RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 SHPRHQ149N8 1683 aa33.35■■■□□ 2.93
CPSF4-207ENST00000451876 HDGFL2Q7Z4V5 671 aaPredicted RBP33.34■■■□□ 2.93
CPSF4-207ENST00000451876 ZNF692Q9BU19 519 aaPredicted RBP33.34■■■□□ 2.93
CPSF4-207ENST00000451876 LRRC59Q96AG4 307 aaKnown RBP33.33■■■□□ 2.93
CPSF4-207ENST00000451876 SPATA31A3Q5VYP0 1347 aa33.33■■■□□ 2.93
CPSF4-207ENST00000451876 PIK3C2AO00443 1686 aa33.31■■■□□ 2.92
CPSF4-207ENST00000451876 PAK3O75914 559 aaPredicted RBP33.31■■■□□ 2.92
CPSF4-207ENST00000451876 COL22A1Q8NFW1 1626 aaPredicted RBP33.29■■■□□ 2.92
CPSF4-207ENST00000451876 EDC4Q6P2E9 1401 aaKnown RBP33.29■■■□□ 2.92
CPSF4-207ENST00000451876 PNPLA6Q8IY17 1366 aa33.29■■■□□ 2.92
CPSF4-207ENST00000451876 BRD4O60885 1362 aaPredicted RBP33.28■■■□□ 2.92
CPSF4-207ENST00000451876 JCADQ9P266 1359 aa33.27■■■□□ 2.92
CPSF4-207ENST00000451876 TTC21BQ7Z4L5 1316 aa33.27■■■□□ 2.92
CPSF4-207ENST00000451876 LMOD2Q6P5Q4 547 aa33.25■■■□□ 2.91
CPSF4-207ENST00000451876 CARD14Q9BXL6 1004 aa33.25■■■□□ 2.91
CPSF4-207ENST00000451876 ABCA3Q99758 1704 aa33.25■■■□□ 2.91
CPSF4-207ENST00000451876 MARF1Q9Y4F3 1742 aaKnown RBP33.25■■■□□ 2.91
CPSF4-207ENST00000451876 CRYBG1Q9Y4K1 1723 aa33.25■■■□□ 2.91
CPSF4-207ENST00000451876 PANK3Q9H999 370 aa33.24■■■□□ 2.91
CPSF4-207ENST00000451876 NSD3Q9BZ95 1437 aa33.23■■■□□ 2.91
CPSF4-207ENST00000451876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.23■■■□□ 2.91
CPSF4-207ENST00000451876 ARHGEF10O15013 1369 aa33.23■■■□□ 2.91
CPSF4-207ENST00000451876 KIF20BQ96Q89 1820 aa33.22■■■□□ 2.91
CPSF4-207ENST00000451876 MED1Q15648 1581 aaPredicted RBP33.21■■■□□ 2.91
CPSF4-207ENST00000451876 TTC21AQ8NDW8 1320 aa33.21■■■□□ 2.91
CPSF4-207ENST00000451876 NUTM2GQ5VZR2 741 aa33.2■■■□□ 2.9
CPSF4-207ENST00000451876 ABTB2Q8N961 1025 aa33.2■■■□□ 2.9
CPSF4-207ENST00000451876 USP54Q70EL1 1684 aa33.18■■■□□ 2.9
CPSF4-207ENST00000451876 PHRF1Q9P1Y6 1649 aaKnown RBP33.18■■■□□ 2.9
CPSF4-207ENST00000451876 ZNF316A6NFI3 1004 aaPredicted RBP33.18■■■□□ 2.9
CPSF4-207ENST00000451876 NME9Q86XW9 330 aa33.17■■■□□ 2.9
CPSF4-207ENST00000451876 PLEKHG5O94827 1062 aa33.17■■■□□ 2.9
CPSF4-207ENST00000451876 CABLES1Q8TDN4 633 aa33.14■■■□□ 2.9
CPSF4-207ENST00000451876 ZRANB1Q9UGI0 708 aa33.14■■■□□ 2.9
CPSF4-207ENST00000451876 LRP6O75581 1613 aa33.13■■■□□ 2.89
CPSF4-207ENST00000451876 NLRP6P59044 892 aa33.11■■■□□ 2.89
CPSF4-207ENST00000451876 SPATA31A6Q5VVP1 1343 aa33.11■■■□□ 2.89
CPSF4-207ENST00000451876 OVOS2A0A0J9YW53 1432 aa33.1■■■□□ 2.89
CPSF4-207ENST00000451876 OVOS2Q6IE36 1432 aa33.1■■■□□ 2.89
CPSF4-207ENST00000451876 ANKRD26Q9UPS8 1709 aa33.1■■■□□ 2.89
CPSF4-207ENST00000451876 USP31Q70CQ4 1352 aa33.09■■■□□ 2.89
CPSF4-207ENST00000451876 SLIT3O75094 1523 aa33.09■■■□□ 2.89
CPSF4-207ENST00000451876 FYB1O15117 783 aa33.09■■■□□ 2.89
CPSF4-207ENST00000451876 USP19O94966 1318 aa33.08■■■□□ 2.89
CPSF4-207ENST00000451876 PER1O15534 1290 aaPredicted RBP33.08■■■□□ 2.89
CPSF4-207ENST00000451876 NLRP13Q86W25 1043 aa33.08■■■□□ 2.89
CPSF4-207ENST00000451876 NUTM2BA6NNL0 878 aaPredicted RBP33.06■■■□□ 2.88
CPSF4-207ENST00000451876 NUTM2EB1AL46 878 aaPredicted RBP33.06■■■□□ 2.88
CPSF4-207ENST00000451876 NUTM2AQ8IVF1 878 aaPredicted RBP33.06■■■□□ 2.88
CPSF4-207ENST00000451876 CGNL1Q0VF96 1302 aa33.06■■■□□ 2.88
CPSF4-207ENST00000451876 GGNBP2Q9H3C7 697 aa33.06■■■□□ 2.88
CPSF4-207ENST00000451876 DDX10Q13206 875 aaKnown RBP33.05■■■□□ 2.88
CPSF4-207ENST00000451876 KNSTRNQ9Y448 316 aa33.04■■■□□ 2.88
CPSF4-207ENST00000451876 NFAT5O94916 1531 aa33■■■□□ 2.87
CPSF4-207ENST00000451876 HAP1P54257 671 aaPredicted RBP33■■■□□ 2.87
CPSF4-207ENST00000451876 AMER1Q5JTC6 1135 aaPredicted RBP32.99■■■□□ 2.87
CPSF4-207ENST00000451876 COG3Q96JB2 828 aa32.99■■■□□ 2.87
CPSF4-207ENST00000451876 ADAMTS2O95450 1211 aa32.98■■■□□ 2.87
CPSF4-207ENST00000451876 GCP02774 474 aa32.98■■■□□ 2.87
CPSF4-207ENST00000451876 SOX12O15370 315 aa32.97■■■□□ 2.87
CPSF4-207ENST00000451876 LTN1O94822 1766 aa32.96■■■□□ 2.87
CPSF4-207ENST00000451876 NSD2O96028 1365 aa32.96■■■□□ 2.87
CPSF4-207ENST00000451876 ZC3H6P61129 1189 aaKnown RBP32.92■■■□□ 2.86
CPSF4-207ENST00000451876 KIAA0232Q92628 1395 aa32.91■■■□□ 2.86
CPSF4-207ENST00000451876 PLCH1Q4KWH8 1693 aa32.91■■■□□ 2.86
CPSF4-207ENST00000451876 KCNH5Q8NCM2 988 aa32.91■■■□□ 2.86
CPSF4-207ENST00000451876 FBLN1P23142 703 aa32.9■■■□□ 2.86
CPSF4-207ENST00000451876 CC2D1BQ5T0F9 858 aaKnown RBP32.9■■■□□ 2.86
CPSF4-207ENST00000451876 NPC1L1Q9UHC9 1359 aa32.89■■■□□ 2.86
CPSF4-207ENST00000451876 COL14A1Q05707 1796 aaKnown RBP32.89■■■□□ 2.86
CPSF4-207ENST00000451876 CPDO75976 1380 aa32.89■■■□□ 2.85
CPSF4-207ENST00000451876 CNGB1Q14028 1251 aaPredicted RBP32.88■■■□□ 2.85
CPSF4-207ENST00000451876 MEX3CQ5U5Q3 659 aaKnown RBP32.88■■■□□ 2.85
CPSF4-207ENST00000451876 MAP2P11137 1827 aaKnown RBP32.87■■■□□ 2.85
CPSF4-207ENST00000451876 COL18A1P39060 1754 aa32.86■■■□□ 2.85
CPSF4-207ENST00000451876 LMO7Q8WWI1 1683 aa32.86■■■□□ 2.85
CPSF4-207ENST00000451876 C8orf37Q96NL8 207 aa32.86■■■□□ 2.85
CPSF4-207ENST00000451876 PRDM11Q9NQV5 511 aa32.84■■■□□ 2.85
CPSF4-207ENST00000451876 RGPD5Q99666 1765 aa32.84■■■□□ 2.85
CPSF4-207ENST00000451876 FAM83GA6ND36 823 aa32.84■■■□□ 2.85
CPSF4-207ENST00000451876 CHRNA2Q15822 529 aa32.84■■■□□ 2.85
CPSF4-207ENST00000451876 ARHGEF25Q86VW2 580 aa32.83■■■□□ 2.85
CPSF4-207ENST00000451876 ZBTB7CA1YPR0 619 aa32.82■■■□□ 2.84
CPSF4-207ENST00000451876 TNNT2P45379 298 aaPredicted RBP32.82■■■□□ 2.84
CPSF4-207ENST00000451876 MORC1Q86VD1 984 aa32.82■■■□□ 2.84
CPSF4-207ENST00000451876 NWD2Q9ULI1 1742 aa32.82■■■□□ 2.84
CPSF4-207ENST00000451876 PEAK1Q9H792 1746 aa32.81■■■□□ 2.84
CPSF4-207ENST00000451876 NRAPQ86VF7 1730 aa32.8■■■□□ 2.84
CPSF4-207ENST00000451876 SLIT2O94813 1529 aa32.8■■■□□ 2.84
CPSF4-207ENST00000451876 RRS1Q15050 365 aaKnown RBP32.8■■■□□ 2.84
CPSF4-207ENST00000451876 NGLY1Q96IV0 654 aa32.79■■■□□ 2.84
CPSF4-207ENST00000451876 MAP3K19Q56UN5 1328 aa32.78■■■□□ 2.84
CPSF4-207ENST00000451876 CAMTA1Q9Y6Y1 1673 aa32.78■■■□□ 2.84
CPSF4-207ENST00000451876 AATKQ6ZMQ8 1374 aa32.78■■■□□ 2.84
CPSF4-207ENST00000451876 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.75■■■□□ 2.83
CPSF4-207ENST00000451876 ABCC6O95255 1503 aa32.75■■■□□ 2.83
CPSF4-207ENST00000451876 AFF2P51816 1311 aa32.75■■■□□ 2.83
CPSF4-207ENST00000451876 FNBP4Q8N3X1 1017 aaPredicted RBP32.74■■■□□ 2.83
CPSF4-207ENST00000451876 BCL9LQ86UU0 1499 aa32.74■■■□□ 2.83
CPSF4-207ENST00000451876 BTG4Q9NY30 223 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms