RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 CD163L1Q9NR16 1453 aa11.53□□□□□ -0.56
CNOT4-207ENST00000451834 PLEKHH1Q9ULM0 1364 aa11.53□□□□□ -0.56
CNOT4-207ENST00000451834 RGPD5Q99666 1765 aa11.53□□□□□ -0.56
CNOT4-207ENST00000451834 NCAPD2Q15021 1401 aa11.53□□□□□ -0.56
CNOT4-207ENST00000451834 NINLQ9Y2I6 1382 aa11.52□□□□□ -0.56
CNOT4-207ENST00000451834 PPP1R15AO75807 674 aaPredicted RBP11.52□□□□□ -0.56
CNOT4-207ENST00000451834 USP31Q70CQ4 1352 aa11.52□□□□□ -0.57
CNOT4-207ENST00000451834 ATF3P18847 181 aa11.51□□□□□ -0.57
CNOT4-207ENST00000451834 ADAMTS7Q9UKP4 1686 aa11.51□□□□□ -0.57
CNOT4-207ENST00000451834 PLEKHG3A1L390 1219 aa11.49□□□□□ -0.57
CNOT4-207ENST00000451834 AATKQ6ZMQ8 1374 aa11.49□□□□□ -0.57
CNOT4-207ENST00000451834 CLSPNQ9HAW4 1339 aa11.49□□□□□ -0.57
CNOT4-207ENST00000451834 PLPPR3Q6T4P5 718 aa11.46□□□□□ -0.57
CNOT4-207ENST00000451834 CCDC125Q86Z20 511 aa11.46□□□□□ -0.57
CNOT4-207ENST00000451834 POTEAQ6S8J7 498 aa11.46□□□□□ -0.58
CNOT4-207ENST00000451834 PARD3Q8TEW0 1356 aa11.45□□□□□ -0.58
CNOT4-207ENST00000451834 MIER1Q8N108 512 aa11.45□□□□□ -0.58
CNOT4-207ENST00000451834 USP6P35125 1406 aa11.44□□□□□ -0.58
CNOT4-207ENST00000451834 ATAD2Q6PL18 1390 aa11.44□□□□□ -0.58
CNOT4-207ENST00000451834 TUBGCP6Q96RT7 1819 aa11.43□□□□□ -0.58
CNOT4-207ENST00000451834 PRR36Q9H6K5 1346 aa11.42□□□□□ -0.58
CNOT4-207ENST00000451834 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
CNOT4-207ENST00000451834 TIMELESSQ9UNS1 1208 aa11.42□□□□□ -0.58
CNOT4-207ENST00000451834 OVOS2A0A0J9YW53 1432 aa11.41□□□□□ -0.58
CNOT4-207ENST00000451834 OVOS2Q6IE36 1432 aa11.41□□□□□ -0.58
CNOT4-207ENST00000451834 VIRMAQ69YN4 1812 aaKnown RBP11.41□□□□□ -0.58
CNOT4-207ENST00000451834 RBM6P78332 1123 aaKnown RBP11.41□□□□□ -0.58
CNOT4-207ENST00000451834 VPS72Q15906 364 aa11.41□□□□□ -0.58
CNOT4-207ENST00000451834 BLMP54132 1417 aaPredicted RBP11.41□□□□□ -0.58
CNOT4-207ENST00000451834 TAF1LQ8IZX4 1826 aa11.41□□□□□ -0.58
CNOT4-207ENST00000451834 COL5A2P05997 1499 aaPredicted RBP11.41□□□□□ -0.58
CNOT4-207ENST00000451834 SMG6Q86US8 1419 aaKnown RBP11.4□□□□□ -0.58
CNOT4-207ENST00000451834 KIF24Q5T7B8 1368 aa11.4□□□□□ -0.59
CNOT4-207ENST00000451834 C11orf95C9JLR9 678 aaPredicted RBP11.39□□□□□ -0.59
CNOT4-207ENST00000451834 WASLO00401 505 aaPredicted RBP11.39□□□□□ -0.59
CNOT4-207ENST00000451834 KIF13BQ9NQT8 1826 aa11.39□□□□□ -0.59
CNOT4-207ENST00000451834 PIP4K2BP78356 416 aa11.39□□□□□ -0.59
CNOT4-207ENST00000451834 PSME1Q06323 249 aa11.38□□□□□ -0.59
CNOT4-207ENST00000451834 ZNF326Q5BKZ1 582 aaKnown RBP11.37□□□□□ -0.59
CNOT4-207ENST00000451834 AFF2P51816 1311 aa11.37□□□□□ -0.59
CNOT4-207ENST00000451834 MAP2P11137 1827 aaKnown RBP11.36□□□□□ -0.59
CNOT4-207ENST00000451834 C5P01031 1676 aa11.36□□□□□ -0.59
CNOT4-207ENST00000451834 COL5A3P25940 1745 aaPredicted RBP11.36□□□□□ -0.59
CNOT4-207ENST00000451834 TRPC5Q9UL62 973 aaPredicted RBP11.36□□□□□ -0.59
CNOT4-207ENST00000451834 BARGINQ6ZT62 677 aa11.35□□□□□ -0.59
CNOT4-207ENST00000451834 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
CNOT4-207ENST00000451834 EDC4Q6P2E9 1401 aaKnown RBP11.35□□□□□ -0.59
CNOT4-207ENST00000451834 TTC21AQ8NDW8 1320 aa11.35□□□□□ -0.59
CNOT4-207ENST00000451834 BTAF1O14981 1849 aa11.35□□□□□ -0.59
CNOT4-207ENST00000451834 UPF1Q92900 1129 aaKnown RBP eCLIP11.35□□□□□ -0.59
CNOT4-207ENST00000451834 TOGARAM1Q9Y4F4 1720 aa11.35□□□□□ -0.59
CNOT4-207ENST00000451834 RTL1A6NKG5 1358 aa11.34□□□□□ -0.59
CNOT4-207ENST00000451834 PHF8Q9UPP1 1060 aa11.34□□□□□ -0.59
CNOT4-207ENST00000451834 RGPD2P0DJD1 1756 aa11.34□□□□□ -0.59
CNOT4-207ENST00000451834 THRAP3Q9Y2W1 955 aaKnown RBP11.34□□□□□ -0.59
CNOT4-207ENST00000451834 SIPA1L3O60292 1781 aaPredicted RBP11.34□□□□□ -0.59
CNOT4-207ENST00000451834 PPIP5K1Q6PFW1 1433 aa11.34□□□□□ -0.59
CNOT4-207ENST00000451834 CFAP70Q5T0N1 1121 aa11.33□□□□□ -0.6
CNOT4-207ENST00000451834 UNC5CLQ8IV45 518 aa11.33□□□□□ -0.6
CNOT4-207ENST00000451834 BCANQ96GW7 911 aa11.32□□□□□ -0.6
CNOT4-207ENST00000451834 SPATA31A5Q5VU36 1347 aa11.32□□□□□ -0.6
CNOT4-207ENST00000451834 SPATA31A7Q8IWB4 1347 aa11.32□□□□□ -0.6
CNOT4-207ENST00000451834 ORAI2Q96SN7 254 aa11.32□□□□□ -0.6
CNOT4-207ENST00000451834 DOT1LQ8TEK3 1739 aa11.32□□□□□ -0.6
CNOT4-207ENST00000451834 ITGB4P16144 1822 aa11.32□□□□□ -0.6
CNOT4-207ENST00000451834 KIAA1551Q9HCM1 1747 aa11.31□□□□□ -0.6
CNOT4-207ENST00000451834 RXRBP28702 533 aa11.31□□□□□ -0.6
CNOT4-207ENST00000451834 NSD2O96028 1365 aa11.31□□□□□ -0.6
CNOT4-207ENST00000451834 UBR2Q8IWV8 1755 aa11.31□□□□□ -0.6
CNOT4-207ENST00000451834 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
CNOT4-207ENST00000451834 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
CNOT4-207ENST00000451834 CRB1P82279 1406 aa11.3□□□□□ -0.6
CNOT4-207ENST00000451834 TNS2Q63HR2 1409 aa11.3□□□□□ -0.6
CNOT4-207ENST00000451834 NGLY1Q96IV0 654 aa11.29□□□□□ -0.6
CNOT4-207ENST00000451834 PRAM1Q96QH2 718 aa11.29□□□□□ -0.6
CNOT4-207ENST00000451834 KRT28Q7Z3Y7 464 aa11.28□□□□□ -0.6
CNOT4-207ENST00000451834 GJD4Q96KN9 370 aaPredicted RBP11.27□□□□□ -0.6
CNOT4-207ENST00000451834 CENPJQ9HC77 1338 aaPredicted RBP11.27□□□□□ -0.61
CNOT4-207ENST00000451834 WAPLQ7Z5K2 1190 aa11.27□□□□□ -0.61
CNOT4-207ENST00000451834 CHGAP10645 457 aaKnown RBP11.26□□□□□ -0.61
CNOT4-207ENST00000451834 PHF23Q9BUL5 403 aaPredicted RBP11.26□□□□□ -0.61
CNOT4-207ENST00000451834 SCN11AQ9UI33 1791 aa11.26□□□□□ -0.61
CNOT4-207ENST00000451834 SPATA31A1Q5TZJ5 1347 aa11.26□□□□□ -0.61
CNOT4-207ENST00000451834 FOXD1Q16676 465 aa11.25□□□□□ -0.61
CNOT4-207ENST00000451834 DLEC1Q9Y238 1755 aa11.25□□□□□ -0.61
CNOT4-207ENST00000451834 ANO8Q9HCE9 1232 aaPredicted RBP11.25□□□□□ -0.61
CNOT4-207ENST00000451834 CCDC61Q9Y6R9 512 aa11.25□□□□□ -0.61
CNOT4-207ENST00000451834 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
CNOT4-207ENST00000451834 CCDC7Q96M83 1385 aa11.24□□□□□ -0.61
CNOT4-207ENST00000451834 UBR3Q6ZT12 1888 aa11.23□□□□□ -0.61
CNOT4-207ENST00000451834 MAP3K5Q99683 1374 aa11.23□□□□□ -0.61
CNOT4-207ENST00000451834 ARFGEF2Q9Y6D5 1785 aa11.23□□□□□ -0.61
CNOT4-207ENST00000451834 NUTM2DQ5VT03 806 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-207ENST00000451834 ANKRD36BQ8N2N9 1353 aa11.23□□□□□ -0.61
CNOT4-207ENST00000451834 MRC1P22897 1456 aa11.23□□□□□ -0.61
CNOT4-207ENST00000451834 NUDT16Q96DE0 195 aaKnown RBP11.23□□□□□ -0.61
CNOT4-207ENST00000451834 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
CNOT4-207ENST00000451834 BRCA1P38398 1863 aaKnown RBP11.22□□□□□ -0.61
CNOT4-207ENST00000451834 USP21Q9UK80 565 aa11.22□□□□□ -0.61
CNOT4-207ENST00000451834 TMEM132EQ6IEE7 984 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms