa12.77□□□□□ -0.37
DEPDC1B-202ENST00000453022 L3MBTL2Q969R5 705 aa12.77□□□□□ -0.37
DEPDC1B-202ENST00000453022 CABP1Q9NZU7 370 aa12.77□□□□□ -0.37
DEPDC1B-202ENST00000453022 AATKQ6ZMQ8 1374 aa12.76□□□□□ -0.37
DEPDC1B-202ENST00000453022 THRAP3Q9Y2W1 955 aaKnown RBP12.76□□□□□ -0.37
DEPDC1B-202ENST00000453022 USP54Q70EL1 1684 aa12.75□□□□□ -0.37
DEPDC1B-202ENST00000453022 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
DEPDC1B-202ENST00000453022 NFAT5O94916 1531 aa12.74□□□□□ -0.37
DEPDC1B-202ENST00000453022 NLRP6P59044 892 aa12.74□□□□□ -0.37
DEPDC1B-202ENST00000453022 OVOS2A0A0G2JMS6 1433 aa12.74□□□□□ -0.37
DEPDC1B-202ENST00000453022 OVOS2A0A0J9YW53 1432 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms